6560 COG3899Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6560	chr_6	COG3899	1890896	1895929	-	COG3899

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446351	Thaps6560.6, Thaps6560.5, Thaps6560.3, Thaps6560.1, Thaps6560.2, Thaps6560.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0425

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0073	0.47	0.000041 8.2

Most Highly Correlated Transcripts

25600 hypothetical protein 0.9183	bd410 (bd410) HNHc 0.9066	5829 hypothetical protein 0.9024	22947 zf-UBR 0.9014	263610 COG3899 0.8983	10298 hypothetical protein 0.8962
25078 hypothetical protein 0.8927	20884 hypothetical protein 0.8875	7174 hypothetical protein 0.8862	22333 hypothetical protein 0.8857

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG3899		Predicted ATPase [General function prediction only]	-	219.192	6.60E-59	534 - 1410	multi-dom	226415

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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