31259 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31259 chr_1 HA 1256723 1258069 + HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7449125 Thaps31259.2, Thaps31259.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0292

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0196
 0.36

Most Highly Correlated Transcripts

268443

SAICAR_synt_Sc
0.9252

267979

HCO3_cotransp superfamily
0.9223

22627

hypothetical protein
0.9188

30980

EngA2
0.9094

268859

(GGTB1) PLN03201
0.9035

20930

DRE_TIM_metallolyase superfamily
0.8952

4517

hypothetical protein
0.8944

5053

hypothetical protein
0.8935

4574

hypothetical protein
0.8917

38466

SpoU_methylase superfamily
0.8887

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 59.2413 2.00E-11 191 - 253 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 59.2413 2.00E-11 191 - 253 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 59.2413 2.00E-11 191 - 253 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 59.2413 2.00E-11 191 - 253 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43489 PHATRDRAFT_43489 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments