[+] Show/hide bicluster #59 rows and columns.
bicluster 59
Mycobacterium tuberculosis H37Rv
17x253
[+] Show/hide bicluster #59 rows (genes).
bicluster 59 genes
Mycobacterium tuberculosis H37Rv
17
[+] Show/hide bicluster #59 rows (short gene names).
bicluster 59 short names
Mycobacterium tuberculosis H37Rv
17
short_name
[+] Show/hide bicluster #59 rows (long gene names).
bicluster 59 long names
Mycobacterium tuberculosis H37Rv
17
long_name
[+] Show/hide bicluster #59 rows (NCBI RefSeq gene IDs).
bicluster 59 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
34
[+] Show/hide bicluster #59 gene upstream sequences.
bicluster 59 upstream sequences
Mycobacterium tuberculosis H37Rv
17
upstream
[+] Show/hide bicluster #59 columns (arrays; conditions).
bicluster 59 arrays
Mycobacterium tuberculosis H37Rv
253
[+] Show/hide bicluster #59 ratios.
bicluster 59 ratios
Mycobacterium tuberculosis H37Rv
17x253
GENES 2867:::H37Ra..7H9.shake.replicate.2 2867:::H37Ra..Sauton.s.media.replicate.3 2867:::H37Ra..Youman.media.replicate.4 2867:::H37Rv..Dubos.media.replicate.3 2867:::H37Rv..Sauton.s.media.replicate.3 2867:::H37Rv..Youman.media.replicate.1 2885:::H37Rv..7H9.roll.replicate.2 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.1 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.4 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.3 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.4 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.5 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.1 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.5 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.6 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.3 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.4 4082:::H37Rv.wild.type.Vs.Rv3676.null.1 4082:::H37Rv.wild.type.Vs.Rv3676.null.2 4082:::H37Rv.wild.type.Vs.Rv3676.null.4 4082:::Rv3676.null.Vs.H37Rv.wild.type.1 4082:::Rv3676.null.Vs.H37Rv.wild.type.2 4082:::Rv3676.null.Vs.H37Rv.wild.type.4 4084:::High.iron.wt.vs.low.iron.wt.1a 4084:::High.iron.wt.vs.low.iron.wt.2b 4084:::High.iron.wt.vs.low.iron.wt.3b 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.3 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.2 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.5 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.5 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.vs..MTB1254.rep1 4101:::NRP.Day8..2 4101:::NRP.Day8..3 4107:::DIPED..100ug.mL..DMSO..12h..2 4107:::DIPED..50ug.mL..DMSO..12h 4107:::DIPED.10ug.mL.vs.DMSO.12h.1 4107:::DIPED.5ug.mL.vs.DMSO.12h.2 4107:::H2O2.4mM.vs.ctrl.8h.1 4107:::pH5.2vspH6.8..2h. 4107:::X0.12mg.mL.PZA.pH5.6..2h. 4107:::X0.12mg.mL.PZAvspH5.6..10.5h. 4107:::X0.13mg.mL.TLMvsDMSO..6hA 4107:::X0.2mg.mL.TLMvsEtOH..6hA 4107:::X0.2ug.mL.Mtmvsctrl..2h.B 4107:::X0.5ug.mL.CeruleninvsDMSO..6hA 4107:::X1.2mg.mL.NamvspH5.6..5h. 4107:::X10ug.mL..241vsDMSO..6h 4107:::X10ug.mL.clotrimvsEtOH..6h 4107:::X10ug.mL.EconazolevsEtOH..6hA 4107:::X10ug.mL.Nvb.DMSO..6h..1 4107:::X10ug.mL.Nvb.DMSO..6h..2 4107:::X12ug.mLEthionamidevsEtOH.6hA 4107:::X25ug.mL.AntimycinvsDMSO..6h 4107:::X4ug.mLNaturalcompoundvsDMSO.6h 4107:::X50ug.mL.RoxvsEtOH..6hA 4107:::X50ug.mLAntimycinAvsDMSO..6hA 4107:::X60J.UV.ctrl..2h. 4363:::H37Rv.hypoxia.1.day.rep.6 4363:::H37Rv.hypoxia.4.day.rep.4 4363:::H37Rv.hypoxia.4.day.rep.6 4363:::H37Rv.hypoxia.7.day.rep.4 4363:::H37Rv.hypoxia.7.day.rep.6 4396:::Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.4 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.5 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.3 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.5 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep2 4570:::MTB.strain.TB294.SigA.overexpression.va.Ctrl.DS..rep1 