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[+] Show/hide bicluster #25 rows and columns.
bicluster 25
Mycobacterium tuberculosis H37Rv
13x221
[+] Show/hide bicluster #25 rows (genes).
bicluster 25 genes
Mycobacterium tuberculosis H37Rv
13
[+] Show/hide bicluster #25 rows (short gene names).
bicluster 25 short names
Mycobacterium tuberculosis H37Rv
13
short_name
[+] Show/hide bicluster #25 rows (long gene names).
bicluster 25 long names
Mycobacterium tuberculosis H37Rv
13
long_name
[+] Show/hide bicluster #25 rows (NCBI RefSeq gene IDs).
bicluster 25 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
24
[+] Show/hide bicluster #25 gene upstream sequences.
bicluster 25 upstream sequences
Mycobacterium tuberculosis H37Rv
12
upstream
[+] Show/hide bicluster #25 columns (arrays; conditions).
bicluster 25 arrays
Mycobacterium tuberculosis H37Rv
221
[+] Show/hide bicluster #25 ratios.
bicluster 25 ratios
Mycobacterium tuberculosis H37Rv
13x221
GENES 2867:::H37Ra..7H9.shake.replicate.3 2867:::H37Ra..7H9.shake.replicate.4 2867:::H37Ra..Sauton.s.media.replicate.3 2867:::H37Ra..Youman.media.replicate.3 2867:::H37Rv..7H9.shake.replicate.1 2867:::H37Rv..Dubos.media.replicate.4 2885:::H37Rv..7H9.roll.replicate.3 2885:::Strain.1006...replicate.1 2885:::Strain.1006...replicate.3 2885:::Strain.3160..replicate.1 2885:::Strain.3160..replicate.2 2885:::Strain.3160..replicate.4 2885:::Strain.9800608..replicate.2 2885:::Strain.9802501..replicate.3 2885:::Strain.9802826..replicate.3 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.2 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.3 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN...2hr.hypoxia.rep.3 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.1 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1 4084:::High.iron.wt.vs.low.iron.wt.3a 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.3 4101:::H37Rv.Day.0.rep.2 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5 4101:::H37Rv.Day14.1 4101:::H37Rv.Day14.3 4101:::H37Rv.Day24.1 4101:::H37Rv.Day24.2 4101:::H37Rv.Day24.3 4101:::H37Rv.Day60.1 4101:::H37Rv.Day60.2 4101:::H37Rv.Day60.3 4101:::H37Rv.Day8.1 4101:::NRP.Day10..2 4101:::NRP.Day10..3 4107:::DIPED..100ug.mL..DMSO..12h..1 4107:::DIPED..50ug.mL..DMSO..12h 4107:::DIPED.50ug.mL.vs.DMSO.12h.1 4107:::DIPED.50ug.mL.vs.DMSO.12h.2 4107:::pH4.8vspH6.8..11h. 4107:::pH4.8vspH6.8..5h. 4107:::pH5.2vspH6.8..11h. 4107:::pH5.2vspH6.8..16h. 4107:::UV.60J.vs.ctrl.6h.1 4107:::WT.t.0h.WT.t.6h..2 4107:::X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054. 4107:::X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053. 4107:::X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046. 4107:::X.241..1ug.mL..DMSO..12h..1 4107:::X0.12mg.mL.BZA.pH5.6..4h..1 4107:::X0.12mg.mL.BZAvspH5.6..7h. 4107:::X0.12mg.mL.Nam.pH5.6..4h..1 4107:::X0.12mg.mL.Nam.pH5.6..4h..2 4107:::X0.12mg.mL.NamvspH5.6..4h. 4107:::X0.12mg.mL.NamvspH5.6..5.5h. 4107:::X0.12mg.mL.PZA.pH5.6..2.5h. 4107:::X0.1ug.mL.RifpvsEtOH..6h 4107:::X0.2ug.mL..111891.DMSO..5.5h..3 4107:::X0.2ug.mL.Mtmvsctrl..0.33h. 