Module 335 Residual: 0.58

Title Bicluster Model Residual Score
bicluster_0335 v02 0.58 -9.94
Displaying 1 - 19 of 19
Rv0870c FIG020413: transmembrane protein

Details for Rv0870c - FIG020413: transmembrane protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.92 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0870c

Tuberculist Genomic Region

Rv1397c

Details for Rv1397c -

GO Terms: GO:0005886, GO:0040008

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1397c

Tuberculist Genomic Region

Rv1398c \Transcriptional regulator, CopG family\\\""

Details for Rv1398c - \Transcriptional regulator, CopG family\\\""

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1398c

Tuberculist Genomic Region

Rv2358 Transcriptional regulator, ArsR family

Details for Rv2358 - Transcriptional regulator, ArsR family

GO Terms: GO:0010043

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.15 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2358

Tuberculist Genomic Region

Rv2359 Zinc uptake regulation protein ZUR

Details for Rv2359 - Zinc uptake regulation protein ZUR

GO Terms: GO:0003700, GO:0005886, GO:0008270, GO:0010043, GO:0042803, GO:0045893

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.09 | In vitro Essential: NA | In vivo Essential: 0.30

Go to Gene Page: Rv2359

Tuberculist Genomic Region

Rv2493

Details for Rv2493 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2493

Tuberculist Genomic Region

Rv2494 Toxin 1, PIN domain

Details for Rv2494 - Toxin 1, PIN domain

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2494

Tuberculist Genomic Region

Rv2708c

Details for Rv2708c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2708c

Tuberculist Genomic Region

Rv2709 Possible membrane protein

Details for Rv2709 - Possible membrane protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2709

Tuberculist Genomic Region

Rv2867c GCN5-related N-acetyltransferase, FIGfam019367

Details for Rv2867c - GCN5-related N-acetyltransferase, FIGfam019367

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2867c

Tuberculist Genomic Region

Rv1082 Mycothiol S-conjugate amidase Mca

Details for Rv1082 - Mycothiol S-conjugate amidase Mca

GO Terms: GO:0005886, GO:0008270, GO:0010126, GO:0010127, GO:0016810, GO:0016811

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1082

Tuberculist Genomic Region

Rv1083 probable secreted protein

Details for Rv1083 - probable secreted protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.40 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1083

Tuberculist Genomic Region

Rv2374c Heat-inducible transcription repressor HrcA

Details for Rv2374c - Heat-inducible transcription repressor HrcA

GO Terms: GO:0005622, GO:0003700, GO:0005886, GO:0045892

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: 0.33

Go to Gene Page: Rv2374c

Tuberculist Genomic Region

Rv2495c Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)

Details for Rv2495c - Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)

GO Terms: GO:0008415, GO:0005515, GO:0008152, GO:0005886, GO:0004739

PATRIC Pathways: Valine, leucine and isoleucine degradation

Essentiality: Griffin Essential: 0.38 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2495c

Tuberculist Genomic Region

Rv2496c Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)

Details for Rv2496c - Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)

GO Terms: GO:0003863, GO:0005515, GO:0005886, GO:0004739

PATRIC Pathways: Valine, leucine and isoleucine degradation

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2496c

Tuberculist Genomic Region

Rv2497c Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)

Details for Rv2497c - Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)

GO Terms: GO:0003863, GO:0005515, GO:0004739

PATRIC Pathways: Valine, leucine and isoleucine degradation

Essentiality: Griffin Essential: 0.50 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2497c

Tuberculist Genomic Region

Rv2710 RNA polymerase sigma factor SigB

Details for Rv2710 - RNA polymerase sigma factor SigB

GO Terms: GO:0003677, GO:0016987, GO:0006352, GO:0003700, GO:0001666, GO:0005829, GO:0005886, GO:0006351, GO:0009408, GO:0009410, GO:0016987, GO:0040007, GO:0043175, GO:0045893

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.96 | In vitro Essential: 0.20 | In vivo Essential: NA

Go to Gene Page: Rv2710

Tuberculist Genomic Region

Rv2711 Iron-dependent repressor IdeR/DtxR

Details for Rv2711 - Iron-dependent repressor IdeR/DtxR

GO Terms: GO:0003677, GO:0005506, GO:0005886, GO:0006979, GO:0008198, GO:0008270, GO:0016151, GO:0045892, GO:0019290, GO:0030145, GO:0040007, GO:0042803, GO:0006355, GO:0046870, GO:0050897

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.03 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2711

Tuberculist Genomic Region

Rv2753c Dihydrodipicolinate synthase (EC 4.2.1.52)

Details for Rv2753c - Dihydrodipicolinate synthase (EC 4.2.1.52)

GO Terms: GO:0008840, GO:0005886, GO:0040007, GO:0051289

PATRIC Pathways: Lysine biosynthesis

Essentiality: Griffin Essential: 0.01 | In vitro Essential: 0.07 | In vivo Essential: NA

Go to Gene Page: Rv2753c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 57 e-value: 1600
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 40 of 40
GO:0005886 |

plasma membrane

GO:0040008 |

regulation of growth

GO:0010043 |

response to zinc ion

GO:0003700 |

sequence-specific DNA binding transcription factor activity

GO:0008270 |

zinc ion binding

GO:0042803 |

protein homodimerization activity

GO:0045893 |

positive regulation of transcription, DNA-dependent

GO:0010126 |

mycothiol metabolic process

GO:0010127 |

mycothiol-dependent detoxification

GO:0016810 |

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

GO:0016811 |

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

GO:0005622 |

intracellular

GO:0045892 |

negative regulation of transcription, DNA-dependent

GO:0008415 |

NA

GO:0005515 |

protein binding

GO:0008152 |

metabolic process

GO:0004739 |

pyruvate dehydrogenase (acetyl-transferring) activity

GO:0003863 |

3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity

GO:0003677 |

DNA binding

GO:0016987 |

sigma factor activity

GO:0006352 |

DNA-dependent transcription, initiation

GO:0001666 |

response to hypoxia

GO:0005829 |

cytosol

GO:0006351 |

transcription, DNA-dependent

GO:0009408 |

response to heat

GO:0009410 |

response to xenobiotic stimulus

GO:0040007 |

growth

GO:0043175 |

RNA polymerase core enzyme binding

GO:0005506 |

iron ion binding

GO:0006979 |

response to oxidative stress

GO:0008198 |

ferrous iron binding

GO:0016151 |

nickel cation binding

GO:0019290 |

siderophore biosynthetic process

GO:0030145 |

manganese ion binding

GO:0006355 |

regulation of transcription, DNA-dependent

GO:0046870 |

cadmium ion binding

GO:0050897 |

cobalt ion binding

GO:0008840 |

dihydrodipicolinate synthase activity

GO:0051289 |

protein homotetramerization