3183 PTZ00018
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
3183 chr_3 PTZ00018 338699 339210 - PTZ00018
NCBI ID Ensembl Genomes exon ID
7444007 Thaps3183.1, Thaps3183.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0095
Normalized Mean Residue
Thaps_bicluster_0207
0.30
PLN00158
0.9618
PTZ00018
0.9578
PLN00157
0.943
PTZ00018
0.9412
PLN00158
0.9366
PLN00157
0.9309
H15
0.9307
(bd950) NA
0.929
(bd843) NA
0.9288
(bd951) NA
0.9013
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
H3 Histone H3; Histone H3. cl00074 181.877 1.31E-59 34 - 135 specific 128705
H4 superfamily Histone H4, one of the four histones, along with H2A, H2B and H3, which forms the eukaryotic... - 181.877 1.31E-59 34 - 135 superfamily 260174
PTZ00018 histone H3; Provisional - 258.296 2.52E-89 1 - 136 multi-dom 185400
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
27688 PHATRDRAFT_50872 PHATRDRAFT_50872 203578 50352 77317 Cre12.g504800.t1.2 Not available 284752
KEGG description KEGG Pathway
Not available Not available
GO:0000786 GO:0003677 GO:0005634 GO:0006334 GO:0007001 -

nucleosome

Details: 
A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.
GO Category: 
CC

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

nucleosome assembly

Details: 
The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA
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