20865 DUF1162 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20865	chr_1	DUF1162 superfamily	1730713	1741414	-	DUF1162 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445159	Thaps20865.10, Thaps20865.9, Thaps20865.2, Thaps20865.8, Thaps20865.11, Thaps20865.1, Thaps20865.4, Thaps20865.6, Thaps20865.3, Thaps20865.7, Thaps20865.5

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0128

Most Highly Correlated Transcripts

21268 zf-CXXC 0.9543	16613 S_TKc 0.9405	261045 PI3Kc_like superfamily 0.9385	21997 TPR_12 0.9369	29057 P-ATPase-V 0.9328	262371 AAA_12 superfamily 0.9319
25288 Sec6 superfamily 0.9298	8535 hypothetical protein 0.9274	22620 (Tp_AP2-EREBP1) regulator [Rayko] 0.9257	6207 hypothetical protein 0.9249

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF1162 superfamily		Protein of unknown function (DUF1162); This family represents a conserved region within several...	-	83.89	4.09E-17	1892 - 2184	superfamily	253843

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43220	PHATRDRAFT_43220	179531	318867	457507	Not available	Not available	519469

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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