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.2ug.mL.PA824.DMSO..6h..2 4107:::X0.32ug.mL.CervsEtOH..6hA 4107:::X0.4ug.mL.PA824.DMSO..6h..3 4107:::X0.4ug.mL.PA824.DMSO..6h..4 4107:::X0.5ug.mL..124196vsDMSO..6h 4107:::X0.5ug.mL..124196vsDMSO..6hA 4107:::X0.5ug.mL.CeruleninvsDMSO..6hB 4107:::X0.5ug.mL.CeruleninvsDMSO..6hC 4107:::X0.5ug.mLRifapentinevsEtOH.6h 4107:::X1.ug.mL..111891vsDMSO..6h 4107:::X100ug.mL.TriclosanvsEtOH..6h 4107:::X100uM.DipyridylvsCtrl..6hA 4107:::X10ug.mL.EMBvsDMSO..6h 4107:::X10ug.mL.menadionevsDMSO..6h 4107:::X10ug.mL.TriclosanvsDMSO..6hC 4107:::X12.5ug.mL.AntimycinvsDMSO..6h 4107:::X150uM.Deferroxaminevsctrl..6hB 4107:::X1ug.mL..111891vsDMSO..6h 4107:::X1ug.mL..124196vsDMSO..6hA 4107:::X20ug.mL.Prcp.6776.DMSO..6h..1 4107:::X2ug.mL..121940vsDMSO..6hA 4107:::X5ug.mL.KCN.DMSO..6h..2 4107:::X60J.UVvsctrl..6h. 4364:::H37dosR.mutant.hypoxia.4hr.rep.5 4364:::H37dosR.mutant.hypoxia.8hr.rep.2 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.2 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.3 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.4 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.3 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.4 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.4 4575:::Extracted.Lung.Surfactant.30min.rep.2 4575:::Extracted.Lung.Surfactant.30min.rep.4 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep1 4575:::Whole.Lung.Surfactant.30min.rep.3 4583:::X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4 4583:::X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection..DS..rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.1 4615:::AA_30uM_1h_03 4615:::AA_30uM_1h_07 4615:::AA_30uM_24.AA_30uM_1h_01 4615:::AA_30uM_2h_01 4615:::AA_30uM_2h_02 4615:::AA_30uM_2h_06 4615:::AA_30uM_2h_08 4615:::Acetate.3mM.10m_04 4615:::Acetate.3mM.60m.03 4615:::C2_ceramide_25uM_1h_01 4615:::CK_LA_2h.3 4615:::CK_OA_NA_0.05_2h 4615:::CK.2.2h.for.OA.NA.and.PA.NA 4615:::CK.for.AA.NA.4h 4615:::CK.for.MDG.24h.PA.NA 4615:::CK.for.MDG.4h.PA.NA 4615:::CK.MDG.2h.for.PA.NA 4615:::ETYA_10uM_1h_02 4615:::L2A_30uM_1h_05 4615:::L2A_30uM_2h_03 4615:::MDA_1254.pMV261_04 4615:::MTB1254_Pellicle_14D_02 4615:::MTB1254.0485.1._OA_10m_04 4615:::MTB1254.0485.14._01 4615:::MTB1254.3524.1._OA_10min_01 4615:::MTB1254.3524.1._OA_10min_02 4615:::MTB1254.3524.1._PA_12h_04 4615:::MTB1254.B4.1._PA_10MIN_01 4615:::MTB1254.B4.1._PA_10MIN_02 4615:::MTB1254.B4.1.Compl._OA_30MIN_04 4615:::MTB1254TA1_OA.30min_02 4615:::MTB1254TA1_OA.30min_04 4615:::MTB6548_PA50_1h_01 4615:::MTB6548_PA50_1h_02 4615:::OA_50uM_2h_01 4615:::OA_50uM_2h_07 4615:::OA_50uM_2h_10 4615:::OA_50uM_4h_01 4615:::OA_50uM.0.5.BSA_1h_01 4615:::PA_300uM_4h_T0_01 4615:::PA_50uM_10.min_03 4615:::PA_50uM_10min_10 4615:::PA_50uM_10min_T0_01 4615:::PA_50uM_1h_10 4615:::PA_50uM.0.5.BSA_1h_01 4615:::PA_50uM.AA_30uM_2h_02 4615:::PA_50uM.OA_30uM_2h_02 4615:::PA_50uM.OA_30uM_4h_02 4615:::Starvation_1254_12h_02 4615:::Starvation_1254_6h_01 4615:::Starvation_1254_OA50_12h_01 4615:::Starvation_1254_OA50_12h_03 4615:::Starvation_1254_OA50_24h_01 4615:::Starvation_1254_PA50.OA30_24h_03 4615:::Starvation_1254_PA50.OA30_6h_04 4615:::TBD097 4615:::TBD098 4615:::TBD1275 4615:::TBD425 4615:::TBE055 4615:::Tet_20uM_30M_01 4615:::X7H9_PA_50uM_4h_T0_02 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.3 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.4hr.rep.1 4696:::H37Rv.wt.vs.dosT.null.nitric.oxide.treatment.1hr.rep.1 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2 4703:::CDC1551.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.1 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.3 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.2 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.1 4795:::CDC1551.ctrl.vs.ctrl.at.0.hr.rep.1 4802:::H37Rv.ctrl.vs.relE2.overexpression.6.hr.rep.3 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.3 4815:::H37Rv.reaeration.for.6hrs.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2 Raghavan_Nature2008:::Complemented.espR.mutant..R...rep3 Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages...IFNg.for.24hrs
