Module 81 Residual: 0.55

Title Bicluster Model Residual Score
bicluster_0081 v02 0.55 -8.67
Displaying 1 - 17 of 17
Rv0126 Trehalose synthase (EC 5.4.99.16)

Details for Rv0126 - Trehalose synthase (EC 5.4.99.16)

GO Terms: GO:0005886, GO:0005978, GO:0005992, GO:0016161, GO:0047471

PATRIC Pathways: Starch and sucrose metabolism

Essentiality: Griffin Essential: 0.03 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0126

Tuberculist Genomic Region

Rv0127 Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]

Details for Rv0127 - Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]

GO Terms: GO:0005829, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.20 | In vivo Essential: NA

Go to Gene Page: Rv0127

Tuberculist Genomic Region

Rv0498 \AP endonuclease, family protein 2\\\""

Details for Rv0498 - \AP endonuclease, family protein 2\\\""

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.95 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0498

Tuberculist Genomic Region

Rv0526 Thiol:disulfide oxidoreductase related to ResA

Details for Rv0526 - Thiol:disulfide oxidoreductase related to ResA

GO Terms: GO:0005576, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.03 | In vitro Essential: 0.05 | In vivo Essential: NA

Go to Gene Page: Rv0526

Tuberculist Genomic Region

Rv0529 Cytochrome c-type biogenesis protein CcsA/ResC

Details for Rv0529 - Cytochrome c-type biogenesis protein CcsA/ResC

GO Terms: GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.07 | In vivo Essential: NA

Go to Gene Page: Rv0529

Tuberculist Genomic Region

Rv0773c Gamma-glutamyltranspeptidase (EC 2.3.2.2)

Details for Rv0773c - Gamma-glutamyltranspeptidase (EC 2.3.2.2)

GO Terms: GO:0003840, GO:0006751, GO:0034722

PATRIC Pathways: Cyanoamino acid metabolism, Taurine and hypotaurine metabolism, Arachidonic acid metabolism, Glutathione metabolism

Essentiality: Griffin Essential: 0.47 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0773c

Tuberculist Genomic Region

Rv1251c Superfamily I DNA and RNA helicases and helicase subunits

Details for Rv1251c - Superfamily I DNA and RNA helicases and helicase subunits

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.97 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1251c

Tuberculist Genomic Region

Rv1947

Details for Rv1947 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1947

Tuberculist Genomic Region

Rv2047c Phosphoenolpyruvate synthase (EC 2.7.9.2)

Details for Rv2047c - Phosphoenolpyruvate synthase (EC 2.7.9.2)

GO Terms: NA

PATRIC Pathways: Methane metabolism, Pyruvate metabolism, Reductive carboxylate cycle (CO2 fixation)

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2047c

Tuberculist Genomic Region

Rv2048c Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)

Details for Rv2048c - Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)

GO Terms: GO:0005618, GO:0005829, GO:0005886, GO:0008610, GO:0009405, GO:0050111, GO:0071766

PATRIC Pathways: Fatty acid biosynthesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: 0.29

Go to Gene Page: Rv2048c

Tuberculist Genomic Region

Rv2361c Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31)

Details for Rv2361c - Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31)

GO Terms: GO:0008150, GO:0000287, GO:0005829, GO:0005886, GO:0008834, GO:0016094, GO:0030145, GO:0033850, GO:0040007, GO:0050347

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.08 | In vivo Essential: NA

Go to Gene Page: Rv2361c

Tuberculist Genomic Region

Rv2362c DNA recombination and repair protein RecO

Details for Rv2362c - DNA recombination and repair protein RecO

GO Terms: GO:0005618

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.16 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2362c

Tuberculist Genomic Region

Rv2761c Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)

Details for Rv2761c - Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.56 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2761c

Tuberculist Genomic Region

Rv2762c

Details for Rv2762c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.71 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2762c

Tuberculist Genomic Region

Rv2836c putative DNA-damage-inducible protein F

Details for Rv2836c - putative DNA-damage-inducible protein F

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2836c

Tuberculist Genomic Region

Rv3915 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)

Details for Rv3915 - N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)

GO Terms: GO:0008745, GO:0033922, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.14 | In vivo Essential: NA

Go to Gene Page: Rv3915

Tuberculist Genomic Region

Rv2763c Dihydrofolate reductase (EC 1.5.1.3)

Details for Rv2763c - Dihydrofolate reductase (EC 1.5.1.3)

GO Terms: GO:0004146, GO:0004146, GO:0070401

PATRIC Pathways: Folate biosynthesis, One carbon pool by folate

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2763c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.53 e-value: 19000
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 28 of 28
GO:0005886 |

plasma membrane

GO:0005978 |

glycogen biosynthetic process

GO:0005992 |

trehalose biosynthetic process

GO:0016161 |

beta-amylase activity

GO:0047471 |

maltose alpha-D-glucosyltransferase activity

GO:0005829 |

cytosol

GO:0040007 |

growth

GO:0005576 |

extracellular region

GO:0003840 |

gamma-glutamyltransferase activity

GO:0006751 |

glutathione catabolic process

GO:0034722 |

gamma-glutamyl-peptidase activity

GO:0005618 |

cell wall

GO:0008610 |

lipid biosynthetic process

GO:0009405 |

pathogenesis

GO:0050111 |

mycocerosate synthase activity

GO:0071766 |

Actinobacterium-type cell wall biogenesis

GO:0008150 |

biological_process

GO:0000287 |

magnesium ion binding

GO:0008834 |

di-trans,poly-cis-decaprenylcistransferase activity

GO:0016094 |

polyprenol biosynthetic process

GO:0030145 |

manganese ion binding

GO:0033850 |

Z-farnesyl diphosphate synthase activity

GO:0050347 |

trans-octaprenyltranstransferase activity

GO:0008745 |

N-acetylmuramoyl-L-alanine amidase activity

GO:0033922 |

peptidoglycan beta-N-acetylmuramidase activity

GO:0004146 |

dihydrofolate reductase activity

GO:0070401 |

NADP+ binding