4570:::MTB.strain.TB294.SigA.overexpression.vs.Ctrl..DS..rep2 4575:::Purified.Human.SP.A.Coated.2hrs.rep1 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep3 4575:::Whole.Lung.Surfactant.30min.rep.1 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.3 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.3 4615:::AA_30uM_10.min_07 4615:::AA_30uM_10min_03 4615:::AA_30uM_24h_T0_01 4615:::AA_30uM_2h_01 4615:::AA_30uM_30min_07 4615:::AA_3uM_10min_02 4615:::AA_60uM_2h_T0_01 4615:::Acetate.3mM.2h.05 4615:::Acetate.3mM.60m.04 4615:::CHP.AA.30m.1 4615:::CK_LA_2h 4615:::CK_LA_2h.3 4615:::CK_OA_NA_0.05_2h 4615:::CK.2.2h.for.OA.NA.and.PA.NA 4615:::CK.LA.2h.4 4615:::ETYA_3uM.AA_1h_02 4615:::Glycerol_1. 4615:::Glycerol_1._10M_01 4615:::L2A_30uM_10min_06 4615:::L2A_30uM_10min_07 4615:::L2A_30uM_1h_01 4615:::L2A_30uM_1h_06 4615:::L2A_30uM_30min_01 4615:::L2A_30uM_4h_07 4615:::MDG.MD.glycerol 4615:::MT1254.whiB4_CK_01 4615:::MTB1254_FA5_1h_01 4615:::MTB1254_Pellicle_21D_02 4615:::MTB1254.0485.1._ETYA_10m_01 4615:::MTB1254.0485.1._LA_10m_01 4615:::MTB1254.0485.1._OA_10m_03 4615:::MTB1254.0485.1._OA_10m_04 4615:::MTB1254.0485.1._PA_30m_01 4615:::MTB1254.3524.1._PA_12h_03 4615:::MTB1254.3524.1._PA_12h_05 4615:::MTB1254.B4.1._OA_10MIN_01 4615:::MTB1254.B4.1._PA_30MIN_01 4615:::MTB1254.B4.1._PA_30MIN_03 4615:::MTB1254.B4.1.Compl._OA_30MIN_01 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_01 4615:::MTB1254.Rv3524.2.compl._PA50.OA30_2h_02 4615:::MTB1254TA1_OA.30min_01 4615:::MTB889_PA50_1h_03 4615:::OA_50uM_10min_05 4615:::OA_50uM_10min_08 4615:::OA_50uM_1h_06 4615:::OA_50uM_1h_07 4615:::OA_50uM_1h_08 4615:::OA_50uM_24h_03 4615:::OA_50uM_2h_05 4615:::OA_50uM_2h..1.0..BSA.10mMGlu._30.min._01 4615:::OA_50uM_2h.1.0..BSA_30min_01 4615:::OA_50uM_30min_01 4615:::OA_50uM_30min_09 4615:::OA_50uM_4h_04 4615:::OA_50uM_4h_06 4615:::PA_100uM_2h_03 4615:::PA_100uM_4h_T0_01 4615:::PA_300uM_4h_T0_01 4615:::PA_5.uM_10min_02 4615:::PA_50uM_10min_08 4615:::PA_50uM_10min_T0_01 4615:::PA_50uM_12h_03 4615:::PA_50uM_1h_09 4615:::PA_50uM_24h_04 4615:::PA_50uM_24h_06 4615:::PA_50uM_24h_09 4615:::PA_50uM_2h_03 4615:::PA_50uM_2h_04 4615:::PA_50uM_2h_08 4615:::PA_50uM_4h 4615:::PA_50uM_4h_01 4615:::PA_50uM_4h_04 4615:::PA_50uM_4h_05 4615:::PA_50uM_4h_07 4615:::PA_50uM.AA_30uM_2h_04 4615:::PA_50uM.OA_10uM_12h_01 4615:::PA_50uM.OA_10uM_2h_01 4615:::PA_50uM.OA_10uM_2h_03 4615:::PA_50uM.OA_10uM_2h_04 4615:::PA_50uM.OA_10uM_30min_02 4615:::PA_50uM.OA_30uM_2h_01 4615:::PA_50uM.OA_30uM_30min_01 4615:::PA_5uM_10.min_01 4615:::Rv.3524.1._01 4615:::Rv.MT71_100603_01 4615:::Rv.MT90_100503_02 4615:::Rv.MT90_100803_01 4615:::Rv.pMV0481.1. 4615:::Spe_100uM_30M_01 4615:::Starvation_OA50_6h_03 4615:::Starvation_OA50_6h_04 4615:::TBD043 4615:::TBD044 4615:::TBD091 4615:::TBD094 4615:::TBD098 4615:::TBD1116 4615:::TBD622 4615:::TBE736 4615:::Test.2 4615:::Test.3 4615:::Test.5 4615:::WM_1254_10d_02 4615:::WM_1254_14d_02 4615:::X2.BA.OA.1 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.2 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.1 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.3 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.4hr.rep.1 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2 4699:::CDC1551.Ctrl.vs.H37Rv.rep.1 4699:::CDC1551.Ctrl.vs.H37Rv.rep.3 4703:::CDC1551.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4729:::H37Rv.wild.type.vs.PepD.null.mutant..DS..rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.1 4731:::X10ug.ml.Ethambutol.vs.DMSO.12hrs.3 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.4 4815:::H37Rv.reaeration.for.1hrs.rep.5 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.2 Rohde_CellHostMicrobe2007:::CDC1551.5.uM.cytochalasin.D.treatment.for.2hr.in.macrophages.vs.outside.macrophages