RV0725C NA NA NA NA NA NA -0.904804677346652 0.83900070081235 0.378372865072236 0.806098712545199 0.0493529824007265 -0.0493529824007265 0.246764912003632 -0.575784794675142 0.312568888537934 0.458653716444085 0.701470389855659 -0.56657223796034 -0.107918521516255 -1.75367597463915 -0.917307432888169 -0.161877782274383 -0.404694455685957 -0.0674490759476595 NA -0.58191359641118 1.13737657480367 -0.37030865226166 -0.74061730452332 -0.66126545046725 -0.34385803424297 -0.697749061527512 NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.944287063267233 0.640766221502765 0.101173613921489 0.0674490759476596 0.910562525293404 -0.741939835424255 0.573317145555106 1.48387967084851 0.944287063267233 -1.68622689869149 NA 1.61877782274383 0.944287063267233 0.775664373398084 -0.708215297450425 -0.101173613921489 -1.28153244300553 -2.05719681640362 -1.65250236071766 -0.0337245379738297 -1.31525698097936 0.337245379738298 NA 0.0674490759476596 -1.78740051261298 -1.75367597463915 0.539592607581276 -4.4179144745717 -2.42816673411574 0.607041683528936 0.134898151895319 1.18035882908404 0.438418993659787 1.48387967084851 0.303520841764468 -1.75367597463915 1.78740051261298 0.640766221502765 -0.573317145555106 0.438418993659787 0.741939835424255 0.505868069607446 1.71995143666532 1.07918521516255 -0.269796303790638 0.573317145555106 -0.607041683528936 0.236071765816808 -0.246097979809028 -0.0455736999646348 -0.3 -1.95 0.5 -0.674490759476595 -0.674490759476595 NA NA NA -0.168622689869149 0.202347227842979 -1.1691173164261 0.741939835424255 0.0449660506317728 -0.436435197308385 -2.65828711087835 -3.41212972441101 -0.833194467588735 0.198379635140175 0.31740741622428 NA NA 0.146628425973173 0.762467815060499 0.645165074281961 1.02639898181221 0.293256851946346 0.909096241033672 NA 0.821119185449768 0.293256851946346 -2.19942638959759 -0.146628425973173 -0.351908222335615 -0.175954111167807 NA -0.997073296617575 -3.19649968621517 1.05572466700684 0.410559592724884 1.37830720414783 NA 0.0879770555839037 -0.205279796362442 NA 0.0879770555839037 0.439885277919519 0.997073296617576 -2.25807775998686 -0.381233907530249 -0.791793500255134 0.967747611422941 1.67156405609417 1.96482090804052 -2.58066029712784 -3.78301339010786 0.938421926228306 2.69796303790638 NA 2.22875207479223 1.67156405609417 0.0293256851946346 0.557188018698057 NA -2.25807775998686 NA 0.850444870644403 0.909096241033672 0.381233907530249 0.791793500255134 -3.84166476049713 -3.54840790855078 -3.1378483158259 -2.11144933401369 -2.08212364881905 -1.05572466700684 -1.34898151895319 0.117302740778538 -1.17302740778538 NA 0.205279796362442 0.146628425973173 -2.52200892673857 0.821119185449768 -1.24708003730565 -0.0879770555839037 -0.821119185449768 -0.0879770555839037 -0.16129126857049 0.869343645547612 -0.419683139229882 0.809388911371914 -0.0599547341756974 0.989253113899006 0.809388911371914 -0.629524708844822 -0.44966050631773 -0.539592607581276 -1.13913994933825 0.659502075932671 -1.67873255691953 0.433601202520668 -2.74614094929757 0.746757626563373 -1.15626987338845 -1.56578212021352 -1.13218091769286 0.734255763480851 -1.67342011211915 0.674490759476595 -0.425 0.375 -0.725 0.175 1.725 -1.37830720414783 0.674490759476595 1.48094710232905 -1.08505035220148 0.466011797456557 -0.662227291122475 0.265249175075065 NA NA -0.182912748332636 0.112415126579433
