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[+] Show/hide bicluster #27 rows and columns.
bicluster 27
Mycobacterium tuberculosis H37Rv
13x238
[+] Show/hide bicluster #27 rows (genes).
bicluster 27 genes
Mycobacterium tuberculosis H37Rv
13
[+] Show/hide bicluster #27 rows (short gene names).
bicluster 27 short names
Mycobacterium tuberculosis H37Rv
13
short_name
[+] Show/hide bicluster #27 rows (long gene names).
bicluster 27 long names
Mycobacterium tuberculosis H37Rv
13
long_name
[+] Show/hide bicluster #27 rows (NCBI RefSeq gene IDs).
bicluster 27 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #27 gene upstream sequences.
bicluster 27 upstream sequences
Mycobacterium tuberculosis H37Rv
13
upstream
[+] Show/hide bicluster #27 columns (arrays; conditions).
bicluster 27 arrays
Mycobacterium tuberculosis H37Rv
238
[+] Show/hide bicluster #27 ratios.
bicluster 27 ratios
Mycobacterium tuberculosis H37Rv
13x238
GENES 2867:::H37Ra..7H9.shake.replicate.1 2885:::H37Rv..7H9.roll.replicate.1 2885:::Strain.1006...replicate.4 2885:::Strain.9800608..replicate.1 2885:::Strain.CDC1551..replicate.2 2885:::Strain.CDC1551..replicate.4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.2 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.6 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.6 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.05.mM.DETA.NO.rep.3 4062:::MTB1254.Day.0.rep.2 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.2 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.6 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.2 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.3 4084:::High.iron.wt.vs.high.iron.ideR.Complement.1b 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.vs..MTB1254.rep2 4089:::MTB1254.vs..MTB1254.rep6 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1 4101:::NRP.Day14..8 4101:::NRP.Day20..1 4107:::DIPED..100ug.mL..DMSO..12h..1 4107:::DIPED.5ug.mL.vs.DMSO.12h.1 4107:::pH5.2vspH6.8..10.5h. 4107:::pH5.2vspH6.8..2h. 4107:::pH5.6vspH6.8..2h. 4107:::UV.60J.vs.ctrl.6h.1 4107:::X0.05mM.Palmitate.10mM.Gluc..2 4107:::X0.12mg.mL.PZAvspH5.6..11h. 4107:::X0.1mg.mL.TriclosanvsEtOH..6hA 4107:::X0.1mM.GSNOvsDMSO..6h 4107:::X0.1ug.mL.Mtmvsctrl..0.75h. 4107:::X0.2mg.mL.AmpvsEtOH..6hB 4107:::X0.2mg.mL.TLMvsEtOH..6hA 4107:::X0.2ug.mL.Mtm.ctrl..4h...1 4107:::X0.2ug.mL.Mtmvsctrl..0.33h. 4107:::X0.2ug.mL.Mtmvsctrl..0.75h. 4107:::X0.2ug.mL.Mtmvsctrl..2h. 4107:::X0.2ug.mL.RifvsDMSO..6hA 4107:::X0.4ug.mL.INHvsEtOH..6hA 4107:::X0.5mM.DNP.DMSO..6h 4107:::X0.5ug.mL.CeruleninvsDMSO..6hB 4107:::X0.5ug.mL.CervsEtOH..6h 4107:::X100ug.mLCephalexinvsEtOH.6h 4107:::X10ug.mLchlorpromazinevsctrl.6hA 4107:::X200uM.Dipyridylvsctrl..6h 4107:::X200uM.Dipyridylvsctrl..6hA 4107:::X20ug.mL.Cephalexin.Ctrl..6h..2 4107:::X20ug.mL.Prcp.6778.DMSO..6h..2 4107:::X2ug.mL..111891vsDMSO..6h 4107:::X2ug.mL..111895vsDMSO..6hB 4107:::X40ug.mL.EtavsEtOH..6hA 4107:::X4mM.H2O2vsctrl..1h. 4107:::X50ug.mL.VerapamilvsDMSO..6h 4107:::X50ug.mLAntimycinAvsDMSO..6hB 4363:::H37Rv.hypoxia.1.day.rep.3 4363:::H37Rv.hypoxia.4hr.rep.7 4363:::H37Rv.hypoxia.8hr.rep.1 4396:::Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.4 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.5 