RV0610C 0.369363987332421 1.39715943034438 -0.819024493650151 -2.32859905057396 0.562075632897163 -0.754787278461904 0.629524708844822 -0.674490759476595 -1.34898151895319 1.10809196199726 0.770846582258966 -0.578134936694224 -0.529957025303039 -0.385423291129483 NA -0.05 -0.65 0 0.2 1.9 1.5 -0.155651713725368 0.752316616339279 -0.518839045751227 0.155651713725368 -0.752316616339279 0.518839045751227 -0.2 -0.1 0.25 -0.593551868339404 -1.42992041009038 NA -0.998246324025361 0.107918521516255 -0.674490759476595 1.45690004046945 1.02522595440442 1.10616484554162 1.40294077971132 0.377714825306893 2.02347227842979 1.51085930122757 1.83461486577634 -0.91730743288817 -1.61877782274383 -1.53783893160664 -0.836368541750978 -0.998246324025361 -0.485633346823149 -0.512612977202212 0.971266693646297 1.10616484554162 2.18535006070417 -0.107918521516255 0.728450020234723 0.161877782274383 0.917307432888169 0.782409280992851 -0.134898151895319 -0.0306586708852998 0.0153293354426499 1.15060188381302 0.23805556216821 -0.7935185405607 -0.39675927028035 -0.436435197308385 0 0.436435197308385 1.26962966489712 -0.912546321644805 -0.833194467588735 1.19027781084105 -0.47611112433642 0.436435197308385 1.86476857031765 -0.63481483244856 -0.595138905420525 -0.674490759476595 -0.87287039461677 -0.912546321644805 NA -0.436435197308385 NA 0.07935185405607 0.515787051364455 NA NA NA NA NA NA -0.863348172130042 0.0809388911371915 0.809388911371914 -1.51085930122757 -0.809388911371914 -0.089932101263546 -0.224830253158865 -0.224830253158865 0.719456810108368 0.0449660506317731 0.406835696192232 1.1348574683257 -0.406835696192232 0.277731489196245 0.357083343252315 0.383533961271005 0.283996109253303 -1.46139664553262 -0.827784113903094 0.388343164547131 -0.286147594929465 1.27403810123357 -1.49886835439243 1.19909468351395 -0.711962468336406 -1.0492078480747 -0.89932101263546 NA 0.187358544299054 -1.0492078480747 -0.524603924037352 -1.386453227813 -2.0609439872896 -0.299773670878487 -0.786905886056028 -1.49886835439243 0.412188797457919 -0.487132215177541 0.0374717088598109 NA -1.16162297465414 0.262301962018676 0.412188797457919 -0.637019050616784 -0.562075632897163 NA -1.27403810123357 -0.599547341756973 -0.786905886056028 -0.0374717088598108 -1.42392493667281 -2.13588740500922 -2.73543474676619 1.76117031641111 1.94852886071016 2.09841569614941 -1.08667955693451 -0.0749434177196217 -1.68622689869149 0.861849303775649 -0.374717088598108 -0.112415126579433 1.64875518983168 1.94852886071016 -1.23656639237376 -0.44966050631773 0.524603924037352 NA -2.32324594930827 0.0749434177196217 1.7236986075513 0.149886835439243 0.936792721495271 -0.149886835439243 -1.46139664553262 -1.53634006325224 -0.711962468336406 NA 0.0374717088598109 0 -0.749434177196217 -1.83611373413073 -1.94852886071016 0.637019050616784 1.16162297465414 7.15709639222387 10 0.749434177196217 0.599547341756974 -0.861849303775649 5.47086949353238 -0.299773670878487 2.13588740500922 3.74717088598108 2.66049132904657 NA -1.01173613921489 -0.637019050616784 0.112415126579433 -0.861849303775649 -1.83611373413073 -1.87358544299054 0 -0.936792721495271 0.262301962018676 0.149886835439243 0 -0.412188797457919 0.89932101263546 -0.0749434177196217 1.76117031641111 -0.786905886056028 NA 1.386453227813 -0.299773670878487 -0.224830253158865 0.224830253158865 -2.51060449360733 -0.824377594915839 0 -0.262301962018676 NA -1.27403810123357 0.711962468336406 0.149886835439243 0 -2.47313278474752 1.27439840612645 -0.301575195342901 0.346880962016534 0.963558227823707 0.958834903177513 -0.140827740989619 NA -0.667078773108721 -1.05991405060608 0.346360119731225 1.07553931916538 1.00262139922197 -0.0182294799858539 1.54950579879758 0.783867639391719 -0.398193339931966 1.12956886225598 -0.690743548861573 0.126467017401862 0.98644273573452 -0.744265665629346 0.372132832814673 -0.152304365043102 -1.35 0.4 -0.05 0.15 5 0.210778362336436 NA 0.805521455 -0.00884330999999999 NA 0.632150771139682
