36406 Ribosomal_L7_archeal_euk
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
36406 chr_10 Ribosomal_L7_archeal_euk 555360 556391 + Ribosomal_L7_archeal_euk
NCBI ID Ensembl Genomes exon ID
7446847 Thaps36406.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0224
Normalized Mean Residue
Thaps_bicluster_0276
0.21
(bd1667) Mpp10
0.9521
Brix superfamily
0.9491
Brix
0.944
(RL30) Ribosomal_L24e_L24
0.9421
DUF2373 superfamily
0.9377
hypothetical protein
0.9363
NSA2
0.9359
NIP7
0.9353
PLN02274
0.9334
SrmB
0.9332
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L7_archeal_euk Ribosomal protein L7, which is found in archaea and eukaryotes but not in prokaryotes, binds domain... cl00203 149.599 1.00E-43 173 - 343 specific 100099
Ribosomal_L30_like superfamily Ribosomal protein L30, which is found in eukaryotes and prokaryotes but not in archaea, is one of... - 149.599 1.00E-43 173 - 343 superfamily 260257
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_14450 PHATRDRAFT_14450 204204 253837 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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