|
[+] Show/hide bicluster #94 rows and columns.
bicluster 94
Mycobacterium tuberculosis H37Rv
7x235
[+] Show/hide bicluster #94 rows (genes).
bicluster 94 genes
Mycobacterium tuberculosis H37Rv
7
[+] Show/hide bicluster #94 rows (short gene names).
bicluster 94 short names
Mycobacterium tuberculosis H37Rv
7
short_name
[+] Show/hide bicluster #94 rows (long gene names).
bicluster 94 long names
Mycobacterium tuberculosis H37Rv
7
long_name
[+] Show/hide bicluster #94 rows (NCBI RefSeq gene IDs).
bicluster 94 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #94 gene upstream sequences.
bicluster 94 upstream sequences
Mycobacterium tuberculosis H37Rv
7
upstream
[+] Show/hide bicluster #94 columns (arrays; conditions).
bicluster 94 arrays
Mycobacterium tuberculosis H37Rv
235
[+] Show/hide bicluster #94 ratios.
bicluster 94 ratios
Mycobacterium tuberculosis H37Rv
7x235
GENES 2867:::H37Ra..7H9.shake.replicate.4 2867:::H37Ra..Dubos.media.replicate.3 2867:::H37Ra..Dubos.media.replicate.4 2867:::H37Ra..Sauton.s.media.replicate.3 2867:::H37Ra..Youman.media.replicate.1 2867:::H37Ra..Youman.media.replicate.2 2867:::H37Rv..7H9.shake.replicate.2 2867:::H37Rv..7H9.shake.replicate.3 2867:::H37Rv..Sauton.s.media.replicate.3 2867:::H37Rv..Sauton.s.media.replicate.4 2867:::H37Rv..Youman.media.replicate.1 2867:::H37Rv..Youman.media.replicate.2 2885:::Strain.1006...replicate.1 2885:::Strain.1843..replicate.1 2885:::Strain.3160..replicate.1 2885:::Strain.3160..replicate.2 2885:::Strain.3160..replicate.4 2885:::Strain.9800608...replicate.3 2885:::Strain.9802826..replicate.2 2885:::Strain.9802826..replicate.3 2885:::Strain.9802826..replicate.4 2885:::Strain.H37Ra..replicate.4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.1 4060:::H37Rv.wild.type.Vs.H37Rv.sigE.null.mutant.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration.rep3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.2 4084:::High.iron.wt.vs.low.iron.wt.2a 4084:::High.iron.wt.vs.low.iron.wt.3a 4084:::High.iron.wt.vs.low.iron.wt.3b 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.5 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1 4101:::H37Rv.Day14.1 4101:::H37Rv.Day14.2 4101:::H37Rv.Day14.3 4101:::H37Rv.Day24.2 4101:::H37Rv.Day6.1 4101:::H37Rv.Day60.1 4101:::H37Rv.Day60.2 4101:::H37Rv.Day8.1 4101:::H37Rv.Day8.2 4101:::H37Rv.Day8.3 4101:::NRP.Day10..2 4101:::NRP.Day12..2 4101:::NRP.Day12..3 4101:::NRP.Day14..1 4101:::NRP.Day14..2 4101:::NRP.Day14..4 4101:::NRP.Day20..2 4101:::NRP.Day30..1 4101:::NRP.Day6..3 4107:::DIPED.50ug.mL.vs.DMSO.12h.1 4107:::EMB..10ug.mL..DMSO..12h 4107:::H2O2.4mM.vs.ctrl.8h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.2 4107:::UV.40J.vs.8h.2 4107:::UV.40J.vs.ctrl.12h.1 4107:::X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053. 4107:::X0.02mM.GSNOvsDMSO..6h 4107:::X0.05mM.palmitatevs10mM.gluc 4107:::X0.1mMGSNO.10ug.mLmdvsDMSO.6hA 4107:::X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA 4107:::X0.1mMGSNO.5ug.mLKCNvsDMSO.6h 4107:::X0.1ug.mL.RifpvsEtOH..6hA 4107:::X0.2ug.mL.Mtmvsctrl..2h. 4107:::X0.2ug.mL.Mtmvsctrl..2h.C 4107:::X0.2ug.mL.Mtmvsctrl..4h.B 4107:::X0.2ug.mL.Mtmvsctrl..6h. 4107:::X0.4mM.NaN3vsDMSO..4h.A 4107:::X1.2mg.mL.NamvspH5.6..5h. 4107:::X1.2mg.mL.PZA.pH5.6..2h.. 4107:::X10ug.mL.capreomycinvsEtOH..6h 4107:::X10ug.mL.CapvsEtOH..6h 4107:::X10ug.mL.clotrimvsEtOH..6h 