262332 Chloroa_b-bind superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
262332	chr_4	Chloroa_b-bind superfamily	2180778	2181352	+	Chloroa_b-bind superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Thaps262332.2, Thaps262332.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0022

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0223	0.11	0.0000034 0.000084

Most Highly Correlated Transcripts

4883 (Lhcr14) fucoxanthin chlorophyll a/c light-harvesting protein, lhcr type 1	bd1160 (bd1160) Chloroa_b-bind superfamily 0.9933	bd218 (bd218) Chloroa_b-bind superfamily 0.9928	3816 (Lhcr7) fucoxanthin chl a/c light-harvesting protein 0.9898	bd1820 (bd1820) Fasciclin 0.9865	4882 (Lhcr4) fucoxanthin chl a/c light-harvesting protein 0.9817
270222 0.9817	40747 Chloroa_b-bind 0.9814	38122 Chloroa_b-bind superfamily 0.9799	23808 hypothetical protein 0.9792

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Chloroa_b-bind superfamily		Chlorophyll A-B binding protein; Chlorophyll A-B binding protein.	-	98.6016	7.86E-26	13 - 159	superfamily	261492

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_54027	PHATRDRAFT_54027	261294	263274	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0009765 GO:0016020 -

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