RV1511 1.5063626961644 -0.112415126579433 -0.292279329106525 0.38221143037007 0.741939835424254 -1.28153244300553 -0.0963558227823708 1.34898151895319 -1.05991405060608 -0.963558227823707 -0.578134936694224 -1.20444778477963 -1.34898151895319 0 -0.433601202520668 0.995676835417831 1.57381177211206 -0.674490759476595 -0.513897721505977 -3.59728405054184 0.0963558227823707 -0.256948860752989 0.89932101263546 -0.0249811392398739 -0.55546297839249 0.515787051364455 0.55546297839249 0.87287039461677 1.22995373786909 -0.674490759476595 0.63481483244856 0.481779113911854 0.410559592724884 -0.674490759476595 0.175954111167807 -0.997073296617575 -0.410559592724884 -0.967747611422941 -0.586513703892691 -1.75954111167807 -2.4633575563493 -2.4633575563493 -2.31672913037613 -0.146628425973173 1.67156405609417 1.37830720414782 0.607041683528936 1.2478079050317 0.0337245379738297 1.2478079050317 0.607041683528936 -1.98974774045596 0.539592607581276 0.101173613921489 -0.0674490759476595 -0.843113449345744 0.303520841764468 0.640766221502765 -0.101173613921489 0.539592607581276 0.0337245379738297 -1.48387967084851 -0.505868069607446 -0.978011601241063 -2.42816673411574 -1.75367597463915 -0.741939835424255 2.90031026574936 -0.438418993659787 0.337245379738298 -0.978011601241063 -0.741939835424255 0.978011601241063 -2.93403480372319 -2.93403480372319 -0.101173613921489 0.101173613921489 1.51760420882234 2.09092135437744 0 -0.134898151895319 -1.65250236071766 -0.134898151895319 0.404694455685957 -0.505868069607446 0.101173613921489 0.404694455685957 0.505868069607446 0.573317145555106 -0.303520841764468 -1.88857412653447 1.14663429111021 0.101173613921489 0.607041683528936 -1.03157410272891 -0.991898175700875 0.833194467588735 -0.07935185405607 1.4680093000373 -1.45 -0.372132832814673 NA NA NA -0.505868069607446 0.00853785771489352 -0.674490759476595 0.674490759476595 -0.82817219834468 -0.421556724672872 -0.843113449345744 -2.47313278474752 -1.60191555375691 0.505868069607446 0.75880210441117 -1.79161607985971 1.4965263725887 0.492897093463666 1.76405275555417 0.441013188888543 1.32303956666563 0.95985223463977 2.04941423071735 2.38665961045564 0.778258568626841 0.466955141176104 -0.830142473201963 -1.71216885097905 -0.259419522875614 0.38912928431342 NA -0.441013188888543 -1.53057518496612 -1.37492347124075 0.415071236600982 0.18159366601293 0.907968330064647 -0.155651713725368 -1.03767809150245 -1.45274932810344 -0.0778258568626841 -0.648548807189034 1.71216885097905 -1.34898151895319 -0.129709761437807 0.0778258568626841 0.103767809150245 0.804200520914402 2.02347227842979 -2.07535618300491 -2.72390499019394 1.6084010418288 2.69796303790638 3.50216355882078 0.466955141176104 1.1414459006527 -2.56825327646857 1.34898151895319 -2.15318203986759 NA 1.6084010418288 0.441013188888543 0.492897093463666 0.363187332025859 0.778258568626841 -1.78999470784173 -1.34898151895319 -1.1414459006527 0.492897093463666 -1.16738785294026 -1.19332980522782 -0.415071236600982 0.207535618300491 0.155651713725368 0.18159366601293 0.0259419522875614 -0.544780998038788 1.32303956666563 0.95985223463977 -2.90828811344209 -0.974264430355082 -0.278361265815738 1.27403810123357 -0.160593037970618 1.96215493665919 -0.817564556941328 0.817564556941328 -0.245269367082398 1.59425088603559 1.06283392402373 -0.817564556941328 -0.408782278470664 -0.163512911388266 -0.245269367082398 1.14459037971786 -1.55337265818852 1.03582509491049 -2.69796303790638 0.337245379738298 -0.9876471835193 -0.602223892389817 -0.794935537954559 0.107062025313745 -0.556722531631475 0 NA NA NA NA NA NA 1.16162297465414 0.89932101263546 -0.786905886056028 1.26467017401862 0 1.05991405060608 1.9315479775 0.7082506525 0.85 0