RV0661C NA NA NA NA NA NA -0.674490759476595 0.3 -1.41643059490085 -0.0674490759476595 0.438418993659787 -0.640766221502765 -0.505868069607446 0.404694455685957 NA NA NA NA NA NA NA -0.0337245379738298 0.674490759476595 -0.741939835424255 0.0337245379738298 -0.674490759476595 0.741939835424255 NA NA NA NA -2.47313278474752 -2.64175547461666 -2.50123656639237 -0.927424794280318 -0.224830253158865 0.393452943028014 0.309141598093439 0.815009667700886 1.23656639237376 0.281037816448581 0.702594541121453 0.505868069607446 1.01173613921489 -0.0562075632897163 0.224830253158865 -0.393452943028014 -0.140518908224291 0 -0.365349161383156 -0.421556724672872 1.93916093349521 1.32087773730833 1.65812311704663 -0.533971851252305 -0.0281037816448582 1.15225504743918 1.23656639237376 1.2084626107289 -0.75880210441117 0.209324718458254 0.581457551272927 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.730698322766312 -0.468396360747636 -0.693226613906501 0.20609439872896 0.580811487327068 1.19684074613892 NA NA NA NA -0.39163979582512 -1.00085725599753 -0.174062131477831 -0.0870310657389155 -0.522186394433493 -0.261093197216747 NA NA NA 1.05448555354792 -1.18748373147288 0.0664990889624813 0.038912928431342 NA NA NA NA 0.767523967680264 NA -0.279099624611005 1.37223982100411 -0.930332082036683 -0.604715853323844 2.67470473585546 -0.907073779985766 0.39539113486559 -0.651232457425678 -1.13965680049494 NA -0.209324718458254 -0.0232583020509171 -2.13976378868437 NA -1.58156453946236 -1.81414755997153 2.0467305804807 NA -0.0697749061527512 0.116291510254585 0.0465166041018342 -0.674490759476595 NA -0.488424343069258 -0.0232583020509171 -0.209324718458254 -0.744265665629346 -0.814040571782098 -0.814040571782098 -0.302357926661922 -1.34898151895319 -0.581457551272927 -0.674490759476595 -0.39539113486559 -0.348874530763756 -0.930332082036683 -0.116291510254585 -1.48853133125869 -0.9535903840876 1.46527302920778 1.37223982100411 -0.581457551272927 -0.0465166041018342 0.232583020509171 NA -2.1862803927862 0.232583020509171 3.86087814045223 0.604715853323844 1.72111435176786 -1.00010698818943 NA -1.27920661280044 -0.976848686138517 NA 0 0.139549812305502 -0.372132832814673 -0.255841322560088 -0.79078226973118 1.55830623741144 -0.39539113486559 NA NA -0.255841322560088 -0.0465166041018342 0.9535903840876 NA 1.00010698818943 0.860557175883932 2.20953869483712 1.37223982100411 NA -1.37223982100411 -0.39539113486559 0.651232457425678 -0.9535903840876 -0.767523967680263 -0.79078226973118 0.16280811435642 -0.0930332082036683 -0.116291510254585 0.116291510254585 0.232583020509171 0.116291510254585 NA -0.441907738967424 -0.348874530763756 -2.93054605841555 -1.20943170664769 2.02347227842979 1.27920661280044 1.65133944561511 1.32572321690227 -0.16280811435642 -0.16280811435642 3.41897040148481 -0.16280811435642 -1.13965680049494 -0.0697749061527512 0.697749061527512 0.883815477934849 1.23269000869861 0.465166041018342 1.10447861864292 -0.722267188272854 0.400478888439228 -0.23185619857008 -1.4 -1.41185777619253 -0.69163882963278 -0.771663157028308 0.0743083040101333 0.469210963114153 1.05572466700684 0 0.0879770555839037 1.75954111167807 0.469210963114153 -0.20963901983732 0.282556939780736 -0.884129779313915 0.73189422836822 NA 0.15 -0.1 0 -1.91808309726157 -1.79161607985971 0.400478888439228 NA 0.394513463090084 NA NA 0.826167738257209 NA NA -0.27875