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.6 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.6 4575:::Extracted.Lung.Surfactant.2hrs.rep.2 4575:::Extracted.Lung.Surfactant.30min.rep.3 4575:::Purified.Human.SP.A.Coated.2hrs.rep2 4575:::Whole.Lung.Surfactant.2hrs.rep.2 4575:::Whole.Lung.Surfactant.2hrs.rep.3 4575:::Whole.Lung.Surfactant.30min.rep.4 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs..DS..rep.3 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2hrs..DS..rep.1 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.3 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages.rep.2 4615:::AA_30uM_2h_01 4615:::AA_60uM_24h_02 4615:::Acetate.3mM.2h.04 4615:::Acetate.3mM.2h.05 4615:::Acetate.3mM.60m.04 4615:::C2_ceramide_25uM_1h_01 4615:::CHP_25uM_24h_01 4615:::CHP.AA.30m.1 4615:::CK.4h.for.AA.NA.0.03mM 4615:::CK.AA0.03.2h.02 4615:::CK.for.AA.NA.24h 4615:::CK.for.OA.4h.1 4615:::CK.MDG.2h.for.PA.NA 4615:::CK.MDG.AA.Na.2h 4615:::CK.PA.NA.2h.02..100901 4615:::CK.PA.NA.2h.3..101801 4615:::L2A_30uM_10min_03 4615:::L2A_30uM_10min_06 4615:::L2A_30uM_1h_03 4615:::L2A_30uM_1h_07 4615:::L2A_30uM_30min_04 4615:::L2A_30uM_4h_05 4615:::MDA_1254.pMV261_03 4615:::MDG_1254.pMV261_01 4615:::MTB1254_Bottom_10D_01 4615:::MTB1254_Bottom_10D_02 4615:::MTB1254_Bottom_14D_03 4615:::MTB1254_Pellicle_10D_03 4615:::MTB1254_Pellicle_14D_02 4615:::MTB1254_Pellicle_14D_03 4615:::MTB1254_Pellicle_14D_04 4615:::MTB1254.0485.1._Act_2h_01 4615:::MTB1254.0485.1._OA_10m_03 4615:::MTB1254.0485.1._OA_10m_04 4615:::MTB1254.0485.1._OA_30m_02 4615:::MTB1254.0494.4._OA_30MIN_01 4615:::MTB1254.3524.1._OA_10min_01 4615:::MTB1254.3524.1._OA_10min_03 4615:::MTB1254.3524.1._PA_12h_01 4615:::MTB1254.3524.2._INH_20MIN 4615:::MTB1254.B4.1._OA_10MIN_01 4615:::MTB1254.B4.1._OA_10MIN_02 4615:::MTB1254.B4.1._OA_30MIN_01 4615:::MTB1254.B4.1._PA_10MIN_01 4615:::MTB1254.B4.1.Compl._OA_30MIN_01 4615:::MTB1254.Rv0465c.4._PA50.OA30_30m_01 4615:::MTB1254.Rv3524.2._PA50.OA30_2h_01 4615:::MTB1254.Rv3524.2._PA50.OA30_2h_02 4615:::MTB1254.Rv3524.2.compl._PA50.OA30_2h_02 4615:::MTB1254TA1_OA.30min_02 4615:::MTB1254vsMTB1254B4 4615:::OA_50uM_10min_01 4615:::OA_50uM_10min_07 4615:::OA_50uM_1h_03 4615:::OA_50uM_1h_09 4615:::OA_50uM_24h_05 4615:::OA_50uM_2h..0.5.BSA.10mMGlu._30min_01 4615:::OA_50uM_2h..1.0..BSA.10mMGlu._30.min._01 4615:::OA_50uM_2h..1.5.BSA.10mMGlu._30.min_01 4615:::OA_50uM_30min_06 4615:::OA_50uM_4h_02 4615:::OA_50uM_4h_06 4615:::PA_100uM_2h_T0_01 4615:::PA_5.uM_10min_02 4615:::PA_50uM_10min_01 4615:::PA_50uM_10min_06 4615:::PA_50uM_10min_T0_01 4615:::PA_50uM_1h_04 4615:::PA_50uM_1h_05 4615:::PA_50uM_1h_08 4615:::PA_50uM_24h_01 4615:::PA_50uM_2h_T0_01 4615:::PA_50uM_2h_T0_02 4615:::PA_50uM_30min_03 4615:::PA_50uM_3d_01 4615:::PA_50uM_3d_04 4615:::PA_50uM.AA_30uM_2h_03 4615:::PA_50uM.AA_30uM_30min_02 4615:::PA_50uM.AA_30uM_30min_04 4615:::PA_50uM.OA_10uM_4h_02 4615:::PA_50uM.OA_10uM_4h_03 4615:::PA_50uM.OA_30uM_24h_01 4615:::PA_50uM.OA_30uM_2h_03 4615:::PA_50uM.OA_30uM_2h_04 4615:::PA_50uM.OA_30uM_4h_03 4615:::Rv.MT90_100603_01 4615:::Rv.MT96_100503_01 4615:::Spe_100uM_30M_01 4615:::Starvation_1254_OA50_24h_02 4615:::TBD041 4615:::TBD042 4615:::TBD092 4615:::TBE056 4615:::TBE734 