24977 TRAUB superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24977	chr_15	TRAUB superfamily	242888	244711	-	TRAUB superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444306	Thaps24977.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0326

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0192	0.36	540 1900

Most Highly Correlated Transcripts

bd1840 (bd1840) NA 0.9256	4408 hypothetical protein 0.9079	bd1756 (bd1756) NA 0.8906	26022 Pam16 superfamily 0.8893	bd1934 (bd1934) NA 0.886	35041 COG1094 0.879
22721 hypothetical protein 0.8736	bd1839 (bd1839) NA 0.8726	41979 PRK06116 0.8718	37928 PLN03238 0.8713

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TRAUB superfamily		Apoptosis-antagonizing transcription factor, C-terminal; This C terminal domain is found in traube...	-	64.943	2.36E-13	340 - 386	superfamily	254641

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_32646	PHATRDRAFT_32646	195087	199122	Not available	Not available	Not available	566444

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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