RV0662C NA NA NA NA NA NA -0.263931166751711 -0.112415126579433 -0.709080029193344 0.190240983442117 1.91970446927954 0.12106244400862 -0.709080029193344 0.259419522875614 NA NA NA NA NA NA NA -0.674490759476595 -0.630975226607137 -0.674490759476595 0.674490759476595 0.630975226607137 0.674490759476595 -0.421556724672872 -0.740066249981264 -0.496500142392494 -1.478691280391 -1.03767809150245 -1.1414459006527 NA -0.0778258568626841 -1.32303956666563 1.78999470784173 1.37492347124075 -0.155651713725368 1.06362004379002 0.38912928431342 0.57072295032635 0.907968330064647 1.1414459006527 -0.207535618300491 -1.16738785294026 -0.830142473201963 -0.674490759476595 -0.311303427450736 -0.830142473201963 -0.596664902613911 1.99753032614222 2.02347227842979 1.24521370980294 -0.38912928431342 -0.0259419522875613 0.985794186927332 0.95985223463977 1.34898151895319 -1.19332980522782 0.885269121813031 0.421556724672872 0.63481483244856 0.198379635140175 -1.22995373786909 -0.912546321644805 -1.74574078923354 1.15060188381302 0.55546297839249 1.62671300814944 0 -0.47611112433642 -0.436435197308385 -0.119027781084105 -0.119027781084105 0.991898175700875 0.357083343252315 -0.31740741622428 0.23805556216821 1.5870370811214 0.47611112433642 -1.34898151895319 0.991898175700875 0 -0.912546321644805 -0.198379635140175 NA NA NA NA NA 0 NA NA NA NA -1.75367597463915 0 0.089932101263546 0.314762354422411 NA -0.674490759476595 NA NA NA 1.06207127051912 0.166105933303938 -0.00503351313042236 -0.05 NA NA NA NA 1.02779544301195 -1.0920326582002 -0.44966050631773 -0.0963558227823707 0.160593037970618 -0.995676835417831 0.80296518985309 -0.642372151882472 -0.770846582258966 -0.546016329100101 0.0642372151882471 -0.513897721505977 -0.385423291129483 -0.835083797447213 1.0920326582002 1.41321873414144 -0.481779113911854 -0.770846582258966 3.50092822775947 0.546016329100101 0.289067468347112 0.995676835417831 -0.642372151882472 -0.0963558227823707 NA -0.0321186075941236 -1.47745594932968 -1.15626987338845 -1.60593037970618 -1.28474430376494 -0.0321186075941236 -1.83076063286504 -1.25262569617082 1.70228620248855 1.18838848098257 0.0642372151882471 0 -0.256948860752989 0.321186075941236 -1.54169316451793 -0.44966050631773 3.27609797460061 1.31686291135907 -1.18838848098257 -1.12415126579433 1.47745594932968 -3.17974215181823 -0.738727974664842 -0.867202405041337 1.05991405060608 0.963558227823707 0.289067468347112 -0.160593037970618 -1.34898151895319 -1.6380489873003 0 1.7665234176768 0.44966050631773 -1.0920326582002 -0.44966050631773 -0.417541898723607 -0.192711645564741 0.513897721505977 1.34898151895319 NA 10 2.3125397467769 1.73440481008267 0.44966050631773 5.01050278468328 0.867202405041337 2.60160721512401 2.28042113918277 2.98703050625349 NA -0.192711645564741 -1.38110012654731 1.34898151895319 -0.192711645564741 -0.128474430376494 -3.69363987332421 1.05991405060608 -1.38110012654731 NA -1.92711645564741 0.642372151882472 0.481779113911854 0.835083797447213 -0.44966050631773 0.256948860752989 -1.25262569617082 -1.89499784805329 1.60593037970618 -0.321186075941236 0.578134936694224 1.28474430376494 -2.63372582271813 0.353304683535359 1.41321873414144 -0.0642372151882472 -0.321186075941236 -0.513897721505977 0.321186075941236 2.37677696196514 1.0920326582002 -0.160593037970618 0.547790837806958 -0.883172983403056 NA NA NA -4.00271565459881 NA -0.409117345912033 -0.232201736868992 -0.250973305851756 0.847034907249678 0.69017659109233 -0.125486652925878 0.847034907249678 1.31760985572172 0.106498540969989 0.556159047287719 -1.00581955360545 0.902627339887796 0.347164361495306 -2.45 0.25 -0.925 0.45 -1.35 1.15 NA NA 0.0204391139235332 -0.524603924037352 NA NA NA -0.6285