RV1512 1.29429307899563 -0.528654919589764 -0.674490759476595 0.601572839533179 0.565113879561472 -0.638031799504887 0.719456810108368 -0.134898151895319 0.404694455685957 -0.944287063267233 -1.12415126579433 -0.269796303790638 -0.674490759476595 0.089932101263546 0.089932101263546 0.374717088598108 1.0492078480747 0.562075632897163 -0.487132215177541 -2.81037816448581 0 0.262301962018676 0.337245379738298 -0.1 -0.815009667700886 0.505868069607446 -0.0562075632897163 1.40518908224291 1.29277395566347 0.168622689869149 1.26467017401862 2.10522873412392 -0.106498540969989 -1.053152238481 -0.982153211167674 -0.0118331712188876 -0.153831225845539 -0.769156129227696 -0.863821498978797 NA -2.47313278474752 -2.35480107255864 -2.37846741499641 0.0354995136566629 1.12415126579433 1.73947616917648 2.12724008758003 0.951204917210583 1.50463323267856 1.05497272636083 -0.155651713725368 -1.02038345664408 0.0518839045751227 0.985794186927331 1.85052592984604 1.53922250239531 -0.501544410892853 -0.0864731742918712 0.674490759476595 0.190240983442117 NA -0.259419522875614 -0.916615647493835 -0.639901489759847 -1.15874053551107 0.12106244400862 0.536133680609601 0.0172946348583742 -1.53922250239531 0.709080029193344 -1.64299031154555 -3.02656110021549 0.536133680609601 -3.47622160653322 -2.85361475163175 0.916615647493835 0.363187332025859 0.57072295032635 1.50463323267856 0.501544410892853 0.0518839045751227 -3.47622160653322 0.432365871459356 -0.397776601742607 -0.501544410892853 -0.12106244400862 0.674490759476595 0.709080029193344 0.224830253158865 0.605312220043098 -0.0172946348583742 2.33477570588052 -2.7498469424815 0.0172946348583742 -0.34186517946074 0.877761947264062 NA NA NA -0.55 NA 0.55 -0.15 0.8 0.0465166041018342 0 -0.89932101263546 0.642372151882472 -0.995676835417831 0.15 -2.7 -4.45 -0.15 -0.25 0.05 -0.779411544284066 0.539592607581276 0.749434177196217 -0.149886835439243 NA 1.1491324050342 1.32400037971332 1.77366088603105 1.77366088603105 0.349735949358235 0.399698227837982 -0.324754810118361 0.949283291115208 -0.174867974679117 0.774415316436091 NA -0.0499622784797478 -0.699471898716469 -0.549585063277226 -0.0499622784797478 0.624528480996847 1.02422670883483 -0.649509620236721 -0.374717088598109 -0.649509620236721 -0.974264430355082 0.599547341756974 -0.174867974679117 -0.249811392398739 -0.199849113918991 -0.774415316436091 0.224830253158865 0.199849113918991 0.224830253158865 -1.69871746831143 -1.99849113918991 1.79864202527092 2.14837797462916 1.7236986075513 1.69871746831143 0.499622784797478 -0.999245569594956 1.6237740505918 NA -0.674490759476595 -0.199849113918991 0.924302151875334 0.699471898716469 1.92354772147029 1.1491324050342 -1.7236986075513 -1.29901924047344 -2.2982648100684 -0.224830253158865 -1.97350999995004 -2.39818936702789 -4.5965296201368 0.549585063277226 -0.274792531638613 0 0.249811392398739 0.174867974679117 -1.49886835439243 0.974264430355082 -2.80675187008003 -2.04047624715609 -0.0226719583017343 0.600806894995959 -1.29230162319885 