2454 V-SNARE_C superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
2454 chr_2 V-SNARE_C superfamily 1048532 1049396 - V-SNARE_C superfamily
NCBI ID Ensembl Genomes exon ID
7444639 Thaps2454.3, Thaps2454.2, Thaps2454.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0156
Normalized Mean Residue
Thaps_bicluster_0121
0.36
TPT
0.914
0.9095
hypothetical protein
0.9084
GRX_GRXh_1_2_like
0.8946
GRX_PICOT_like
0.8729
FBPase
0.872
hypothetical protein
0.8708
Aldolase_Class_I superfamily
0.8693
hypothetical protein
0.8659
GRX_GRXh_1_2_like
0.8647
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
V-SNARE_C superfamily Snare region anchored in the vesicle membrane C-terminus; Within the SNARE proteins interactions in... - 57.2225 1.35E-11 120 - 184 superfamily 152787
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_52139 PHATRDRAFT_52139 200135 285361 253095 Cre12.g554200.t1.1 AT5G50440.1 Not available
KEGG description KEGG Pathway
SNARE interactions in vesicular transport map04130
GO:0006886 GO:0016021 -

intracellular protein transport

Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO Category: 
BP

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC
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