4615:::Test_261B4.1 4615:::Test_361.1 4615:::WM_1254_14d_01 4615:::WM_1254_20d_01 4615:::WM_T0_01 4615:::X2.BA_100uM_30min_01 4615:::X7H9_PA_50uM_4h_T0_02 4615:::X7H9_PA100um_4h_T0_01 4615:::X7h9.control.4h 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.1 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.1 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.3 4699:::CDC1551.Ctrl.vs.H37Rv.rep.1 4699:::CDC1551.Ctrl.vs.H37Rv.rep.2 4699:::CDC1551.Ctrl.vs.H37Rv.rep.3 4703:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::H37Rv.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.3 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4799:::H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.24.hr.rep.1 4815:::H37Rv.reaeration.for.24hrs.rep.2 4860:::M..bovis.nadABC.null.nicotinamide.starvation.rep.3 Raghavan_Nature2008:::Complemented.espR.mutant..R...rep3 Raghavan_Nature2008:::espR.mutant.complemented.with.N.terminal.Flag.espR..RFL..rep2 Rohde_CellHostMicrobe2007:::CDC1551.ctrl..vs.2.hr.after.macrophage.infection Rohde_CellHostMicrobe2007:::CDC1551.ctrl..vs.24.hr.after.macrophage.infection Schnappinger_JEM2003:::MTB.in.NOS2.null.macrophages...IFNg.for.24hrs Schnappinger_JEM2003:::MTB.in.NOS2.null.macrophages.for.24hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.24hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.4hrs
RV1366 NA -0.674490759476595 NA 0.123886057863048 0.234006998185757 0.784611699799305 0.149886835439243 0.149886835439243 0.224830253158865 -3.93452943028014 -1.19909468351395 1.23656639237376 -0.487132215177541 0.89932101263546 NA 0.524603924037352 -0.824377594915839 -0.112415126579433 -1.16162297465414 0 NA NA NA NA 0.529957025303039 0.521197405050096 -0.643832088591295 1.74754424046209 -0.183952025311799 0.183952025311799 0.705149430361895 -0.674490759476595 -1.19568816452669 0.122634683541199 1.04239481010019 0.682617154169084 -0.617605996629172 -0.666364364784106 NA 0.745489786789921 -0.319495622909966 0.212997081939977 -0.390494650223292 -0.461493677536618 0.24849659559664 -1.27798249163986 0.603491732163269 0.674490759476595 0.283996109253303 0.319495622909966 -0.425994163879955 1.81047519648981 -0.319495622909966 0.106498540969989 2.30746838768309 -1.13598443701321 -1.41998054626652 0.638991245819932 0.177497568283315 -3.30145477006965 -0.638991245819932 -0.212997081939977 NA 1.27798249163986 0 -0.283996109253303 1.10048492335655 1.10048492335655 -0.816488814103247 -0.638991245819932 0.24849659559664 0.745489786789921 NA NA NA NA NA 0.175 0.0750000000000001 0.0750000000000001 -2.575 1.12415126579433 0.192711645564741 0.23125397467769 1.56096432907441 -2.65942070879343 0.385423291129483 -1.25262569617082 0.477764287962588 -1.52752319057935 NA NA NA NA NA 0.890327802509106 0.161877782274383 0.647511129097531 -0.323755564548766 -1.48387967084851 -0.242816673411574 -1.34898151895319 -1.07918521516255 1.05220558478349 0.296775934169702 -1.16012410629974 0.134898151895319 NA 2.72494266828544 -0.701470389855659 0.377714825306893 -0.0539592607581277 NA -1.61877782274383 -1.07918521516255 -1.5648185619857 -0.755429650613787 0.404694455685957 0.593551868339404 0.134898151895319 0.485633346823149 -0.35073519492783 -0.404694455685957 -0.107918521516255 -0.188857412653447 -0.242816673411574 -1.16012410629974 -1.268042627816 -1.34898151895319 -2.13139079994604 -0.78240928099285 -0.242816673411574 0.512612977202212 1.88857412653447 0.539592607581276 -1.16012410629974 -1.05220558478349 -0.863348172130042 -0.35073519492783 0.21583704303251 -0.377714825306893 -0.890327802509106 -0.593551868339404 -1.10616484554162 1.02522595440442 -0.404694455685957 0.674490759476595 -0.56657223796034 -0.161877782274383 0.809388911371914 0.0269796303790638 0.485633346823149 0.809388911371914 0.377714825306893 2.85984082018076 -0.56657223796034 -1.18710373667881 -4.47861864292459 -0.728450020234723 0.0269796303790638 0.728450020234723 -1.48387967084851 0.728450020234723 NA 1.24106299743694 0.0539592607581276 2.26628895184136 2.29326858222042 0.107918521516255 -0.161877782274383 0.161877782274383 -0.620531498718468 -0.539592607581276 0.0539592607581276 0.78240928099285 0.323755564548766 0.296775934169702 -2.18535006070417 -0.971266693646297 1.45690004046945 0.0269796303790638 0 0.539592607581276 0.971266693646297 1.83461486577634 0.56657223796034 0.242816673411574 0.836368541750978 -0.890327802509106 -2.05045190880885 -0.809388911371914 -0.404694455685957 3.83110751382706 0.674490759476595 NA -0.539592607581276 0.242816673411574 0.593551868339404 0.343161965347741 -0.792822471665472 -1.66677043447582 0.356701843953969 -0.0164509941335755 -1.26672654828531 -0.0493529824007265 0.641588771209444 1.56284444268967 -2.4182961376356 0.378372865072236 0.856084425489525 -0.103767809150246 0.129709761437807 0.466955141176104 -1.66028494640393 -0.578134936694225 -1.31933357348169 -0.741198636787467 -1.24521370980295 0.429895209336731 0.68190274584447 -0.667078773108721 -0.933910282352209 NA 1.75 0.1 -1.02195569617666 -0.838003670864861 0.129709761437807 NA NA -0.635 -0.695 0.312910451043771 -0.312910451043771 0.75 1.25 -0.25 -0.75
RV2006 NA -1.1414459006527 1.16738785294026 0.415071236600982 -2.07535618300491 -2.30883375359296 0.599547341756974 0.89932101263546 -0.399698227837982 -4.19683139229881 -0.757211324318064 1.01173613921489 0.0827205648414692 -0.369060981600401 -0.579043953890285 -0.0381787222345243 0.80811628729743 1.11990918554604 1.15172478740815 -0.820842528042272 NA NA NA NA 0.25 NA NA 0.0719456810108368 0.395701245559603 -0.269796303790638 -0.359728405054184 0.845361751877333 -1.85260128602905 0.377714825306893 -0.44966050631773 -0.0542001503150835 0.752779865487271 -0.487801352835752 0.799396455675965 0.249811392398739 0.799396455675965 NA NA 1.0492078480747 -0.0999245569594956 -0.499622784797478 0.249811392398739 1.7236986075513 0.199849113918991 -0.974264430355082 -0.974264430355082 NA 0.224830253158865 -0.649509620236721 1.47388721515256 1.34898151895319 -0.599547341756974 1.22407582275382 0.174867974679117 -1.69871746831142 -0.399698227837982 -0.674490759476595 NA -0.399698227837982 -1.79864202527092 0.174867974679117 0.124905696199369 0.0999245569594955 -0.549585063277226 NA 0.124905696199369 0.624528480996847 NA NA NA 0.5 0 NA NA NA NA NA -0.421556724672872 0.650401803781003 2.22822840184232 -2.33662870247249 0.674490759476595 -0.49382359175965 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.277999569784272 -0.897801889303306 