22854 PTS_2-RNA
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
22854 chr_5 PTS_2-RNA 1738917 1739943 - PTS_2-RNA
NCBI ID Ensembl Genomes exon ID
7448196 Thaps22854.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0228
Normalized Mean Residue
Thaps_bicluster_0259
0.35
hypothetical protein
0.8827
hypothetical protein
0.8794
IF4E
0.874
PTZ00368
0.8734
hypothetical protein
0.8705
0.8634
COG1054
0.8628
Peptidase_C15 superfamily
0.8598
HP_PGM_like
0.8597
hypothetical protein
0.8578
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PTS_2-RNA RNA 2'-phosphotransferase, Tpt1 / KptA family; Tpt1 catalyses the last step of tRNA... cl19470 172.342 1.60E-52 55 - 292 specific 250941
PTS_2-RNA superfamily RNA 2'-phosphotransferase, Tpt1 / KptA family; Tpt1 catalyses the last step of tRNA... - 172.342 1.60E-52 55 - 292 superfamily 267823
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_21228 PHATRDRAFT_21228 162092 296640 461661 Not available AT2G45330.1 516787
KEGG description KEGG Pathway
Not available Not available
GO:0006388 GO:0016772 -

tRNA splicing, via endonucleolytic cleavage and ligation

Details: 
Splicing of tRNA substrates via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons.
GO Category: 
BP

transferase activity, transferring phosphorus-containing groups

Details: 
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
GO Category: 
MF
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