31226 Sugar_tr
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31226 chr_1 Sugar_tr 1073789 1075189 + Sugar_tr

Synonyms

NCBI ID Ensembl Genomes exon ID
7446823 Thaps31226.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0401

Most Highly Correlated Transcripts

4482

hypothetical protein
0.8808

10379

hypothetical protein
0.8666

10925

hypothetical protein
0.8597

263599

COG3899
0.8519

bd410

(bd410) HNHc
0.8511

10474

hypothetical protein
0.8487

10564

DadA
0.8469

262157

E1_like_apg7
0.8461

8445

hypothetical protein
0.8439

4565

hypothetical protein
0.8436

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 99.3104 2.72E-23 7 - 417 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 99.3104 2.72E-23 7 - 417 superfamily 119392
Sugar_tr Sugar (and other) transporter; Sugar (and other) transporter. - 133.195 2.23E-34 26 - 432 multi-dom 249572

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45672 PHATRDRAFT_45672 276011 260965 463437 Not available AT3G13050.1 506430

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016021 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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