268460 PolY superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
268460 chr_3 PolY superfamily 801023 805042 + PolY superfamily
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0122
Normalized Mean Residue
Thaps_bicluster_0103
0.42
VPS9 superfamily
0.9036
VacB
0.8978
(SDH) GcvT
0.8974
hypothetical protein
0.8947
(bd1839) NA
0.8939
hypothetical protein
0.8909
(bd1841) CAP10 superfamily
0.8885
hypothetical protein
0.885
hypothetical protein
0.8848
hypothetical protein
0.8807
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PolY superfamily Y-family of DNA polymerases; Y-family DNA polymerases are a specialized subset of polymerases that... - 338.519 1.30E-104 511 - 929 superfamily 264514
DinP Nucleotidyltransferase/DNA polymerase involved in DNA repair [DNA replication, recombination, and... - 192.14 1.98E-53 550 - 936 multi-dom 223466
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49385 PHATRDRAFT_49385 214190 66308 248194 Cre12.g550800.t1.1 AT5G44750.1 317799
KEGG description KEGG Pathway
Not available Not available
GO:0006281 GO:0005622 GO:0003720 GO:0003724 GO:0003896 GO:0004779 GO:0008192 GO:0008193 GO:0008723 GO:0008905 GO:0016779 GO:0017103 -

DNA repair

Details: 
The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO Category: 
BP

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

telomerase activity

Details: 
Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes extension of the 3'- end of a DNA strand by one deoxynucleotide at a time using an internal RNA template that encodes the telomeric repeat sequence.
GO Category: 
MF

RNA helicase activity

Details: 
Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a RNA helix.
GO Category: 
MF

DNA primase activity

Details: 
Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. Catalyzed by a DNA-directed RNA polymerase that forms a complex with alpha DNA polymerase.
GO Category: 
MF

sulfate adenylyltransferase activity

Details: 
Catalysis of the transfer of an adenylyl group from an adenosine nucleotide (ATP or ADP) to sulfate, forming adenylylsulfate.
GO Category: 
MF

RNA guanylyltransferase activity

Details: 
Catalysis of the posttranscriptional addition of a guanyl residue to the 5' end of an RNA molecule.
GO Category: 
MF

tRNA guanylyltransferase activity

Details: 
Catalysis of the posttranscriptional addition of a guanyl residue to the 5' end of a tRNA molecule; observed for His tRNAs.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA

mannose-phosphate guanylyltransferase activity

Details: 
Catalysis of the transfer of a phosphate group from GTP or GDP to a mannose molecule.
GO Category: 
MF

nucleotidyltransferase activity

Details: 
Catalysis of the transfer of a nucleotidyl group to a reactant.
GO Category: 
MF

UTP:galactose-1-phosphate uridylyltransferase activity

Details: 
Catalysis of the reaction: alpha-D-galactose 1-phosphate + UTP = diphosphate + UDP-D-galactose.
GO Category: 
MF
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