269765 RluA
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
269765 chr_14 RluA 470430 471835 - RluA
NCBI ID Ensembl Genomes exon ID
7452675 Thaps269765.1, Thaps269765.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0039
Normalized Mean Residue
Thaps_bicluster_0235
0.25
hypothetical protein
0.9368
RpsA
0.9091
hypothetical protein
0.9087
(rpl34) ribosomal protein L34
0.9067
Ribosomal_L10
0.8975
(bd997) rpoC1
0.8923
hypothetical protein
0.8909
hypothetical protein
0.8887
(LEUS) PLN02563
0.8858
(rpl34) ribosomal protein L34
0.8829
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PseudoU_synth_RluCD_like Pseudouridine synthase, RsuA/RluD family; This group is comprised of eukaryotic, bacterial and... cl00130 160.196 1.69E-47 78 - 265 specific 211346
PseudoU_synth superfamily Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to... - 160.196 1.69E-47 78 - 265 superfamily 260207
RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] - 195.607 7.42E-60 68 - 329 multi-dom 223638
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_10284 PHATR_10284 197171 191875 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003723 GO:0006396 GO:0009982 GO:0016439 -

RNA binding

Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO Category: 
MF

RNA processing

Details: 
Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
GO Category: 
BP

pseudouridine synthase activity

Details: 
Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA
Log in to post comments