26393 (ubc1) UBCc
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
26393 chr_12 (ubc1) UBCc 481218 482559 + UBCc
NCBI ID Ensembl Genomes exon ID
7445823 Thaps26393.1, Thaps26393.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0274
Normalized Mean Residue
Thaps_bicluster_0191
0.44
Cis_IPPS
0.9163
SAICAR_synt_Sc
0.913
GRX_PICOT_like
0.9068
(bd1806) AAT_I superfamily
0.9036
(GGTB1) PLN03201
0.9013
Tim17
0.9004
TRX_reduct
0.8989
HCO3_cotransp superfamily
0.8971
hypothetical protein
0.8945
S1_Rrp4
0.892
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBCc Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... cl00154 196.654 1.12E-64 17 - 145 specific 238117
UBCc superfamily Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated... - 196.654 1.12E-64 17 - 145 superfamily 260221
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_26750 PHATRDRAFT_26750 223245 302736 445078 Cre06.g294850.t1.2 AT2G02760.1 354949
KEGG description KEGG Pathway
Ubiquitin mediated proteolysis map04120
GO:0004840 GO:0006464 GO:0006512 GO:0004842 -

NA

Details: 
NA
GO Category: 
NA

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF
Log in to post comments