0.674490759476595 NA 0.09790994895628 -1.66446913225676 -1.16404050425799 0.4895497447814 0.554823044085586 -0.620096343389773 0.728885175563418 0.390494650223292 1.15373419384154 1.61522787137816 1.95247325111646 -0.674490759476595 -0.535310126568727 -2.84784987334562 -2.05559088602391 -1.00638303794921 0.663784556945221 0.68519696200797 -0.620959746819723 -0.728021772133468 NA 2.22654476515392 1.52304365043102 -0.111256207748717 -0.737072376335248 0.385423291129483 NA NA -0.674490759476595 -0.957181739551345 -0.869967583178579 0.6432229759247 0.337245379738298 0.337245379738298 -1.34898151895319 -1.01173613921489
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RV3830C 0 -1.3371483477343 0.414160992661067 0.69815710191437 -0.29582928047219 0.69815710191437 -2.7 0.65 1.25 -2.1 -0.578134936694224 2.00420111387331 1.81148946830857 -1.27189686072729 0.192711645564741 -0.655219594920121 -0.616677265807173 -0.308338632903586 0.0770846582258966 -0.385423291129483 NA NA NA NA 0.45 -2.15837043032511 0.35073519492783 1.5648185619857 -0.485633346823149 0.404694455685957 -0.215837043032511 -0.377714825306893 -1.13314447592068 1.16012410629974 0.917307432888169 0.0493529824007265 -0.707392747743746 NA 1.57381177211206 0.0749434177196217 0.949283291115208 0.724453037956343 0.799396455675965 2.09841569614941 -0.424679367077856 0.249811392398739 -0.624528480996847 1.52384949363231 -0.674490759476595 -0.0499622784797477 -1.77366088603105 0.999245569594956 -1.09917012655445 -0.299773670878487 1.39894379743294 0.949283291115208 -2.02347227842979 1.34898151895319 NA -0.749434177196217 0.5745662025171 0.799396455675965 -0.524603924037352 0.649509620236721 -0.199849113918991 0.149886835439243 -0.299773670878487 -0.224830253158865 -2.17335911386903 -1.17411354427407 0.499622784797478 -0.499622784797478 -1.73221490501944 -0.689820094919245 -0.321916044295648 NA NA NA NA NA NA NA -0.200912141120688 -0.574034688916251 2.32484049011082 -0.459227751133001 1.95171794231525 -1.86561273897782 0.122634683541199 NA NA NA NA NA NA -0.316167543504654 -0.189700526102792 -0.590179414542021 0.210778362336436 -0.969580466747606 -0.779879940644813 -1.3068258464859 -1.13820315661675 0.737724268177526 -0.463712397140159 -2.08670578713072 0.316167543504654 NA 0.885269121813031 0.0632335087009308 -3.11951976257925 -0.8220356131121 NA -1.53868204505598 NA NA NA 0.189700526102792 -0.611257250775664 2.63472952920545 0.674490759476595 0.252934034803723 -0.252934034803723 -1.85484958856064 -0.674490759476595 -1.13820315661675 -1.60191555375691 -1.01173613921489 -1.39113719142048 -3.45676514231755 -2.65580736543909 4.00478888439228 1.55975988128963 3.03520841764468 0.674490759476595 -1.55975988128963 NA -1.26467017401862 -1.55975988128963 NA 0.105389181168218 -0.864191285579388 -0.779879940644813 -0.800957776878457 0.906346958046675 -0.948502630513962 0.274011871037367 -1.22251450155133 0.0210778362336436 1.45437070012141 -0.105389181168218 0.337245379738298 1.28574801025226 0.189700526102792 NA -0.0421556724672872 -1.43329286388776 -3.30922028868205 -0.569101578308377 -0.484790233373803 1.09604748414947 NA NA NA 1.18035882908404 -0.653412923242952 0.927424794280318 NA -0.948502630513962 -0.484790233373803 NA 