29314 Peptidase_M17
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
29314 chr_9 Peptidase_M17 519748 520902 - Peptidase_M17

Synonyms

NCBI ID Ensembl Genomes exon ID
7443544 Thaps29314.1, Thaps29314.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0014

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0125
 0.41

Most Highly Correlated Transcripts

bd718

(bd718) PRK10387
0.9308

3463

hypothetical protein
0.9027

bd1306

(bd1306) NA
0.9011

28326

lytB_ispH
0.8964

38306

Chloroa_b-bind
0.8903

bd208

(bd208) DUF3529
0.888

bd1820

(bd1820) Fasciclin
0.8788

bd1161

(bd1161) NA
0.8788

268343

NA
0.8773

32053

PRK08661
0.874

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_M17 superfamily Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and... - 340.293 1.31E-114 1 - 261 superfamily 238247
Peptidase_M17 superfamily Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and... - 340.293 1.31E-114 1 - 261 superfamily 238247

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_1884 PHATRDRAFT_1884 195199 192561 418804 Cre01.g007700.t1.1 AT2G24200.3 353200

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004177 GO:0005622 GO:0006508 GO:0004178 -

GO:0004177

aminopeptidase activity

Details: 
Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain.
GO Category: 
MF

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0004178

NA

Details: 
NA
GO Category: 
NA

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