41650 betA
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
41650 chr_8 betA 1184887 1186777 - betA
NCBI ID Ensembl Genomes exon ID
7452380 Thaps41650.1, Thaps41650.2
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0247
Normalized Mean Residue
Thaps_bicluster_0040
0.39
DUF3395 superfamily
0.8463
POP1 superfamily
0.8273
AAA
0.8255
NBD_sugar-kinase_HSP70_actin superfamily
0.8156
hypothetical protein
0.8147
(bd654) Sec1 superfamily
0.8
TRM13 superfamily
0.7987
FAA1
0.7939
(URE) PLN02303
0.7893
hypothetical protein
0.7877
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_binding_8 superfamily NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain. - 177.859 6.10E-52 25 - 273 superfamily 267487
GMC_oxred_C superfamily GMC oxidoreductase; This domain found associated with pfam00732. - 161.785 5.41E-47 368 - 501 superfamily 253079
GMC_oxred_C superfamily GMC oxidoreductase; This domain found associated with pfam00732. - 161.785 5.41E-47 368 - 501 superfamily 253079
betA choline dehydrogenase; Choline dehydrogenase catalyzes the conversion of exogenously supplied... - 575.675 0 1 - 513 multi-dom 233581
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_1341 PHATRDRAFT_1341 186935 323118 115992 Cre12.g514200.t1.2 AT1G72970.2 284485
KEGG description KEGG Pathway
Not available Not available
GO:0006118 GO:0016491 GO:0016614 GO:0050660 GO:0008812 -

NA

Details: 
NA
GO Category: 
NA

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

oxidoreductase activity, acting on CH-OH group of donors

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO Category: 
MF

flavin adenine dinucleotide binding

Details: 
Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO Category: 
MF

choline dehydrogenase activity

Details: 
Catalysis of the reaction: A + choline = AH(2) + betaine aldehyde.
GO Category: 
MF
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