3974 (UroD2) URO-D
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
3974 chr_3 (UroD2) URO-D 2263965 2265177 - URO-D

Synonyms

NCBI ID Ensembl Genomes exon ID
7452740 Thaps3974.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0159
 0.26

Most Highly Correlated Transcripts

261608

PLN02585
0.9653

bd1150

(bd1150) PLN02433
0.9519

3326

TauD
0.9391

22194

DUF1995 superfamily
0.9318

7442

hypothetical protein
0.9309

263658

GUN4
0.927

31169

PRX_BCP
0.9237

36235

p450 superfamily
0.9229

3506

DUF1995 superfamily
0.9177

269147

NAD_binding_8 superfamily
0.9152

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
URO-D Uroporphyrinogen decarboxylase (URO-D) is a dimeric cytosolic enzyme that decarboxylates the four... cl00464 414.618 1.70E-143 56 - 397 specific 238368
URO-D_CIMS_like superfamily The URO-D_CIMS_like protein superfamily includes bacterial and eukaryotic uroporphyrinogen... - 414.618 1.70E-143 56 - 397 superfamily 260440

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_20757 PHATRDRAFT_20757 275874 246413 465530 Cre02.g073700.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004853 GO:0006779 -

GO:0004853

uroporphyrinogen decarboxylase activity

Details: 
Catalysis of the reaction: uroporphyrinogen-III = coproporphyrinogen + 4 CO2.
GO Category: 
MF

GO:0006779

porphyrin-containing compound biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.
GO Category: 
BP

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