1.22137515905221 -0.528654919589764 1.29429307899563 -1.11199827913709 1.47658787885417 0.893244519306842 -0.0182294799858539 -0.41927803967464 -1.33075203896734 0.492195959618056 1.00262139922197 -1.33075203896734 0.941741815118265 -2.62160559343733 0.636312037242071 -0.483597148303974 -0.738121963200802 -0.71266948171112 -0.757322958008809 0.283996109253303 -0.0293256851946344 NA NA NA NA NA 0.590179414542021 0.481779113911854 -0.108400300630167 -0.240889556955927 NA NA 0.499845830683548 1.26188732466738 0.0457634688276117 0.34 -0.249999999999999
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RV1513C NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.58358700051027 1.08505035220148 0.70381644467123 0.791793500255134 0.0586513703892692 -0.821119185449768 0.645165074281961 1.14370172259075 0.381233907530249 -1.55426131531563 NA 1.93549522284588 0.938421926228306 2.02347227842979 0.0586513703892692 -0.263931166751711 -0.557188018698057 -1.96482090804052 -0.791793500255134 0.351908222335615 -1.05572466700684 0.821119185449768 -0.410559592724884 0.821119185449768 -1.05572466700684 -1.11437603739611 0.938421926228306 -2.63931166751711 -2.19942638959759 0.0293256851946346 0.498536648308788 -0.117302740778538 1.64223837089954 0.351908222335615 0.850444870644403 -2.08212364881905 1.14370172259075 0.175954111167807 -0.557188018698057 0.234605481557077 0.615839389087326 0.410559592724884 0.879770555839037 1.37830720414783 -1.73021542648344 0.498536648308788 -0.850444870644403 0.615839389087326 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.674490759476595 -0.863348172130042 -1.91555375691353 -1.67273708350196 0.782409280992851 0.863348172130042 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.351908222335615 -1.32943106215677 0.488761419910576 -0.175954111167807 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.38752384806614 0 NA NA NA NA NA
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RV3102C NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.37830720414783 1.08505035220148 -0.733142129865864 0.263931166751711 -4.85828851391113 -0.478986191512365 -0.674490759476595 0.850444870644403 NA -0.299773670878487 0.974264430355082 -0.187358544299054 -0.112415126579433 1.23656639237376 -0.562075632897163 0.711962468336406 NA -0.21583704303251 -0.0359728405054184 -0.737443230361077 -0.377714825306893 -2.85984082018076 -1.72669634426008 -0.521606187328567 -3.21956922523495 -2.64400377714825 -2.94977292144431 -2.62601735689554 -0.44966050631773 1.52884572148028 1.3669679392059 0.429221392394197 0.919760126558994 0.521197405050096 -0.0306586708852997 -0.153293354426499 -0.551856075935396 -0.337245379738298 0.398562721508897 0.429221392394197 -1.93149626577389 1.83952025311799 1.47161620249439 -0.153293354426499 -0.459880063279497 -0.766466772132495 -0.490538734164796 0 0.183952025311799 0.613173417705996 -0.275928037967698 0.766466772132495 1.44095753160909 -0.705149430361895 0.306586708852998 -2.78993905056228 -2.78993905056228 0.245269367082398 -5.08933936695976 -4.26155525305667 0.889101455673694 0.551856075935396 0.827784113903094 1.44095753160909 0.643832088591295 -0.705149430361895 0 0.521197405050096 0.337245379738298 0.0919760126558993 -0.214610696197099 1.04239481010019 0.674490759476595 -0.245269367082398 -0.0306586708852997 -3.74035784800657 0.398562721508897 -2.69796303790638 -0.122634683541199 -1.12415126579433 -1.71433068033635 0 -0.0963558227823707 0.0642372151882471 