261661 (RM4) Ribosomal_L4
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
261661 chr_3 (RM4) Ribosomal_L4 311661 312575 + Ribosomal_L4
NCBI ID Ensembl Genomes exon ID
7441738 Thaps261661.2, Thaps261661.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0271
Aldolase_II superfamily
0.8999
hypothetical protein
0.8954
rpsI
0.8944
PHF5
0.8901
nascent-polypeptide-associated complex alpha polypeptide-like protein
0.885
hypothetical protein
0.8848
CCC1_like superfamily
0.8819
DUF3611 superfamily
0.8769
Ribosomal_L7_L12
0.8753
0.8735
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L4 Ribosomal protein L4/L1 family; This family includes Ribosomal L4/L1 from eukaryotes and... cl00325 202.325 1.84E-64 70 - 264 specific 249969
Ribosomal_L4 superfamily Ribosomal protein L4/L1 family; This family includes Ribosomal L4/L1 from eukaryotes and... - 202.325 1.84E-64 70 - 264 superfamily 260356
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12238 PHATRDRAFT_12238 162426 20247 227547 Cre12.g520400.t1.2 AT2G20060.1 552366
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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