4107:::X10ug.mL.LevovsEtOH..6hA 4107:::X10ug.mL.Nvb.DMSO..6h..2 4107:::X10ug.mL.Nvb.DMSO..6h..3 4107:::X10ug.mL.RoxvsEtOH..6h 4107:::X10ug.mL.RoxvsEtOH..6hA 4107:::X10uM.CCCP.DMSO..6h 4107:::X12ug.mLEthionamidevsEtOH.6hA 4107:::X1ug.mL..111891.DMSO..12h..1 4107:::X1ug.mL..121940.DMSO..12h 4107:::X1ug.mL..241vsDMSO..6hA 4107:::X20ug.mL.KCN.DMSO..6h 4107:::X20ug.mLProcept6778vsDMSO.6hB 4107:::X24ug.mL.cltrmazole.DMS..6h..1 4107:::X24ug.mL.cltrmazole.DMS..6h..3 4107:::X2mM.DTNBvsDMSO 4107:::X2mM.DTTvsDMSO..6h.A 4107:::X30ug.mL.RoxvsEtOH..6hA 4107:::X40ug.mL.5CL.pH5.6..4h..1 4107:::X4mM.H2O2.ctrl..4h...1 4107:::X4mM.H2O2.ctrl..4h...2 4107:::X50ug.mL.Triclosan.DMSO..6h 4107:::X5ug.mL.OfloxvsEtOH..6hA 4107:::X7d.Dubos.NRP.1vsDubos.log.phase 4363:::H37Rv.hypoxia.1.day.rep.5 4363:::H37Rv.hypoxia.4.day.rep.7 4364:::H37dosR.mutant.hypoxia.1.day.rep.5 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.1 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.2 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4396:::Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.4 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.1 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.2 4583:::X20ug.ml.KCN.vs.DMSO.6hrs 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages.rep.1 4615:::AA_10uM_2h_T0_01 4615:::AA_30uM_1h_03 4615:::AA_30uM_1h_04 4615:::AA_30uM_1h_05 4615:::AA_30uM_1h_07 4615:::AA_30uM_24h_T0_01 4615:::AA_30uM_2h_04 4615:::Acetate.3mM.10m.07 4615:::Acetate.3mM.60m.02 4615:::CK.2.2h.for.OA.NA.and.PA.NA 4615:::CK.for.AA.NA.24h 4615:::CK.MDG.2h.for.PA.NA.2 4615:::ETYA_30uM_10min.05 4615:::L2A_30uM_10min_06 4615:::L2A_30uM_1h_05 4615:::L2A_30uM_1h_06 4615:::L2A_30uM_1h_09 4615:::L2A_30uM_2h_03 4615:::L2A_30uM_2h_05 4615:::L2A_30uM_30min_03 4615:::L2A_30uM_30min_05 4615:::LAA_50uM_10min_01 4615:::MDG_1254.pMV261.3524_03 4615:::MDG.MD.glycerol 4615:::MDGCy3.7H9Cy5.01 4615:::MDGCy3.7H9Cy5.02 4615:::MDGCy3.7H9Cy5.03 4615:::MTB1254_Bottom_14D_02 4615:::MTB1254_Bottom_14D_03 4615:::MTB1254_Pellicle_10D_01 4615:::MTB1254_Pellicle_10D_03 4615:::MTB1254_Pellicle_42D_03 4615:::MTB1254.0485.1._PA_10m_02 4615:::MTB1254.0485.1._PA_30m_01 4615:::MTB1254.0485.1._PA_30m_03 4615:::MTB1254.3524.1._OA_10min_04 4615:::MTB1254.B4.1.Compl._PA_30MIN_01 4615:::MTB1254.B4.1.Compl._PA_30MIN_04 4615:::MTB1254.Rv3524.2._PA50.OA30_2h_02 4615:::MTB1254vsMTB1254.0485.1. 4615:::MTB1370_PA50_1h_01 4615:::MTB1370_PA50_1h_03 4615:::MTB889_PA50_1h_02 4615:::OA_50uM_1h_06 4615:::OA_50uM_2h_01 4615:::OA_50uM_2h_03 4615:::OA_50uM_2h_06 4615:::OA_50uM_4h_08 4615:::OA50um_10min.10mM_G_20min 4615:::PA_100uM_2h_03 4615:::PA_100uM_2h_04 4615:::PA_100uM_2h_T0_05 4615:::PA_50uM_10min_10 4615:::PA_50uM_1h_10 4615:::PA_50uM_24h_06 4615:::PA_50uM_30.min_04 4615:::PA_50uM_30.min_06 4615:::PA_50uM_30min_02 4615:::PA_50uM_4h_T0_01 4615:::PA_50uM.0.5.BSA_4h_01 4615:::PA_50uM.AA_30uM_2h_02 4615:::PA_50uM.OA_10uM_2h_01 4615:::PA_50uM.OA_10uM_2h_02 4615:::PA_50uM.OA_10uM_4h_04 4615:::PA_50uM.OA_30uM_2h_01 4615:::Rv_Rv3524.1_OA_10min 4615:::Starvation_T0 4615:::Succinate_10mM_30min_01 4615:::TBD091 4615:::TBD097 4615:::TBD662 4615:::TBD816 4615:::Tet_50ng_30M_01 4615:::WT_85.1_PA_10min_02 4615:::X2.BA_500uM_30min_01 4615:::X2.BA.1 4615:::X2.BA.OA.1 4615:::X7H9_PA_50uM_4h_T0_02 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.3 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.3 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak24hr.