RV1061 NA NA NA NA NA NA NA 0.25 -0.887487841416573 1.98797276477312 -0.532492704849944 -0.24849659559664 0.461493677536618 -1.06498540969989 NA NA NA NA NA NA NA -0.35 0.45 -0.55 0.35 -0.45 0.55 -0.637019050616784 0.149886835439243 -0.711962468336406 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.07935185405607 -0.674490759476595 -0.71416668650463 -0.55546297839249 0 1.50768522706533 0.357083343252315 0.833194467588735 -0.277731489196245 -0.47611112433642 -0.39675927028035 0.47611112433642 -0.991898175700875 0.753842613532665 -0.07935185405607 0 0.39675927028035 0.119027781084105 -0.119027781084105 -0.55546297839249 0 -0.119027781084105 -0.63481483244856 -0.119027781084105 NA NA NA NA NA 0.4 -0.95 0.1 0.0499999999999999 0.4 -1.575 -1.075 0.0749999999999999 0.425 NA 0.575 NA NA NA 0.324274403594517 -1.38789444738453 1.10253297222136 1.05 -0.674490759476595 0.464649189861654 0.254807620246714 0.434671822773806 2.1583704303251 -1.45015513287468 NA 0.472143531633617 -1.21408336705787 -0.505868069607446 NA -1.18035882908404 -1.18035882908404 -0.741939835424255 -1.04546067718872 -0.0674490759476595 0.168622689869149 NA -0.910562525293404 NA -1.2478079050317 -1.18035882908404 NA NA 0.539592607581276 0.910562525293404 -0.404694455685957 -0.168622689869149 NA -1.68622689869149 0.269796303790638 -0.640766221502765 -1.31525698097936 -0.674490759476595 -2.36071765816808 -1.78740051261298 -0.674490759476595 -0.101173613921489 0.607041683528936 -1.2478079050317 0.134898151895319 -1.31525698097936 -0.202347227842979 -1.48387967084851 0.0674490759476595 0.809388911371914 0.708215297450425 -2.59678942398489 -1.04546067718872 1.95602320248213 -3.43990287333064 NA 0.674490759476595 3.43990287333064 0.843113449345744 2.19209496829893 -0.303520841764468 -3.43990287333064 -1.18035882908404 0.134898151895319 NA 0.809388911371914 0.303520841764468 -0.370969917712127 -0.573317145555106 -0.944287063267233 0.472143531633617 1.48387967084851 NA NA 0.438418993659787 1.14663429111021 0.236071765816808 NA 2.25954404424659 NA 1.11290975313638 2.79913665182787 NA -1.58505328477 -0.168622689869149 1.28153244300553 -0.640766221502765 -1.45015513287468 -4.35046539862404 0.101173613921489 -1.21408336705787 -0.134898151895319 0 0.370969917712127 0.708215297450425 0.640766221502765 -0.101173613921489 0.101173613921489 -4.31674086065021 -2.32699312019425 0.944287063267233 -0.303520841764468 0.269796303790638 0.472143531633617 -2.90031026574936 -0.337245379738298 1.18035882908404 0.404694455685957 -1.34898151895319 -1.07918521516255 2.19209496829893 1.88857412653447 0.775664373398084 -0.607041683528936 1.4965263725887 -1.07496964791582 -1.29962853655246 0.0822549706678774 0.674490759476595 -1.21011577435507 NA 0.367002325009324 -0.367002325009324 0.0116291510254585 1.33735236792773 -0.662861608451137 0.593086702298385 1.01173613921489 0.802411420756639 -0.686754227830715 1.29992764553671 -1.42256232907791 0.867202405041337 -0.578134936694225 NA NA NA -0.25 0 0.45 NA NA 0.273008164550051 -0.418072784799543 NA NA NA 0.0145
RV1062 NA NA NA NA NA NA NA -0.57072295032635 -0.607041683528936 2.09092135437744 0.741939835424255 -0.303520841764468 0.370969917712127 0.741939835424255 NA NA NA NA NA NA NA -0.57072295032635 0.596664902613911 -0.933910282352209 0.57072295032635 -0.596664902613911 0.933910282352209 -0.1 -0.85 -0.35 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.0492078480747 -0.524603924037352 -1.49886835439243 -1.27403810123357 0.374717088598108 0.861849303775649 1.23656639237376 2.47313278474752 -0.112415126579433 0.44966050631773 0.412188797457919 0 0.44966050631773 0.374717088598108 0.224830253158865 0.112415126579433 -0.487132215177541 0.89932101263546 -0.299773670878487 0 0.412188797457919 -0.487132215177541 -0.974264430355082 0.562075632897163 0.85515792719354 0.951513749975911 0.75880210441117 0.734713148715577 -0.036133433543389 0.458653716444085 -0.4 1 0.25 -1.1 -1.23656639237376 -0.936792721495271 0.674490759476595 0.749434177196217 0.0374717088598109 0.224830253158865 NA NA NA 1.32336794580851 