16755 Mpv17_PMP22
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
16755 chr_2 Mpv17_PMP22 655423 657321 - Mpv17_PMP22

Synonyms

NCBI ID Ensembl Genomes exon ID
7450188 Thaps16755.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0456

Most Highly Correlated Transcripts

13448

Sec1
0.9236

37118

FeThRed_B
0.9012

16114

PLN02350
0.8976

35136

NA
0.89

21271

hypothetical protein
0.8845

261627

(GPX2) GSH_Peroxidase
0.882

31372

BT1
0.881

3693

SWIB
0.8809

22900

hypothetical protein
0.8737

269624

TIM_phosphate_binding superfamily
0.8735

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Mpv17_PMP22 superfamily Mpv17 / PMP22 family; The 22-kDa peroxisomal membrane protein (PMP22) is a major component of... - 70.3372 8.48E-15 436 - 502 superfamily 252388
Mpv17_PMP22 superfamily Mpv17 / PMP22 family; The 22-kDa peroxisomal membrane protein (PMP22) is a major component of... - 70.3372 8.48E-15 436 - 502 superfamily 252388

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8963 PHATRDRAFT_8963 185852 261469 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Peroxisome map04146

GO Terms

GO:0005215 GO:0006810 GO:0016020 GO:0016021 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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