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1 4704:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4729:::H37Rv.wild.type.vs.PepD.null.mutant..DS..rep.2 4731:::X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4799:::H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2 4799:::H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4799:::H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.6.hr.rep.1 4802:::H37Rv.ctrl.vs.relE2.overexpression.6.hr.rep.2 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.2 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.1 4815:::H37Rv.reaeration.for.12hrs.rep.4 4815:::H37Rv.reaeration.for.12hrs.rep.6 4815:::H37Rv.reaeration.for.1hrs.rep.6 4815:::H37Rv.reaeration.for.6hrs.rep.1 4815:::H37Rv.reaeration.for.6hrs.rep.4 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.1 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.2 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.3 4860:::M..bovis.nadABC.null.nicotinamide.starvation.rep.2 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.2 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.5 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2
RV0961 0.0907968330064648 -0.246448546731833 0.168622689869149 -0.583693926470131 1.12847492450892 2.19209496829893 -0.0907968330064647 -0.324274403594517 -0.324274403594517 -0.402100260457201 0.843113449345744 1.02470711535867 -0.0613173417705994 -2.55488924044165 0.756247215170728 0.919760126558993 0.633612531629529 0.143073797464732 0.51097784808833 -0.83800367086486 -0.429221392394197 NA -0.819024493650151 1.92711645564741 -0.581457551272927 -1.67459774766603 1.04662359229127 0.488424343069259 1.34898151895319 NA 0.633612531629529 1.00151658225313 0.347464936700064 -1.27798249163986 -0.638991245819932 1.34898151895319 1.2424829779832 -0.345676514231755 -0.840155156541022 1.85780788136536 2.04713862086756 2.04713862086756 1.78680885405203 0.0828321985322135 1.07681858091877 0.958486868729898 0.319495622909966 -0.0118331712188876 0.319495622909966 -0.792822471665471 0.272162938034416 -0.0118331712188876 -0.153831225845539 -0.556159047287719 -0.508826362412168 -0.366828307785517 1.47914640236095 -0.0354995136566629 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.539592607581276 0.674490759476595 0.716646431943882 0 0 -1.03983992085975 -0.843113449345744 0.590179414542021 0.674490759476595 -0.8 0.6 0.6 0.45 -0.1 -1.5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2.21280301793199 0.0591658560944382 -1.31348200529653 2.02347227842979 0.854354962003687 -1.87358544299054 NA NA 0 NA NA NA NA NA NA NA NA NA NA NA NA -0.0254524814896828 1.83257866725716 0 0.0763574444690485 -0.674490759476595 NA NA NA NA NA 0 NA
RV1008 NA NA NA NA NA NA NA NA NA NA NA NA -0.337245379738298 -0.65575490504669 -0.430924651887825 -0.505868069607446 1.91105715185035 0.0562075632897163 -0.711962468336406 NA NA -0.44966050631773 -0.0911473999292696 0.710949719448303 -0.578134936694224 -1.23335453161435 0.616677265807173 0.46250794935538 0.732304253146018 -1.04830491533109 0.461493677536618 0.354995136566629 -0.177497568283315 -0.546016329100101 -0.770846582258966 1.70228620248855 -0.256948860752989 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.142498047776746 NA NA NA