0.15 NA -1.06988189434219 0.581457551272927 0.325616228712839 -0.674490759476595 0 -0.722668670867781 0.529957025303039 0 0.0493529824007265 -3.24084584431437 -4.82014128113762 -5.67559297608354 -0.213862923736481 0.0164509941335755 -0.0306586708852998 0.720478765804545 1.40086542352831 1.24521370980294 0.0778258568626841 1.27115566209051 1.71216885097905 2.7498469424815 1.76405275555417 0.518839045751227 0.259419522875614 -2.17912399215515 -1.6084010418288 -1.16738785294026 0.181593666012929 0.129709761437807 -0.700432711764157 -0.18159366601293 -1.16738785294026 0.830142473201963 2.04941423071735 1.37492347124075 -2.02347227842979 -0.337245379738298 -1.27115566209051 -0.233477570588052 0.492897093463666 0.311303427450736 -0.207535618300491 -0.18159366601293 -0.441013188888543 1.06362004379002 1.24521370980294 2.85361475163175 -0.363187332025859 -0.103767809150245 2.02347227842979 1.86782056470442 2.85361475163175 0.933910282352209 1.08956199607758 -0.337245379738298 -0.207535618300491 -1.45274932810344 -0.233477570588052 0.830142473201963 -0.207535618300491 0.129709761437807 1.21927175751538 0.207535618300491 -4.59172555489836 -2.64607913333126 -4.33230603202275 -2.67202108561882 -2.33477570588052 -3.03520841764468 -2.2828918013054 0.363187332025859 0.0518839045751227 -0.441013188888543 0 -0.18159366601293 -0.18159366601293 0.518839045751227 -1.40188275499057 -0.926573164533504 0 0.0136260759490221 -1.44436405059635 0.319495622909966 -0.479243434364949 0.24849659559664 -0.283996109253303 0.905237598244904 0.425994163879955 -1.34898151895319 -1.06498540969989 -0.37274489339496 -1.33123176212486 0.798739057274915 -0.550242461678275 0.583887523128993 -2.61742682781962 0.946300468519402 -1.61072420173515 -1.44965178156164 -1.00670262608447 0.347164361495306 -1.18035882908404 NA -0.0963558227823707 -1.05991405060608 0.674490759476595 0.0481779113911854 0.240889556955927 -0.66806703795777 0.642372151882471 1.49030339236733 -0.68091448099542 0.0546884399575618 -0.619802319519033 0.931439620229584 1.06724863151092 0.483952174756045 NA -0.674490759476595
RV3105C 0.31740741622428 -0.595138905420525 -0.71416668650463 0.991898175700875 -0.277731489196245 -1.26962966489712 -1.47004396296181 -0.12106244400862 1.43545469324506 -0.466955141176104 0.466955141176104 -0.328598062309111 -0.639901489759847 -0.432365871459356 0.12106244400862 1.97995674556033 0.805037358084968 NA 0.369882029390391 -3.67706252746918 -0.19581989791256 -0.19581989791256 1.37073928538792 -1.075 -0.989253113899006 1.30401546832142 0.764422860740141 0.089932101263546 0.539592607581276 -0.764422860740141 1.07918521516255 -0.375 -0.911987505771171 0.0569992191106981 -0.151997917628529 -1.10198490280683 -2.71696277760995 -1.48197969687815 -1.67197709391381 -3.34395418782763 -3.47695236575259 -3.1919562701991 -3.1349570510884 -0.854988286660473 0.987986464585435 0.968986724881869 0.57072295032635 0.103767809150245 0 0.207535618300491 -0.155651713725368 -1.81593666012929 0.363187332025859 NA 0.804200520914402 0.363187332025859 1.29709761437807 1.32303956666563 -0.0518839045751227 1.27115566209051 -0.752316616339279 -1.01173613921489 -1.11550394836514 -0.804200520914402 -1.99753032614222 -0.596664902613911 -0.648548807189034 1.55651713725368 NA 0.285361475163175 -0.95985223463977 -1.97158837385466 1.21927175751538 NA -3.52810551110834 0.363187332025859 0.207535618300491 -0.18159366601293 0.0518839045751227 0.726374664051718 -0.155651713725368 -0.415071236600982 -0.155651713725368 -0.778258568626841 -1.45274932810344 0.57072295032635 -0.233477570588052 -0.155651713725368 0 0.18159366601293 -0.830142473201963 0.752316616339279 NA -0.103767809150245 0 -0.524603924037352 -1.1 0.0499999999999999 0.35 -0.674490759476595 -0.224830253158865 -0.5 0.9 0 -1.3128480854098 0.112415126579432 -2.48919208854458 0.144533734173556 -1.20444778477963 0.0749434177196217 -2.66049132904657 -6.37019050616784 -1.42392493667281 0.412188797457919 0.112415126579433 -0.387832186699042 1.46701740186159 0.762467815060499 0.733142129865864 -0.234605481557077 -0.117302740778538 0.175954111167807 -0.0293256851946345 1.23167877817465 0.381233907530249 0.879770555839037 -0.70381644467123 -1.75954111167807 -2.22875207479223 NA NA -0.850444870644403 -0.997073296617575 -0.615839389087326 0.645165074281961 1.43695857453709 0.586513703892692 -2.19942638959759 -0.0586513703892691 -0.938421926228306 -0.938421926228306 0.733142129865864 0.70381644467123 0.146628425973173 -0.733142129865864 0.0293256851946346 -0.205279796362442 1.524935630121 0.791793500255134 0.234605481557077 -0.821119185449768 0.850444870644403 2.60998598232248 2.25807775998686 NA 0.351908222335615 -0.586513703892691 0.557188018698057 -0.586513703892691 -0.909096241033672 1.37830720414783 -0.146628425973173 0.615839389087326 0.909096241033672 0.557188018698057 -5.21997196464495 -4.51615551997372 -2.99121988985273 -2.40470618596004 -1.29033014856392 -0.498536648308788 -1.37830720414783 0.557188018698057 -0.351908222335615 -1.34898151895319 0.0586513703892692 -0.879770555839037 -0.498536648308788 0.205279796362442 -1.82165614567301 -1.63696633760612 -0.0303141914371504 1.28835313607889 -0.560812541587281 1.0406428860496 -0.385423291129483 0.23125397467769 -0.732304253146018 1.1177275442755 -0.115626987338845 -0.539592607581276 -0.46250794935538 -1.38752384806614 -0.809388911371914 0.23125397467769 -1.27189686072729 1.1091625822504 -4.556559797353 0.329751037966335 -0.749434177196217 -0.0299773670878486 -0.68947944302052 0.620096343389773 -1.09876720495381 0.786905886056028 0.430924651887825 -0.730698322766312 0.580811487327068 0.24356610758877 0.730698322766312 -0.837018653326377 0.511962865626813 1.06455770471607 -0.138148709772315 NA NA 0.586714564750189 1.91013858142607 0.762054567852375 0.431559765597313 -0.5
[+] Show/hide bicluster #25 motif PSSM #1. bicluster 25 motif PSSM #1 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0.857143 0 0.142857 0
2 0 0.285714 0 0.714286
3 0.142857 0.142857 0.571429 0.142857
4 0.428571 0.142857 0.142857 0.285714
5 0 0.142857 0.857143 0
6 0.454882 0.045118 0.47369 0.02631
7 0.312024 0.187976 0.187976 0.312024
8 0.02631 0.47369 0.47369 0.02631
9 0.169167 0.47369 0.330833 0.02631
10 0 0.857143 0 0.142857
11 0.285714 0.571429 0.142857 0
12 0.714286 0 0.142857 0.142857
13 1 0 0 0
14 0 1 0 0
15 0.142857 0 0 0.857143
16 0 1 0 0
17 0.142857 0.285714 0.571429 0
18 0.857143 0 0.142857 0
19 0 0.857143 0.142857 0
20 0 1 0 0
21 0 0.142857 0.857143 0 [+] Show/hide bicluster #25 motif PSSM #2. bicluster 25 motif PSSM #2 Mycobacterium tuberculosis H37Rv 23x4
POSITION A C G T
1 0 0 0.25 0.75
2 0 0.25 0 0.75
3 0 0 1 0
4 0.75 0 0 0.25
5 0 0 0.25 0.75
6 0 0.25 0.75 0
7 0 0.5 0.5 0
8 0 0.75 0.25 0
9 0 0 0 1
10 0 0 1 0
11 0.25 0.75 0 0
12 0.25 0 0.75 0
13 0 1 0 0
14 0.5 0 0 0.5
15 0 0 0 1
16 0 0 1 0
17 1 0 0 0
18 0 0.5 0 0.5
19 0 0.25 0.75 0
20 0 0.5 0.5 0
21 0.25 0 0 0.75
22 0.5 0.5 0 0
23 1 0 0 0 |