3785 AFD_class_I superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
3785 chr_3 AFD_class_I superfamily 1794962 1796871 - AFD_class_I superfamily
NCBI ID Ensembl Genomes exon ID
7449562 Thaps3785.2, Thaps3785.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0264
Normalized Mean Residue
Thaps_bicluster_0001
0.47
HELICc
0.8508
hypothetical protein
0.8478
hypothetical protein
0.8399
hypothetical protein
0.8367
hypothetical protein
0.8362
Gn_AT_II superfamily
0.8335
PDEase_I
0.8294
Glyco_18
0.8264
Motor_domain superfamily
0.8251
hypothetical protein
0.8235
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AFD_class_I superfamily Adenylate forming domain, Class I; This family includes acyl- and aryl-CoA ligases, as well as the... - 163.794 2.47E-45 236 - 577 superfamily 266508
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46146 PHATRDRAFT_46146 232637 175579 Not available Not available AT1G30520.1 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003824 GO:0008152 GO:0016207 -

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

4-coumarate-CoA ligase activity

Details: 
Catalysis of the reaction: ATP + 4-coumarate + CoA = AMP + diphosphate + 4-coumaroyl-CoA.
GO Category: 
MF
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