NA -0.0652732993041867 0.892068423823884 NA NA NA NA NA NA -1.16162297465414 0.0374717088598109 0.44966050631773 3.50735194927829 -0.946160648710224 -0.44966050631773 0.421556724672872 -0.983632357570035 0.955528575925177 0.505868069607446 NA 0.533971851252305 NA 0.927424794280318 -2.22019874994379 NA -0.0281037816448581 NA NA -0.168622689869149 1.03983992085975 2.30451009487837 NA 0.0562075632897163 0.421556724672872 1.09604748414947 0.0281037816448581 0.0843113449345744 NA 1.32087773730833 2.86658572777553 2.22019874994379 0.0281037816448581 -0.0562075632897163 -1.15225504743918 -1.26467017401862 -1.91105715185035 -1.32087773730833 -1.8829533702055 -1.01173613921489 0.843113449345744 -0.702594541121453 -0.421556724672872 0.75880210441117 -0.674490759476595 1.03983992085975 0.871217230990602 -0.730698322766312 2.72606681955124 1.06794370250461 0.815009667700886 2.13588740500922 1.40518908224291 2.36071765816808 NA -1.18035882908404 NA NA NA 3.45676514231755 NA -0.0281037816448581 -0.421556724672872 NA 1.26467017401862 1.15225504743918 1.37708530059805 1.23656639237376 0.730698322766312 1.26467017401862 0.562075632897163 -2.7541706011961 0.196726471514007 0.505868069607446 0.646386977831737 0.562075632897163 0.533971851252305 1.23656639237376 0.337245379738298 NA -2.13588740500922 -0.730698322766312 -0.0843113449345744 0.241936902855735 -0.117302740778538 0 -0.439203285240574 -0.219601642620287 0.0627433264629391 -0.954468055863106 -0.343608500110718 0 0.45 NA -0.575300941906508 0.204992289644848 -1.05141206624293 NA 1.6597762806728 1.73912813472887 NA NA NA NA NA NA NA NA NA 3.80888899469136 0.674490759476595 0 -0.462885815327075 -0.53543529 -0.10447985 -1.3602322875
RV2156C 0.706609367070719 -0.160593037970618 NA 1.86287924045917 0.289067468347112 0.867202405041337 -0.192711645564741 -0.578134936694224 -0.224830253158865 -0.44966050631773 1.25262569617082 NA -1.60958022147824 -1.57892155059294 0.413892056951547 0.137964018983849 0.0153293354426499 -0.0766466772132493 -2.68263370246373 -1.70155623413414 -1.18035882908404 0.935089462001643 -1.28946762841114 1.19027781084105 -0.07935185405607 -1.26962966489712 0.71416668650463 0.991898175700875 1.26962966489712 -0.886192238728373 -0.4 0.1 0 -0.441907738967424 -0.418649436916507 0.814040571782098 0.860557175883932 -0.960918342268026 -0.747804972463182 NA 2.27274060258418 NA NA 1.92083238024856 1.74487826908076 1.30499299116124 1.83285532466466 0.806456342852451 0.982410454020258 0.278594009349028 -0.278594009349029 0.0439885277919519 -0.513199490906105 NA 0.16129126857049 0.571850861295374 -0.366571064932932 -0.835782028047085 -0.944287063267233 0.728450020234723 0.323755564548766 NA -0.134898151895319 -0.458653716444085 0.890327802509105 1.13314447592068 1.96951301767166 -0.458653716444085 -1.96951301767166 0.728450020234723 -0.431674086065021 -0.56657223796034 -0.0809388911371915 -1.05220558478349 -0.458653716444085 0.512612977202212 0.485633346823148 -0.620531498718468 -1.32200188857413 -0.0269796303790638 0.404694455685957 -0.620531498718468 -1.75367597463915 -1.67273708350196 -0.0809388911371915 -0.21583704303251 1.18710373667881 -0.0809388911371915 0.836368541750978 1.16012410629974 -0.188857412653447 3.10265749359234 -0.0539592607581277 0.242816673411574 0.269796303790638 0.512612977202212 0 -0.377714825306893 -0.458653716444085 -0.809388911371914 -0.755429650613786 1.51085930122757 -0.0269796303790638 -1.5648185619857 -0.228136580411201 1.00181715745788 0.674490759476595 NA NA -1.0931401963931 NA 0.069774906152751 0.116291510254585 -0.819024493650151 0.674490759476595 0.481779113911854 0.337245379738298 0.481779113911854 -1.9752943670386 -1.81737787970083 -0.468396360747636 0.693226613906501 2.5875918227193 -0.89932101263546 -0.674490759476595 1.08400300630167 0.0963558227823707 1.01173613921489 0.481779113911854 -1.34898151895319 0.0963558227823707 0.554045980998632 1.68622689869149 -0.9876471835193 -1.42124838603997 -0.578134936694224 0.144533734173556 0.891291360736929 0.770846582258966 0.722668670867781 1.95120541134301 0.650401803781003 -0.578134936694224 1.18035882908404 1.3248925632576 0.0481779113911853 -0.0481779113911854 0.9876471835193 2.67387408221079 2.74614094929757 2.50525139234164 -0.674490759476595 -0.698579715172188 -1.61396003160471 -1.46942629743115 -4.14330037964194 -0.505868069607446 -1.34898151895319 0.385423291129483 0.915380316432522 -0.457690158216261 -0.794935537954559 0.313156424042705 -0.9876471835193 0.26497851265152 1.05991405060608 -2.81840781638434 1.10809196199726 0.505868069607446 1.3248925632576 1.27671465186641 1.61396003160471 0.746757626563373 -0.168622689869149 -0.698579715172188 -0.168622689869149 -0.62631284808541 -2.21618392399453 3.2760979746006 -1.13218091769286 0.192711645564741 0 NA 0.915380316432522 1.18035882908404 0.867202405041337 0.891291360736929 0.26497851265152 0.36133433543389 -0.26497851265152 -1.80667167716945 1.90302749995182 0.385423291129483 0.939469272128115 0.722668670867781 -0.0240889556955927 0.36133433543389 0.144533734173556 0.891291360736929 -1.34898151895319 -1.56578212021352 -0.891291360736929 0.956367494780247 0 -0.201340525216894 0.230746838768309 0.337245379738298 -1.75722592600481 -1.25530224680366 0.468396360747636 0.35 -0.60157283953318 NA -0.550834120239219 -1.31525698097936 -1.00049462655695 4.10315212014929 1.2478079050317 2.43940824677369 -0.159747811454983 0.834238570931578 -0.0887487841416573 -1.04723565287156 0.258554791132695 0.843113449345744 -0.955528575925177 0.843113449345744 -0.348486892396241 NA NA NA NA -0.668857323909204 0.850886407756556 -1.46623506077677
RV2157C 0.505868069607446 -0.24356610758877 -1.21783053794385 2.79164231005591 0.618283196186879 0.693226613906501 -0.693226613906501 -1.10541541136442 -0.65575490504669 -0.131150981009338 -0.0936792721495271 0.0936792721495271 -0.039675927028035 -0.198379635140175 0.674490759476595 -0.277731489196245 0.991898175700875 0.23805556216821 -0.912546321644805 -0.55546297839249 NA 1.15060188381302 -0.674490759476595 1.34898151895319 0.119027781084105 0.15870370811214 0.47611112433642 0.63481483244856 0.7935185405607 -0.627974155374761 0.025 -0.125 0.325 -0.503191518974603 0.0107062025313745 1.0920326582002 1.28474430376494 0 -0.292279329106525 1.82112505058681 0.674490759476595 0.921804037951347 0.51710958226539 1.02297765187284 0.921804037951347 1.19160034174198 1.28153244300553 0.876837987319574 1.51760420882234 -0.955528575925177 -0.292279329106525 -0.370969917712127 -0.168622689869149 -0.685732272134538 -0.0224830253158865 0.348486892396241 1.85484958856064 -1.03421916453078 0.292279329106525 0.0224830253158865 -0.247313278474751 -1.07918521516255 -0.472143531633617 -0.696973784792482 