0.435430743459574 0.350052166310638 -0.089932101263546 0.0210778362336436 -0.709620486532668 0.906346958046675 -0.217804307747651 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.32952505473752 -0.214021106372381 -0.433601202520668 0.433601202520668 0.67124801544065 NA -0.674490759476595 -0.524603924037352 0 -0.137964018983849 1.45628686705174 -0.137964018983849 0.321916044295648 1.64023889236354 1.82419091767534 -0.023805556216821 0.722101871910237 -1.89650931194007 -0.29508970727101 0.210778362336436 -0.674490759476595 1.87893854425623 -0.643832088591295 0 0.05 NA -0.267470473585546 NA -0.578134936694224 0.0565701927302951 NA NA NA 0.598326764921149
RV1576C NA NA NA NA NA NA 0 -0.0120444778477964 -0.674490759476595 0.477764287962588 -0.674490759476595 -0.927424794280318 -0.393452943028014 0.702594541121453 -0.381010047337924 -0.458241813690206 NA -0.834103076604644 -0.700234681594022 0.746573741405392 0.489134520231119 NA NA NA NA NA NA -1.225 -1.225 -1.325 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.17020083571843 NA -1.47833591118158 -1.18266872894526 -1.84791988897697 -1.90335748564628 0.794605552260098 0.757647154480559 -0.498938370023783 0.646771961141941 -0.739167955590789 -0.166312790007928 -0.831563950039638 -0.628292762252171 0.406542375574934 1.68160709896905 0.110875193338618 -0.110875193338618 0.997876740047566 1.90335748564628 -1.27506472339411 -0.295667182236316 0.184791988897697 -0.813084751149868 0 -0.554375966693092 0.706524621404244 0.603304399637377 0.674490759476595 0.767033027267579 -0.0676270418472576 0.615839389087326 0.106498540969989 0.496993191193281 1.95247325111646 -0.319495622909966 NA 0.224830253158865 0.578134936694224 -0.160593037970618 0.417541898723607 -0.835083797447213 NA NA NA -0.280307848094169 -1.55921240502382 0.683250379729538 -0.354540014596672 -1.0492078480747 -1.50568139236694 0.177138987337288 -0.218017215184354 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.18303537971689 -0.947498924026646 -0.825 -0.0749999999999999 0.377545142096962 0.78440777213204 0.774415316436091 -1.15412863288217 -0.0849358734155713 0.0613173417705995 -0.117060379743872 -0.663342151881941 1.5552307594543 0.306586708852998 1.53293354426499 -0.433094066611288 1.04368570150589 -0.646091148551265 0.658620388665381 0.293601860007459 -0.59 0 -0.134898151895319 -0.175 -0.375 -0.025 1.26609917986496 NA 0.497838417708916 -0.380999770323107 -0.00718038250000025 NA NA -0.129987241505435
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RV3840 -0.85198832775991 1.63297762820649 NA -2.66246352424972 0.283996109253303 -0.177497568283315 -0.44966050631773 -0.0259419522875614 1.66296859664057 0.662861608451137 -0.941961233062142 -0.313987077687381 -0.569828400247468 0.918702931011224 NA NA NA NA NA NA NA -0.477764287962588 1.15225504743918 -0.674490759476595 0.477764287962588 -1.15225504743918 0.674490759476595 0.187930631457219 0.0128719610587137 -0.0128719610587136 -0.674490759476595 -1.2035031198504 -1.28285497390647 -0.304182107214935 -1.83831795229896 0.886095703626115 1.22995373786909 1.17705250183171 0.251280871177555 1.36220682796254 -0.092577163065415 1.75896609824289 1.83831795229896 1.04479941173826 -0.542237669383145 -1.22995373786909 -0.542237669383145 -0.357083343252315 -0.991898175700875 -0.277731489196245 -0.568688287401835 3.3195525613456 3.47825626945774 2.28797845861669 -0.330632725233625 -0.277731489196245 2.57893525682228 1.33575620994385 1.65316362616813 -1.15060188381302 0.564689938166452 0.203915811004552 -0.296775934169702 0.0539592607581276 -0.458653716444085 -1.16012410629974 -0.377714825306893 0.485633346823149 -0.296775934169702 NA -0.0809388911371915 -0.431674086065021 0.377714825306893 -0.458653716444085 -0.782409280992851 0.0809388911371914 -0.0539592607581277 -0.215837043032511 0.512612977202212 -0.161877782274383 0.0539592607581276 -0.944287063267233 2.56306488601106 0.431674086065021 -0.0809388911371915 0 NA NA NA NA NA NA 0.775 0.725 1.175 -2.025 -0.730698322766311 -0.281037816448581 0.702594541121453 1.99536849678493 NA -0.75880210441117 NA NA NA 0.190616953765125 -0.16129126857049 0.923759083630989 NA NA NA NA NA 2.07743153918791 0.0539592607581276 0.188857412653447 0.674490759476595 -0.512612977202212 -0.161877782274383 0.620531498718468 -0.296775934169702 -1.13314447592068 1.05220558478349 -0.971266693646297 NA NA -0.404694455685957 -0.809388911371914 1.45690004046945 -1.67273708350196 -2.26628895184136 1.64575745312289 -1.64575745312289 0.269796303790638 0.674490759476595 0.0539592607581276 -1.29502225819506 NA -0.431674086065021 -0.296775934169702 -1.61877782274383 -1.51085930122757 -0.890327802509106 -2.02347227842979 -1.83461486577634 -0.998246324025361 1.24106299743694 1.02522595440442 -1.07918521516255 0.21583704303251 -0.593551868339404 0.944287063267233 -1.02522595440442 -0.647511129097532 2.37420747335762 1.8615944961554 NA -0.620531498718468 0.971266693646297 -0.674490759476595 0.107918521516255 -0.728450020234723 1.02522595440442 0.620531498718468 0.431674086065021 -1.18710373667881 0 -2.29326858222042 -2.10441116956698 1.29502225819506 0.998246324025361 -0.188857412653447 -0.0809388911371914 0.21583704303251 0.35073519492783 0.863348172130042 0.56657223796034 NA NA 2.18535006070417 1.10616484554162 1.24106299743694 NA 0.863348172130042 2.88682045055983 2.59004451639013 3.07567786321327 4.37070012140834 -0.890327802509106 -1.83461486577634 0.458653716444085 -0.431674086065021 -1.16012410629974 -2.69796303790638 0.458653716444085 -2.10441116956698 0.674490759476595 -0.728450020234723 0.35073519492783 0.539592607581276 1.75367597463915 -0.377714825306893 0.56657223796034 NA -0.890327802509106 1.18710373667881 -0.91730743288817 1.13314447592068 0.863348172130042 -1.91555375691353 -0.56657223796034 1.40294077971132 -1.10616484554162 0.269796303790638 -0.107918521516255 1.02522595440442 1.05220558478349 0.890327802509106 -1.29502225819506 1.42486172939431 -0.784095507891542 -0.901847195255223 0.234934983637915 1.40366995891075 -2.66117263284402 -1.60651435438971 -0.968813999975473 -0.674490759476595 0.457690158216261 -0.192711645564742 -1.92711645564741 0.120444778477963 0.62631284808541 1.61396003160471 -0.529957025303039 0.722668670867781 -1.77053824362606 0.0591658560944382 -0.236663424377753 -0.674490759476595 0 -0.328130639745371 0.1 -0.15 -0.15 1.40086542352831 0.674490759476595 NA -0.674490759476595 NA NA NA -0.0476457135327943
[+] Show/hide bicluster #59 motif PSSM #1. bicluster 59 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0.545455 0 0 0.454545
2 0 0.090909 0.636364 0.272727
3 0.181818 0 0.545455 0.272727
4 0 0.727273 0.090909 0.181818
5 0.272727 0 0.727273 0
6 0.181818 0.181818 0.636364 0
7 0.909091 0.090909 0 0
8 0.363636 0.363636 0.181818 0.090909
9 0.272727 0.181818 0.272727 0.272727
10 0.363636 0.545455 0 0.090909
11 0 0.454545 0 0.545455
12 0 0.545455 0.181818 0.272727
13 0 0.545455 0.363636 0.090909
14 0 0.363636 0.545455 0.090909
15 0.727273 0 0.272727 0
16 0.818182 0.090909 0 0.090909
17 0 0.727273 0.272727 0
18 0.636364 0 0.181818 0.181818
19 0 0.636364 0.363636 0
20 0 0.818182 0 0.181818
21 0.272727 0 0.636364 0.090909
22 0 0.545455 0.090909 0.363636
23 0 1 0 0
24 0 0 0.909091 0.090909 [+] Show/hide bicluster #59 motif PSSM #2. bicluster 59 motif PSSM #2 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0.8 0.2 0 0
2 0.2 0 0.6 0.2
3 1 0 0 0
4 0.4 0.2 0.4 0
5 0 0.6 0.4 0
6 1 0 0 0
7 0 1 0 0
8 0 0.2 0.4 0.4
9 1 0 0 0
10 0 0 0.8 0.2
11 0 0 0 1
12 0 0 0.2 0.8
13 1 0 0 0
14 0 0 0.4 0.6
15 0 1 0 0 |