31451 rplO
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
31451 chr_1 rplO 1886848 1887508 - rplO
NCBI ID Ensembl Genomes exon ID
7449783 Thaps31451.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0039
Normalized Mean Residue
Thaps_bicluster_0235
0.25
Ribosomal_L10
0.963
(RK17) rplQ
0.9264
hypothetical protein
0.922
RpsA
0.9202
(bd1652) ABC_ATPase superfamily
0.9126
(RK28) Ribosomal_L28
0.9121
Chorismate_synthase
0.9046
hypothetical protein
0.8988
PLN02321
0.8983
FIG superfamily
0.8963
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
rplO 50S ribosomal protein L15; Reviewed cl12022 172.971 1.94E-54 59 - 209 specific 235523
Ribosomal_L18e superfamily Ribosomal protein L18e/L15; This family includes eukaryotic L18 as well as prokaryotic L15. - 172.971 1.94E-54 59 - 209 superfamily 264513
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_10774 PHATRDRAFT_10774 207376 70521 457670 Cre14.g612450.t1.2 AT3G25920.1 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003735 GO:0005622 GO:0005840 GO:0006412 GO:0015934 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP

large ribosomal subunit

Details: 
The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
GO Category: 
CC
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