0.400478888439228 -0.569101578308377 -0.8220356131121 0.0843113449345744 -1.1592809928504 -0.168622689869149 -2.50826251180359 -1.39113719142048 0.147544853635505 1.85484958856064 0.189700526102792 0.23185619857008 -0.548023742074734 NA 0.8220356131121 0.569101578308377 0.590179414542021 -1.47544853635505 -0.52694590584109 NA 1.43329286388776 3.98371104815864 0.0421556724672872 NA 1.68622689869149 0.442634560906516 2.71904087414002 0.556530492124186 -0.604924447961072 NA 0 1.12903887999343 -1.51027278752368 -0.835782028047085 0.777130657657816 0.425222435322201 -0.425222435322201 0.307919694543663 0.835782028047085 1.30499299116124 1.15836456518807 1.12903887999343 -1.9501580654432 -0.542882806407991 -2.15508023149839 -0.921255671480227 -1.03641263041526 0.378372865072236 0.888353683213077 -0.378372865072236 -0.526431812274416 1.7 1.825 -0.025 -0.674490759476595 -0.89932101263546 1.48025824395199 -0.663249246818652 1.17875289870434 0.450283304802935 0.046709886390346 -0.16425 0.82525 0.337245379738298 1.01173613921489 -1.01173613921489 -1.34898151895319
RV3832C NA -0.918455502266002 0.459227751133001 2.00912141120688 0.373122547795563 1.43508672229063 -0.915380316432522 0.289067468347112 0.674490759476595 -3.42063170877416 -1.07496964791582 1.81269391609335 4.38418993659787 -1.51760420882234 -0.75880210441117 -0.379401052205585 -0.442634560906516 -0.632335087009308 1.18035882908404 -0.611257250775665 NA NA NA NA 0.993986382386561 -1.07305348098549 -2.33005898728278 0.613173417705996 -0.245269367082398 0.398562721508897 0 0 2.14610696197099 -0.643832088591295 -0.214610696197099 -1.68622689869149 -0.149886835439244 0.112415126579432 -0.674490759476595 0.337245379738298 0.210778362336436 1.39113719142048 0.168622689869149 1.22251450155133 0.969580466747606 -0.337245379738298 -0.0421556724672872 1.60191555375691 -0.0843113449345744 -1.05389181168218 -1.68622689869149 2.10778362336436 -0.337245379738298 -0.927424794280318 0.505868069607446 1.09604748414947 -2.19209496829893 0.168622689869149 NA 0 -0.674490759476595 -0.505868069607446 0.0843113449345744 1.05389181168218 -0.463712397140159 -0.505868069607446 1.01173613921489 0.674490759476595 -1.77053824362606 -0.800957776878457 0.29508970727101 0.632335087009308 -0.430215727666153 -0.422923935671811 -0.0802097119377573 -0.192711645564741 -1.13699870883198 0.651232457425678 0.55819924922201 0.55819924922201 -2.79099624611005 NA -0.99536500427614 0.261938159020037 2.44912178683735 0.969171188374137 1.29659388714918 -0.929880464521131 -0.277731489196245 -0.125486652925878 NA NA NA NA NA -0.134898151895319 -0.79011774681544 -0.886473569597811 -0.501050278468328 -0.443236784798905 -0.925015898710759 -2.60160721512401 -1.1948122025014 -0.0963558227823707 -0.173440481008267 -0.751575417702492 0.0963558227823707 -0.346880962016535 0.154169316451793 -0.674490759476595 -0.423965620242431 NA NA -0.693761924033069 NA -0.404694455685957 0.404694455685957 1.38752384806614 -0.886473569597811 1.1177275442755 0.134898151895319 -0.655219594920121 -0.366152126573009 -1.83076063286504 -1.17554103794492 -0.925015898710759 -0.963558227823707 -1.21408336705787 -1.52242199996146 -2.52452255689811 -1.00210055693666 1.52242199996146 1.85003179742152 