Phatr_hclust_0140 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
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| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0006412 | protein biosynthesis | 0.000118902 | 0.373948 | Phatr_hclust_0140 |
| GO:0006438 | valyl-tRNA aminoacylation | 0.0103473 | 1 | Phatr_hclust_0140 |
| GO:0006436 | tryptophanyl-tRNA aminoacylation | 0.0103473 | 1 | Phatr_hclust_0140 |
| GO:0019752 | carboxylic acid metabolism | 0.0103473 | 1 | Phatr_hclust_0140 |
| GO:0006221 | pyrimidine nucleotide biosynthesis | 0.0103473 | 1 | Phatr_hclust_0140 |
| GO:0009186 | deoxyribonucleoside diphosphate metabolism | 0.0154826 | 1 | Phatr_hclust_0140 |
| GO:0006432 | phenylalanyl-tRNA aminoacylation | 0.0154826 | 1 | Phatr_hclust_0140 |
| GO:0009098 | leucine biosynthesis | 0.0154826 | 1 | Phatr_hclust_0140 |
| GO:0006418 | tRNA aminoacylation for protein translation | 0.0290733 | 1 | Phatr_hclust_0140 |
| GO:0006564 | L-serine biosynthesis | 0.0407809 | 1 | Phatr_hclust_0140 |
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PHATRDRAFT_17779 : nucleosome assembly protein (NAP) |
PHATRDRAFT_16766 : 3-5-exoribonuclease rna binding (RNase_PH superfamily) |
PHATRDRAFT_45592 : spermidine putrescine abc transporter atp-binding subunit (PGDH_like_3) |
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PHATRDRAFT_31975 : wd-40 repeat family protein (WD40 superfamily) |
PHATRDRAFT_17523 : ribonucleoside-diphosphatebeta subunit family protein (RNRR2) |
PHATRDRAFT_43135 : rh26_orysj dead-box atp-dependent rna helicase 26 (DEXDc superfamily) |
PHATRDRAFT_10821 : dna-directed rna polymerase (PLN00032) |
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PHATRDRAFT_43016 : valyl trna synthetase (PTZ00419) |
PHATRDRAFT_33523 : plastid ribosomal protein l21 large ribosomal subunit (rplU) |
PHATRDRAFT_47514 : elongation protein 4 homolog (PAXNEB superfamily) |
PHATRDRAFT_39304 : uvb-resistance protein uvr8 (RCC1) |
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PHATRDRAFT_40901 : tryptophanyl-trna synthetase (TrpRS_core) |
PHATRDRAFT_48430 : signal recognition particle 68 kda protein |
PHATRDRAFT_27709 : phenylalanine-trna synthetase-beta subunit (PLN02265) |
PHATRDRAFT_16511 : 50s ribosomal protein l20 (Ribosomal_L20) |
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PHATRDRAFT_51303 : (RRM_SF superfamily) |
PHATRDRAFT_11740 : orotate phosphoribosyltransferase (PRTases_typeI) |
PHATRDRAFT_40621 : gtp-binding protein (TypA) |
PHATRDRAFT_44618 : 2-isopropylmalate synthase (PLN02321) |
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PHATRDRAFT_20589 : diptheria toxin resistance protein required for diphthamide biosynthesis-like 1 (diphth2_R) |
PHATRDRAFT_16592 : peroxisomal membrane protein 22 (Mpv17_PMP22) |
PHATRDRAFT_10774 : 50s ribosomal protein l15 (rplO) |
PHATRDRAFT_16281 : mgc83338 protein (RRM_eIF3G_like) |
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PHATRDRAFT_15757 : small nucleolar ribonucleoprotein u3 component (RpsD) |
PHATRDRAFT_16603 : mitochondrial translation initiation factor if- (PRK04004) |
PHATRDRAFT_39526 : eif3s2 protein (WD40 superfamily) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Ammonia_SH | Ammonia_SH | 2.920 | 0.000344828 |
| BlueLight_0.5h | BlueLight_0.5h | -0.135 | 0.797307 |
| BlueLight_24h | BlueLight_24h | 0.244 | 0.0404494 |
| BlueLight_6h | BlueLight_6h | -0.555 | 0.000581395 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | 0.089 | 0.189597 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | 0.039 | 0.737121 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | 0.267 | 0.0768421 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | 0.392 | 0.0154545 |
| Cadmium_0.12mg | Cadmium_0.12mg | -0.035 | 0.380275 |
| Cadmium_1.2mg | Cadmium_1.2mg | -0.222 | 0.00104167 |
| Cadmium_SH | Cadmium_SH | -0.165 | 0.123759 |
| Copper_SH | Copper_SH | 0.167 | 0.0775735 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | -1.030 | 0.00060241 |
| Dark_treated | Dark_treated | -1.511 | 0.000826446 |
| Dispersant_SH | Dispersant_SH | -0.090 | 0.358517 |
| Dispersed_oil_SH | Dispersed_oil_SH | -0.038 | 0.691242 |
| GreenLight_0.5h | GreenLight_0.5h | 0.060 | 0.905642 |
| GreenLight_24h | GreenLight_24h | 0.155 | 0.26075 |
| GreenLight_6h | GreenLight_6h | -0.594 | 0.000609756 |
| Green_vs_Red_24h | Green_vs_Red_24h | 0.179 | 0.111111 |
| Green_vs_Red_6h | Green_vs_Red_6h | 0.353 | 0.029661 |
| highlight_0to6h | highlight_0to6h | 0.466 | 0.000806452 |
| highlight_12to48h | highlight_12to48h | 1.165 | 0.000555556 |
| light_10.5hr | light_10.5hr | -1.756 | 0.000561798 |
| light_15.5hr | light_15.5hr | -0.406 | 0.0598837 |
| light_16hr_dark_30min | light_16hr_dark_30min | -0.231 | 0.296735 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | -0.255 | 0.0291045 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 0.980594 |
| light_6hr | light_6hr | -1.583 | 0.000561798 |
| Mixture_SH | Mixture_SH | 2.550 | 0.000357143 |
| Oil_SH | Oil_SH | 0.108 | 0.230909 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | -0.001 | 0.9976 |
| Re-illuminated_24h | Re-illuminated_24h | 0.434 | 0.000657895 |
| Re-illuminated_6h | Re-illuminated_6h | -0.605 | 0.000505051 |
| RedLight_0.5h | RedLight_0.5h | 0.091 | 0.847658 |
| RedLight_24h | RedLight_24h | -0.024 | 0.886403 |
| RedLight_6h | RedLight_6h | -0.947 | 0.000694444 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | -0.148 | 0.158361 |
| Silver_SH | Silver_SH | 0.049 | 0.574881 |
| Simazine_SH | Simazine_SH | -0.088 | 0.409828 |
| Si_free | Si_free | 0.039 | 0.735072 |