0.809388911371914 -0.0224830253158865 1.14663429111021 -0.944287063267233 -1.61877782274383 0.359728405054184 -0.404694455685957 -1.37146454426908 -0.96677008858312 -1.34898151895319 -0.854354962003687 0.584558658213049 0.0224830253158865 -0.786905886056028 NA NA NA NA -1.5063626961644 -2.06843832906156 -0.696973784792482 -0.112415126579432 0.831871936687801 NA 0.359728405054184 0.179864202527092 NA 5.01371464544269 NA 0.089932101263546 0.202347227842979 0.382211430370071 0.652007734160709 NA 0.269796303790638 -0.786905886056028 -1.3264984936373 3.17010656954 NA -1.12415126579432 -0.288191506321818 0.374035784800657 0.437507519660494 0 -0.05 0 -0.31740741622428 1.38865744598123 0.277731489196245 -0.494626556949503 0.674490759476595 1.25904941768964 0.944287063267233 0.719456810108368 0.224830253158865 -0.694328722990613 -0.376921306766333 0.535625014878473 2.65090554305918 0.0702594541121454 -0.337245379738298 0.573317145555106 -0.876837987319574 0.674490759476595 0.337245379738298 -0.640766221502765 -0.0674490759476595 0.101173613921489 0.404694455685957 -0.539592607581276 -0.573317145555106 -0.741939835424255 -0.404694455685957 2.22581950627276 0.607041683528936 1.11290975313638 0.674490759476595 1.85484958856064 -0.101173613921489 0.370969917712127 0.674490759476595 -0.134898151895319 0.236071765816808 NA 2.19209496829893 1.98974774045596 2.19209496829893 0 -0.0337245379738297 -0.539592607581276 -0.472143531633617 -1.78740051261298 -0.607041683528936 -1.28153244300553 -1.68622689869149 0.640766221502766 -1.65250236071766 -1.21408336705787 1.18035882908404 0.269796303790638 0.303520841764468 0.505868069607447 -3.43990287333064 1.01173613921489 0.539592607581276 0.944287063267233 1.98974774045596 1.18035882908404 0.944287063267233 -0.910562525293404 -0.741939835424255 -1.04546067718872 -0.472143531633617 -1.38270605692702 3.84459732901659 -2.02347227842979 0.607041683528936 -0.236071765816808 1.71995143666532 0.539592607581276 0.0337245379738298 0.708215297450425 1.14663429111021 0.640766221502766 0.438418993659787 0.741939835424255 -2.79913665182787 0.303520841764468 0.708215297450425 0.303520841764468 0.404694455685957 0.607041683528936 0.236071765816808 0.236071765816808 0.708215297450425 -3.00148387967085 -2.36071765816808 0.168622689869149 0.940850167677544 -0.347985678456078 -0.176140898971595 1.48147077527895 0.831068971497948 -2.44502900310266 -0.707127409128689 0.467791978346671 NA NA -0.197411929602906 -0.310479873409861 -0.0963558227823707 -1.05991405060608 1.03850164554333 1.48816215186106 1.05991405060608 -0.634021313907999 0.202347227842979 -0.229326858222042 -1.33549170376366 NA NA NA NA NA NA NA NA NA -1.00628757872655 1.58416889291163 -1.99216344359567
RV2158C 0.0674490759476595 0.0224830253158865 -0.247313278474752 1.55132874679617 0.562075632897163 1.05670218984667 -0.292279329106525 -0.786905886056028 0.472143531633617 0.0674490759476595 0.831871936687801 1.41643059490085 -1.22634683541199 -1.06283392402373 0.940199240482527 1.06283392402373 0.0817564556941327 0.0408782278470664 -1.79864202527092 -1.10371215187079 -1.47161620249439 0.327025822776531 -0.45 -0.3 -1.65 -0.45 -0.05 0 0.1 -0.726642106858806 0.602223892389817 1.08400300630167 0.554045980998632 -0.266659137467491 -1.19212320279584 1.58426899318921 2.5254188901333 -0.9 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.28766417718259 -0.204391139235332 NA NA -1.36942063287672 -1.47161620249439 -0.122634683541199 0.96063835440606 0.776686329094261 -0.89932101263546 -1.59425088603559 1.55337265818852 -0.408782278470664 -0.613173417705996 -0.592734303782463 -0.531416962011863 -0.163512911388266 1.06283392402373 0.265708481005931 0.408782278470664 -2.14610696197098 -1.36942063287672 0.143073797464732 -0.572295189858929 -0.572295189858929 -0.470099620241263 -2.96367151891231 -3.43377113915358 0.756247215170728 0.245269367082398 0.388343164547131 0.51097784808833 0.122634683541199 5.43680430365983 -0.654051645553062 0.51097784808833 0.408782278470664 0.367904050623597 0.367904050623597 -2.98411063283585 0.817564556941327 -0.347464936700064 -0.265708481005931 6.04997772136582 -0.674490759476595 -0.306586708852998 -0.674490759476595 -0.143073797464732 1.74754424046209 0 0 0 -0.2 0.8 0.4 -0.62631284808541 0.62631284808541 0.481779113911854 0.674490759476595 0.722668670867781 -0.433601202520668 -1.51760420882234 -0.404694455685957 1.07918521516255 6.75787857090973 -0.674490759476595 -1.16738785294026 0.0518839045751228 -0.933910282352209 1.45274932810344 1.01173613921489 -0.804200520914402 0.103767809150245 0.466955141176104 0.103767809150245 -0.103767809150245 -1.03767809150245 -0.311303427450736 -0.363187332025859 1.76405275555417 0.882026377777086 0.492897093463666 0.95985223463977 NA -1.6084010418288 0.544780998038788 0.752316616339279 0.0778258568626841 0.0778258568626841 NA 1.76405275555417 2.30883375359296 3.24274403594517 -0.466955141176104 0.0259419522875614 -2.10129813529247 -1.37492347124075 -1.01173613921489 -0.38912928431342 -0.441013188888543 -1.19332980522782 0.856084425489525 -0.95985223463977 -0.415071236600982 0.337245379738298 -0.622606854901472 0.38912928431342 0.882026377777086 -2.02347227842979 1.1414459006527 0.233477570588052 1.24521370980294 2.04941423071735 1.63434299411637 0.856084425489525 -1.01173613921489 -1.16738785294026 NA NA -2.36071765816808 3.34651184509541 -1.24521370980294 0.907968330064647 -0.129709761437807 NA 1.42680737581587 0.596664902613911 1.66028494640393 1.63434299411637 0.38912928431342 1.11550394836514 0.233477570588052 -4.82520312548641 0.441013188888543 0.518839045751227 0.363187332025859 0.674490759476595 0.778258568626841 0.752316616339279 0.207535618300491 NA -0.985794186927331 0.0259419522875614 -0.285361475163175 2.13384349361686 -0.171688556957679 -0.318850177207118 1.50186609110122 0.764422860740141 -2.11340437969333 -1.78313649057031 0.418649436916507 0.55 -0.15 NA -0.509049629793657 -2.16346092662304 0.101809925958731 3.05429777876194 0.636312037242071 3.05429777876194 -0.415071236600982 0.44966050631773 0.138357078866994 -1.69487421612067 0.393452943028014 1.68622689869149 -0.262301962018676 1.08667955693451 -1.18035882908404 NA NA NA NA -1.07360414899621 0.674490759476595 -1.57587128227417
