Module 127 Residual: 0.45

Title Bicluster Model Residual Score
bicluster_0127 v02 0.45 -27.14
Displaying 1 - 9 of 9
Rv0601c Integral membrane sensor signal transduction histidine kinase

Details for Rv0601c - Integral membrane sensor signal transduction histidine kinase

GO Terms: GO:0004672

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.40 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0601c

Tuberculist Genomic Region

Rv1745c Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)

Details for Rv1745c - Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2)

GO Terms: GO:0008150, GO:0008150, GO:0008150, GO:0008150, GO:0008150, GO:0008150

PATRIC Pathways: Terpenoid backbone biosynthesis

Essentiality: Griffin Essential: 0.34 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1745c

Tuberculist Genomic Region

Rv2891

Details for Rv2891 -

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: 0.80 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2891

Tuberculist Genomic Region

Rv3167c Transcriptional regulator, TetR family

Details for Rv3167c - Transcriptional regulator, TetR family

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.90 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3167c

Tuberculist Genomic Region

Rv3286c RNA polymerase sigma factor SigB

Details for Rv3286c - RNA polymerase sigma factor SigB

GO Terms: GO:0016987, GO:0003700, GO:0006352, GO:0003677, GO:0005515, GO:0006351, GO:0006629, GO:0006979, GO:0006995, GO:0009409, GO:0016987, GO:0034059, GO:0043175, GO:0045893, GO:0046677, GO:0052572, GO:0070417

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.95 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3286c

Tuberculist Genomic Region

Rv3287c Serine-protein kinase RsbW (EC 2.7.11.1)

Details for Rv3287c - Serine-protein kinase RsbW (EC 2.7.11.1)

GO Terms: GO:0000166, GO:0005515, GO:0016989

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.53 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3287c

Tuberculist Genomic Region

Rv1746 Probable serine/threonine-protein kinase pknF (EC 2.7.11.1)

Details for Rv1746 - Probable serine/threonine-protein kinase pknF (EC 2.7.11.1)

GO Terms: GO:0000917, GO:0001558, GO:0004672, GO:0004674, GO:0005515, GO:0005829, GO:0005887, GO:0010827, GO:0043085, GO:0043086, GO:0051055

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1746

Tuberculist Genomic Region

Rv3168 Phosphotransferase

Details for Rv3168 - Phosphotransferase

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.08 | In vitro Essential: NA | In vivo Essential: 0.32

Go to Gene Page: Rv3168

Tuberculist Genomic Region

Rv3169 Putative uncharacterized protein BCG_3193

Details for Rv3169 - Putative uncharacterized protein BCG_3193

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.92 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3169

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.00045 e-value: 0.024
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 31 of 31
GO:0004672 |

protein kinase activity

GO:0008150 |

biological_process

GO:0016987 |

sigma factor activity

GO:0003700 |

sequence-specific DNA binding transcription factor activity

GO:0006352 |

DNA-dependent transcription, initiation

GO:0003677 |

DNA binding

GO:0005515 |

protein binding

GO:0006351 |

transcription, DNA-dependent

GO:0006629 |

lipid metabolic process

GO:0006979 |

response to oxidative stress

GO:0006995 |

cellular response to nitrogen starvation

GO:0009409 |

response to cold

GO:0034059 |

response to anoxia

GO:0043175 |

RNA polymerase core enzyme binding

GO:0045893 |

positive regulation of transcription, DNA-dependent

GO:0046677 |

response to antibiotic

GO:0052572 |

response to host immune response

GO:0070417 |

cellular response to cold

GO:0000166 |

nucleotide binding

GO:0016989 |

sigma factor antagonist activity

GO:0000917 |

barrier septum assembly

GO:0001558 |

regulation of cell growth

GO:0004674 |

protein serine/threonine kinase activity

GO:0005829 |

cytosol

GO:0005887 |

integral to plasma membrane

GO:0010827 |

regulation of glucose transport

GO:0043085 |

positive regulation of catalytic activity

GO:0043086 |

negative regulation of catalytic activity

GO:0051055 |

negative regulation of lipid biosynthetic process

GO:0005886 |

plasma membrane