23576 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23576 chr_7 HA 1543291 1545634 - HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7447151 Thaps23576.2, Thaps23576.3, Thaps23576.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0301

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0170
 0.34

Most Highly Correlated Transcripts

bd1885

(bd1885) NA
0.9445

21085

hypothetical protein
0.9195

269115

hypothetical protein
0.8922

21656

hypothetical protein
0.892

19048

S_TKc
0.8704

586

PTZ00018
0.8647

21559

hypothetical protein
0.8565

6635

hypothetical protein
0.8538

25372

hypothetical protein
0.8479

25381

hypothetical protein
0.845

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 67.3305 5.82E-14 452 - 516 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 67.3305 5.82E-14 452 - 516 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 67.3305 5.82E-14 452 - 516 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 67.3305 5.82E-14 452 - 516 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49763 PHATRDRAFT_49763 232668 209618 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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