262699 YgdL_like
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
262699 chr_6 YgdL_like 294830 296568 - YgdL_like
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0231
Normalized Mean Residue
Thaps_bicluster_0188
0.22
hypothetical protein
0.9429
TrmA
0.9325
hypothetical protein
0.9121
hypothetical protein
0.9034
Pkinase
0.9019
hypothetical protein
0.9007
PRK05385
0.9006
PRK14333
0.9006
MPP_superfamily superfamily
0.9001
PRK00142
0.8958
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical... cl17196 249.829 5.50E-80 85 - 324 specific 238384
E1_enzyme_family superfamily Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes... - 249.829 5.50E-80 85 - 324 superfamily 266547
COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [... - 212.928 2.90E-65 59 - 324 multi-dom 224100
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_41002 PHATRDRAFT_41002 225801 194318 102870 Cre03.g159400.t1.2 AT5G37530.1 468262
KEGG description KEGG Pathway
Not available Not available
GO:0003824 GO:0004842 -

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF
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