3.77714825306893 0.192711645564741 -2.04274344298626 0.0770846582258966 -0.578134936694224 -1.6380489873003 0.211982810121216 NA -0.655219594920121 -1.23335453161435 -0.847931240484863 1.31043918984024 -1.05991405060608 0.134898151895319 -1.05991405060608 0.674490759476595 0.404694455685957 -0.443236784798905 0.578134936694224 0.828660075928388 0.443236784798905 NA -0.115626987338845 -1.90784529109094 -0.23125397467769 -0.269796303790638 -0.423965620242431 0.578134936694224 0.289067468347112 NA NA 1.48387967084851 2.46670906322869 1.58023549363088 3.64225010117361 -0.211982810121216 -1.09845637971903 -1.07918521516255 -0.46250794935538 -0.867202405041337 -0.925015898710759 0.616677265807173 -0.635948430363647 -0.616677265807173 -1.7922183037521 -0.925015898710759 0.308338632903586 0.732304253146018 0 0.192711645564741 2.19691275943805 0.963558227823707 0.655219594920121 -0.115626987338845 0.501050278468328 -1.23335453161435 -0.32760979746006 NA 1.0406428860496 3.77714825306893 0.423965620242431 NA 0.539592607581276 -0.0385423291129483 1.65732015185678 0.447293872073953 -0.447293872073953 NA -0.545724341758336 0.407020285891049 0.0116291510254585 0.151178963330961 0.918702931011224 0.127920661280044 -1.05825274331673 0.779153118705722 2.05719681640361 2.4169252214578 1.80988353792886 1.06794370250461 -1.85484958856064 -0.509615240493428 -1.64875518983168 0.0599547341756974 -1.58880045565598 0.239818936702789 1.40893625312889 -0.599547341756974 0.0299773670878487 0.674490759476595 0.55 -0.0499999999999999 -0.401482594926545 -1.44533734173556 0.907496658204873 -3.47441170288525 NA 0.57846950552333 0.203752416925221 -0.61125 0.44925 0 0 -0.44966050631773 -1.34898151895319
RV3833 1.74062131477831 -1.09604748414947 0.252934034803723 1.09604748414947 -0.730698322766312 -2.13588740500922 -1.18035882908404 -0.533971851252305 -0.0843113449345745 -0.112415126579432 -1.42392493667281 0.974264430355082 1.08667955693451 -0.674490759476595 -1.7236986075513 -0.374717088598108 0.262301962018676 -0.187358544299054 -1.79864202527092 0.711962468336406 NA NA NA NA NA -1.58505328477 -1.38270605692702 -0.236071765816808 1.48387967084851 1.01173613921489 0.0674490759476595 0.775664373398084 -1.04546067718872 0.438418993659787 -0.134898151895319 0.175954111167808 -0.938421926228306 -0.791793500255134 0.974264430355082 0.524603924037352 NA 2.14837797462916 0.249811392398739 0.199849113918991 0.924302151875334 -1.19909468351395 0.124905696199369 NA 0.224830253158865 -0.699471898716469 -0.774415316436091 -0.474641645557604 -0.549585063277226 -0.524603924037352 NA 1.74867974679117 0.0749434177196218 -0.199849113918991 0.699471898716469 -0.774415316436091 -0.724453037956343 -0.824377594915839 0.499622784797478 0.324754810118361 -0.999245569594956 -0.349735949358235 0.324754810118361 0.524603924037352 0.824377594915839 -1.22407582275382 0.0749434177196218 0.374717088598109 NA NA NA -0.583343359547326 NA NA NA NA NA NA 0.246242658221614 -0.738727974664842 1.95923506324154 -2.58019481006126 1.16697607591982 -1.42392493667281 -0.0722668670867781 NA NA NA NA NA NA 0.189700526102792 0.927424794280318 -0.548023742074734 -1.32790368271955 -0.864191285579388 -0.990658302981249 -0.548023742074734 -1.01173613921489 