22808 SpoU_methylase superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
22808 chr_5 SpoU_methylase superfamily 1511459 1517595 - SpoU_methylase superfamily
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0231
Normalized Mean Residue
Thaps_bicluster_0162
0.37
(bd1828) NA
0.9367
BcrAD_BadFG superfamily
0.9043
(VTS1) PTZ00419
0.8823
PRK05385
0.8722
(RPA1) RNAP_I_RPA1_N
0.8692
hypothetical protein
0.8644
hypothetical protein
0.8634
PLN03206
0.8603
D123 superfamily
0.8537
Urb2 superfamily
0.853
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SpoU_methylase superfamily SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet. - 94.1132 1.39E-21 1792 - 1935 superfamily 266618
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8000 PHATRDRAFT_8000 181295 189360 Not available Cre01.g027350.t1.2 AT4G17610.1 495108
KEGG description KEGG Pathway
Not available Not available
GO:0003723 GO:0006396 GO:0008173 -

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

RNA processing

Details: 
Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
GO Category: 
BP

RNA methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.
GO Category: 
MF
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