Phatr_hclust_0148 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plot Conditions Plot Dendrogram
GO ID Go Term p-value q-value Cluster
GO:0006350 transcription 0.0203596 1 Phatr_hclust_0148
GO:0007242 intracellular signaling cascade 0.362831 1 Phatr_hclust_0148
GO:0006525 arginine metabolism 0.0211296 1 Phatr_hclust_0148
GO:0007165 signal transduction 0.396309 1 Phatr_hclust_0148
GO:0006430 lysyl-tRNA aminoacylation 0.0211296 1 Phatr_hclust_0148
GO:0006396 RNA processing 0.452293 1 Phatr_hclust_0148
GO:0009113 purine base biosynthesis 0.0211296 1 Phatr_hclust_0148
GO:0006508 proteolysis and peptidolysis 0.697142 1 Phatr_hclust_0148
GO:0009089 lysine biosynthesis via diaminopimelate 0.0315303 1 Phatr_hclust_0148
GO:0006118 electron transport 0.919291 1 Phatr_hclust_0148
PHATRDRAFT_32550 : cox10cytochrome c oxidase assemblyheme a: farnesyltransferase (PT_UbiA_Cox10)
PHATRDRAFT_46908 : integral membrane protein (PI-PLCc_GDPD_SF superfamily)
PHATRDRAFT_40200 : gtp-binding protein (PRK13796)
PHATRDRAFT_25183 : carbamoyl-phosphate synthetaseaspartateand dihydroorotase (PLN02527)
PHATRDRAFT_50302 : spermatogenesis associated
PHATRDRAFT_4025 : dihydrodipicolinate reductase family protein (PLN02775)
PHATRDRAFT_24772 : alpha-isopropylmalate isomerase (IPMI)
PHATRDRAFT_30514 : ornithine transcarbamylase (PLN02342)
PHATRDRAFT_47067 : phosphoribosylglycinamidephosphoribosylglycinamidephosphoribosylaminoimidazole synthetase (PRK00885)
PHATRDRAFT_33633 : dna gyrase subunit a (PRK05560)
PHATRDRAFT_43222 : carbamoyltransferase (BcrAD_BadFG superfamily)
PHATRDRAFT_43029 : (TFIIS_M)
PHATRDRAFT_48391 : jmj4_schpo jumonji domain-containing protein 4 (meiotically up-regulated gene 149 protein) (Cupin_8)
PHATRDRAFT_49522 : cog3195: uncharacterized protein conserved in bacteria (OHCU_decarbox superfamily)
PHATRDRAFT_48756 : pseudouridine synthase rlu family protein (PseudoU_synth_RluCD_like)
PHATRDRAFT_13538 : solute carrier familymember 36 (Mito_carr)
PHATRDRAFT_18241 : adaptor-related protein complexmu 1 subunit (AP-3_Mu3_Cterm)
PHATRDRAFT_32202 : lysyl-trna synthetase (lysS)
PHATRDRAFT_7664 : shikimate 5-dehydrogenase (NAD_bind_Shikimate_DH)
PHATRDRAFT_47829 : rieske (2fe-2s) region (Rieske superfamily)
PHATRDRAFT_23472 : loc539613 protein
PHATRDRAFT_49134 : (DUF2428 superfamily)
PHATRDRAFT_49783 : sam-dependent methyltransferase-like protein
PHATRDRAFT_18551 : serine carboxypeptidase ii (Peptidase_S10)
PHATRDRAFT_13581 : dna topoisomerase ii (PLN03128)
PHATRDRAFT_2271 : gtp-binding protein (PRK00093)
PHATRDRAFT_22803 : atp-binding protein of abc transporter (ABCD_peroxisomal_ALDP)
PHATRDRAFT_42051 : gene product (PLN02850)
PHATRDRAFT_24238 : carbamate kinase (AAK_CK)
PHATRDRAFT_43285 : (DUF3727 superfamily)
PHATRDRAFT_17555 : mitochondrial carrier protein (Mito_carr)
PHATRDRAFT_22597 : rna polymeraseii and iia subunit (RNA_pol_Rpb8 superfamily)
PHATRDRAFT_23059 : aspartatemitochondrial precursor (Aminotran_1_2)
PHATRDRAFT_3140 : histidinol dehydrogenase (NTP-PPase_His4)
PHATRDRAFT_45306 : (PLDc_SF superfamily)
PHATRDRAFT_49533 : plastidic atp adp transporter (TLC)
Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h -0.295 0.0337696
Copper_SH Copper_SH 0.195 0.0140625
Green_vs_Red_24h Green_vs_Red_24h 0.008 0.958639
Silver_SH Silver_SH 0.100 0.158388
Cadmium_1.2mg Cadmium_1.2mg -0.138 0.00104167
BlueLight_24h BlueLight_24h 0.182 0.0878049
GreenLight_0.5h GreenLight_0.5h -1.320 0.000458716
RedLight_6h RedLight_6h -0.440 0.00240964
light_16hr_dark_7.5hr light_16hr_dark_7.5hr 0.000 1
GreenLight_24h GreenLight_24h 0.037 0.87877
light_6hr light_6hr -1.249 0.000561798
dark_8hr_light_3hr dark_8hr_light_3hr -0.743 0.00060241
Blue_vs_Green_6h Blue_vs_Green_6h -0.058 0.448649
Ammonia_SH Ammonia_SH 2.135 0.000344828
Simazine_SH Simazine_SH 0.057 0.515537
Oil_SH Oil_SH 0.282 0.000666667
Salinity_15ppt_SH Salinity_15ppt_SH -0.067 0.422222
Cadmium_SH Cadmium_SH -0.116 0.1769
Blue_vs_Red_24h Blue_vs_Red_24h 0.153 0.163072
highlight_0to6h highlight_0to6h 0.207 0.0193396
BlueLight_0.5h BlueLight_0.5h -2.265 0.000462963
Dispersant_SH Dispersant_SH 0.004 0.970757
light_16hr_dark_4hr light_16hr_dark_4hr 0.066 0.464053
light_15.5hr light_15.5hr 0.078 0.680633
light_10.5hr light_10.5hr -1.224 0.000561798
Dispersed_oil_SH Dispersed_oil_SH 0.096 0.221951
Si_free Si_free 0.032 0.739286
Re-illuminated_0.5h Re-illuminated_0.5h -2.278 0.000396825
Mixture_SH Mixture_SH 1.904 0.000357143
Blue_vs_Red_6h Blue_vs_Red_6h 0.052 0.79902
light_16hr_dark_30min light_16hr_dark_30min 0.326 0.0351724
BlueLight_6h BlueLight_6h -0.388 0.000581395
highlight_12to48h highlight_12to48h 0.795 0.000555556
RedLight_24h RedLight_24h 0.029 0.842421
Dark_treated Dark_treated -2.543 0.000446429
GreenLight_6h GreenLight_6h -0.330 0.00598592
Cadmium_0.12mg Cadmium_0.12mg 0.003 0.964365
Blue_vs_Green_24h Blue_vs_Green_24h 0.145 0.00487805
RedLight_0.5h RedLight_0.5h -0.089 0.80516
Green_vs_Red_6h Green_vs_Red_6h 0.110 0.474887
Re-illuminated_24h Re-illuminated_24h 0.286 0.00119048
MEME Output