1.87592742479428 0.906346958046675 NA NA NA NA NA -1.34898151895319 0.23185619857008 NA 0.0421556724672872 0 NA -0.252934034803723 -0.674490759476595 -0.800957776878457 0.463712397140159 1.43329286388776 -0.0421556724672872 -0.0632335087009308 0.0843113449345744 -0.0210778362336436 -0.548023742074734 -0.590179414542021 -0.358323215971941 -0.400478888439228 -0.885269121813031 -0.337245379738298 0.23185619857008 1.4965263725887 1.83377175232699 0.590179414542021 0.484790233373803 -0.147544853635505 0.337245379738298 0.189700526102792 -0.168622689869149 -0.611257250775664 0.0210778362336436 -0.0632335087009308 -0.400478888439228 0.695568595710239 -0.421556724672872 0.864191285579388 -0.885269121813031 0.0210778362336436 2.128861459598 -0.674490759476595 -0.29508970727101 0.23185619857008 0.0210778362336436 2.00239444219614 0.274011871037367 -0.969580466747606 -1.55975988128963 -0.0421556724672872 -0.316167543504654 2.8033522190746 -1.58083771752327 0.358323215971941 -4.86898016997167 1.6440712262242 1.37005935518683 NA NA 0.337245379738298 -1.43329286388776 -0.737724268177526 -0.379401052205585 0.463712397140159 0.590179414542021 0.358323215971941 0.147544853635505 0.400478888439228 -1.37005935518683 -1.20143666531769 0.864191285579388 -0.0421556724672872 -0.252934034803723 -0.463712397140159 0.695568595710239 1.03281397544854 1.11712532038311 0.864191285579388 -0.168622689869149 -1.66514906245784 -0.737724268177526 -1.43329286388776 1.72838257115878 3.03520841764468 -0.632335087009308 0.52694590584109 0.484790233373803 0.505868069607446 2.63472952920545 0.0532492704849944 -0.674490759476595 0.733142129865864 -0.275661440829565 0.928806947475967 -1.54801157912661 -0.796120240693686 0.398060120346843 1.17206590991015 0.265373413564562 0.530746827129124 0.484046309742027 1.61084263733822 1.73780560382793 1.43626855841487 0.0238055562168209 -1.26385161727168 -0.844750562839619 -0.21609898119153 -2.01037537047878 0.0589360857795083 0.949525826447634 -1.22456089341867 -2.44257333286184 1.48387967084851 0.674490759476595 -0.819024493650151 -0.378372865072236 -1.05286362454883 0 -1.09654053295025 NA -0.833745522130791 -0.188399425100716 -0.35291982004567 0.542482582512948 0.505868069607447 1.18035882908404 0.16862268986915 -2.52934034803723
[+] Show/hide bicluster #27 motif PSSM #1. bicluster 27 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0.1 0 0.9
2 0 0 0.2 0.8
3 0.2 0 0.3 0.5
4 0.3 0.1 0.2 0.4
5 0 0.4 0 0.6
6 0.1 0.9 0 0
7 0 0 1 0
8 0.8 0 0 0.2
9 0.718417 0.231583 0.031583 0.018417
10 0.118417 0.831583 0.031583 0.018417
11 0.618417 0.031583 0.231583 0.118417
12 0.718417 0.131583 0.031583 0.118417
13 0.1 0.3 0 0.6
14 0.1 0.2 0.1 0.6
15 0.3 0 0.7 0
16 0.3 0 0.1 0.6
17 0 0 0.4 0.6
18 0 0.6 0.4 0
19 0.2 0.3 0.3 0.2
20 0.6 0.4 0 0
21 0 0 0.5 0.5
22 1 0 0 0
23 0.3 0.2 0 0.5
24 0.5 0 0 0.5 [+] Show/hide bicluster #27 motif PSSM #2. bicluster 27 motif PSSM #2 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0.6 0.4 0 0
2 0 0 1 0
3 0.4 0.6 0 0
4 0.4 0 0.6 0
5 0.4 0 0.6 0
6 0 0 0 1
7 0 0 0.6 0.4
8 0 0 1 0
9 0 0.6 0 0.4
10 0.4 0.2 0 0.4
11 0.2 0.4 0 0.4
12 1 0 0 0
13 0 0 0.4 0.6
14 0 1 0 0
15 1 0 0 0
16 0 0.8 0.2 0
17 0.8 0.2 0 0
18 0 0 0 1
19 0 1 0 0
20 0 0.6 0 0.4
21 0 0 0 1 |