38827 DEXDc
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
38827 chr_23 DEXDc 83465 85909 - DEXDc
NCBI ID Ensembl Genomes exon ID
7448270 Thaps38827.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0232
Normalized Mean Residue
Thaps_bicluster_0151
0.31
(bd190) SrmB
0.8863
(bd1945) NA
0.8736
HrpA
0.8636
(bd621) NA
0.8616
Sun
0.8498
hypothetical protein
0.8332
(bd1876) NatB_MDM20 superfamily
0.8309
(bd1807) RRS1 superfamily
0.8308
SrmB
0.8308
hypothetical protein
0.8281
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 93.8416 3.91E-22 492 - 618 superfamily 238034
HELICc superfamily Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast... - 93.8416 3.91E-22 492 - 618 superfamily 238034
DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... cl17251 83.1556 2.41E-18 320 - 461 specific 238005
DEXDc superfamily DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA... - 83.1556 2.41E-18 320 - 461 superfamily 266587
CarD_TRCF CarD-like/TRCF domain; CarD is a Myxococcus xanthus protein required for the activation of light-... cl00588 75.1823 5.31E-16 127 - 269 specific 215001
CarD_CdnL_TRCF superfamily CarD-like/TRCF domain; CarD is a Myxococcus xanthus protein required for the activation of light-... - 75.1823 5.31E-16 127 - 269 superfamily 260515
DEXDc DEAD-like helicases superfamily; DEAD-like helicases superfamily. - 98.7182 3.55E-23 290 - 484 multi-dom 214692
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_30585 PHATRDRAFT_30585 156533 247364 Not available Cre01.g021850.t1.1 AT3G02060.1 Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003700 GO:0006355 -

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP
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