PHATRDRAFT_42758 (TPR)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42758 chr_1 (TPR) 1007388 1011428 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0170

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 47.3748 2.19E-06 434 - 533 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 47.3748 2.19E-06 434 - 533 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 47.3748 2.19E-06 434 - 533 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 47.3748 2.19E-06 434 - 533 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 47.3748 2.19E-06 434 - 533 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 47.3748 2.19E-06 434 - 533 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 47.3748 2.19E-06 434 - 533 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 47.3748 2.19E-06 434 - 533 superfamily 238112
DUF1151 superfamily Protein of unknown function (DUF1151); This family consists of several hypothetical eukaryotic... - 37.0771 0.00589312 1079 - 1148 superfamily 253829
TPR_16 Tetratricopeptide repeat; Tetratricopeptide repeat. - 36.1292 0.0081582 736 - 800 multi-dom 257757

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268346 Not available 206309 201676 72710 Cre03.g189605.t1.2 AT2G06210.1 248762

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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