29936 MCM
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
29936 chr_14 MCM 160766 163638 + MCM
NCBI ID Ensembl Genomes exon ID
7450833 Thaps29936.3, Thaps29936.1, Thaps29936.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0373
Normalized Mean Residue
Thaps_bicluster_0003
0.47
(bd1161) NA
0.8793
HCO3_cotransp superfamily
0.8583
Aldolase_II superfamily
0.8574
ATS1
0.851
UAA
0.8421
Abhydrolase_5
0.8379
MCM
0.8351
SAICAR_synt_Sc
0.8346
hypothetical protein
0.8233
(bd298) ABM superfamily
0.8222
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MCM_N superfamily MCM N-terminal domain; This family contains the N-terminal region of MCM proteins. This region is... - 98.0576 9.78E-24 93 - 233 superfamily 258689
MCM_N superfamily MCM N-terminal domain; This family contains the N-terminal region of MCM proteins. This region is... - 98.0576 9.78E-24 93 - 233 superfamily 258689
MCM minichromosome maintenance proteins; minichromosome maintenance proteins. - 661.65 0 216 - 746 multi-dom 214631
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_18622 PHATRDRAFT_18622 204899 209470 62542 Cre07.g338000.t1.2 AT1G44900.1 480390
KEGG description KEGG Pathway
DNA replication map03030
GO:0003677 GO:0005524 GO:0006270 GO:0008094 GO:0005634 GO:0004003 GO:0004004 GO:0008026 GO:0008186 GO:0015462 GO:0015616 GO:0016887 GO:0017116 GO:0042623 GO:0042624 GO:0042625 GO:0042626 -

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

DNA replication initiation

Details: 
The process in which DNA-dependent DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action.
GO Category: 
BP

DNA-dependent ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of single- or double-stranded DNA, and it drives another reaction.
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

ATP-dependent DNA helicase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of the DNA helix.
GO Category: 
MF

ATP-dependent RNA helicase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of an RNA helix.
GO Category: 
MF

ATP-dependent helicase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.
GO Category: 
MF

RNA-dependent ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of RNA, and it drives another reaction.
GO Category: 
MF

protein-transmembrane transporting ATPase activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + protein(out) = ADP + phosphate + protein(in).
GO Category: 
MF

DNA translocase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive movement along a single- or double-stranded DNA molecule.
GO Category: 
MF

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

single-stranded DNA-dependent ATP-dependent DNA helicase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of a DNA helix.
GO Category: 
MF

ATPase activity, coupled

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction directly drives some other reaction, for example ion transport across a membrane.
GO Category: 
MF

ATPase activity, uncoupled

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction is not directly coupled to any other reaction.
GO Category: 
MF

ATPase activity, coupled to transmembrane movement of ions

Details: 
Catalysis of the transfer of an ion from one side of a membrane to the other, driven by the reaction: ATP + H2O = ADP + phosphate.
GO Category: 
MF

ATPase activity, coupled to transmembrane movement of substances

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane.
GO Category: 
MF
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