Module 536 Residual: 0.53

Title Bicluster Model Residual Score
bicluster_0536 v02 0.53 -6.07
Displaying 1 - 18 of 18
Rv0162c Alcohol dehydrogenase (EC 1.1.1.1)

Details for Rv0162c - Alcohol dehydrogenase (EC 1.1.1.1)

GO Terms: NA

PATRIC Pathways: Naphthalene and anthracene degradation, Glycine, serine and threonine metabolism, Tetrachloroethene degradation, Drug metabolism - cytochrome P450, Tyrosine metabolism, Glycolysis / Gluconeogenesis, Retinol metabolism, Metabolism of xenobiotics by cytochrome P450, Fatty acid metabolism

Essentiality: Griffin Essential: 0.88 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0162c

Tuberculist Genomic Region

Rv0209

Details for Rv0209 -

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.85 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0209

Tuberculist Genomic Region

Rv0210

Details for Rv0210 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.80 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0210

Tuberculist Genomic Region

Rv0071 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)

Details for Rv0071 - Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.40 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0071

Tuberculist Genomic Region

Rv0216

Details for Rv0216 -

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.53 | In vitro Essential: NA | In vivo Essential: 0.29

Go to Gene Page: Rv0216

Tuberculist Genomic Region

Rv0358

Details for Rv0358 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0358

Tuberculist Genomic Region

Rv0359 Possible membrane protein

Details for Rv0359 - Possible membrane protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 1.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0359

Tuberculist Genomic Region

Rv0453 PPE family protein

Details for Rv0453 - PPE family protein

GO Terms: GO:0005576, GO:0005829

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.94 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0453

Tuberculist Genomic Region

Rv0540

Details for Rv0540 -

GO Terms: GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.50 | In vitro Essential: 0.12 | In vivo Essential: NA

Go to Gene Page: Rv0540

Tuberculist Genomic Region

Rv0574c Capsule biosynthesis protein CapA

Details for Rv0574c - Capsule biosynthesis protein CapA

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.93 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0574c

Tuberculist Genomic Region

Rv0610c

Details for Rv0610c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.94 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0610c

Tuberculist Genomic Region

Rv0727c L-fuculose phosphate aldolase (EC 4.1.2.17)

Details for Rv0727c - L-fuculose phosphate aldolase (EC 4.1.2.17)

GO Terms: NA

PATRIC Pathways: Fructose and mannose metabolism

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0727c

Tuberculist Genomic Region

Rv1064c PUTATIVE LIPOPROTEIN LPQV

Details for Rv1064c - PUTATIVE LIPOPROTEIN LPQV

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1064c

Tuberculist Genomic Region

Rv1530 Alcohol dehydrogenase (EC 1.1.1.1)

Details for Rv1530 - Alcohol dehydrogenase (EC 1.1.1.1)

GO Terms: NA

PATRIC Pathways: Glycine, serine and threonine metabolism, Metabolism of xenobiotics by cytochrome P450, Naphthalene and anthracene degradation, Retinol metabolism, Drug metabolism - cytochrome P450, Fatty acid metabolism, Tyrosine metabolism, Glycolysis / Gluconeogenesis, Tetrachloroethene degradation

Essentiality: Griffin Essential: 0.55 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1530

Tuberculist Genomic Region

Rv1803c PE family protein

Details for Rv1803c - PE family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.43 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1803c

Tuberculist Genomic Region

Rv2414c DNA internalization-related competence protein ComEC/Rec2

Details for Rv2414c - DNA internalization-related competence protein ComEC/Rec2

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.50 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2414c

Tuberculist Genomic Region

Rv2570

Details for Rv2570 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.63 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2570

Tuberculist Genomic Region

Rv3398c Dimethylallyltransferase (EC 2.5.1.1); Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10); Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)

Details for Rv3398c - Dimethylallyltransferase (EC 2.5.1.1); Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10); Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)

GO Terms: GO:0008150, GO:0000287, GO:0004161, GO:0005506, GO:0030145, GO:0040007

PATRIC Pathways: Terpenoid backbone biosynthesis, Terpenoid backbone biosynthesis, Terpenoid backbone biosynthesis

Essentiality: Griffin Essential: 0.29 | In vitro Essential: 0.08 | In vivo Essential: NA

Go to Gene Page: Rv3398c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.6 e-value: 130
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 10 of 10
GO:0005886 |

plasma membrane

GO:0005576 |

extracellular region

GO:0005829 |

cytosol

GO:0040007 |

growth

GO:0008150 |

biological_process

GO:0000287 |

magnesium ion binding

GO:0004161 |

dimethylallyltranstransferase activity

GO:0005506 |

iron ion binding

GO:0030145 |

manganese ion binding