RV2160C 0.974264430355082 0.0499622784797478 NA 1.69871746831143 0.349735949358234 1.44890607591269 -0.174867974679118 -0.424679367077857 -0.0499622784797478 -0.549585063277226 0.0499622784797478 0.0249811392398739 -2.88025783776492 -1.71357111867027 1.09376879915124 0.729179199434157 0.601572839533179 1.05730983917953 -2.69796303790638 -2.97140523769419 NA NA -0.319495622909966 1.13598443701321 -0.551856075935396 -0.183952025311799 0.306586708852998 1.13437082275609 1.19568816452669 -0.90313169489239 0.425994163879955 0.514742948021612 0.674490759476595 -0.840519254116988 -0.217912399215515 0.695244321306644 1.40086542352831 -0.229940031639748 -0.699943240966278 0.419965944579767 0.903563092883741 0.216346092662304 -0.08908368521389 1.13263542629089 0.08908368521389 0.318156018621035 1.00537301884247 0.44541842606945 0.674490759476595 -1.36170775969803 -0.190893611172621 -0.08908368521389 -0.674490759476595 -0.26725105564167 -0.394513463090084 0.649038277986912 0.674490759476595 -0.674490759476595 -0.705149430361895 -0.275928037967698 0.245269367082398 NA -1.24167617085464 -0.919760126558994 0.0306586708852998 0 0.582514746820696 -0.245269367082398 NA 0.628502753148646 0.582514746820696 -0.720478765804545 -0.398562721508897 -1.16502949364139 -0.919760126558994 -0.153293354426499 0.291257373410348 -0.275928037967698 -1.83952025311799 -1.73221490501944 0.321916044295648 -0.628502753148646 -1.34898151895319 -1.30299351262524 -2.46802300626663 -2.37604699361073 0.475209398722147 0.643832088591295 0.0919760126558993 0.459880063279497 -0.705149430361895 3.54107648725213 -0.475209398722147 0.475209398722147 0.475209398722147 0.199281360754449 0.383233386066247 -0.705149430361895 0.689820094919245 -0.367904050623597 -0.490538734164797 3.95496854420367 -1.36431085439584 0.643832088591295 -1.2063007813716 0 0.674490759476595 0 -0.674490759476595 -0.638991245819933 -0.946653697511011 0.733656615571034 0.496993191193281 -0.776300685435327 0.470870907559132 1.03082550033215 0.776300685435326 0 -0.165441129682938 -0.936792721495271 -0.0749434177196216 0.337245379738298 3.16853798637842 -0.197695567432795 NA NA -0.87287039461677 1.88460653383166 0.119027781084105 NA -0.0198379635140175 -0.0198379635140175 0.972060212186858 -0.39675927028035 NA -0.15870370811214 NA 2.89634267304656 0.614976868934543 0.039675927028035 NA NA -0.813356504074718 0.218217598654193 0.614976868934543 0.416597233794368 0.039675927028035 NA 1.50768522706533 0.595138905420525 2.16233802302791 -0.218217598654193 -0.277731489196245 -1.22995373786909 -1.05141206624293 -1.86476857031765 -0.614976868934543 -0.912546321644805 -1.4680093000373 0.277731489196245 -0.436435197308385 -0.0595138905420525 0.15870370811214 -1.03157410272891 0.39675927028035 0.535625014878473 -1.64655097166345 0.654652795962578 0.138865744598123 2.12266209599987 2.18217598654193 1.68622689869149 1.52752319057935 NA NA NA NA NA NA NA 0.07935185405607 -0.892708358130788 NA 0.39675927028035 0.932384285158823 0.991898175700875 0.991898175700875 0.773680577046683 1.4680093000373 0.297569452710263 -0.892708358130788 0.892708358130788 0.614976868934543 0.575300941906508 0.0991898175700875 0.39675927028035 0.753842613532665 0.277731489196245 NA -1.28946762841114 -0.87287039461677 -0.218217598654193 2.29804373803973 -0.411857189414912 -1.10425478321389 0.912260883320863 0.669638307969569 -1.50425996717802 0.402820870242967 1.26467017401862 NA -0.268419792036604 NA -0.828321985322134 -1.13598443701321 -0.662657588257708 2.76896206521971 0.118331712188876 0.828321985322134 0.454889116856309 0.203915811004552 -0.737234085939534 -3.43519712384592 NA NA NA NA NA NA NA NA NA -1.3208116796489 0.76166489716678 -0.756358319572362
RV2377C NA NA NA NA NA NA NA NA NA NA NA NA -1.49560994492636 -0.909096241033672 2.22875207479223 0.586513703892691 1.524935630121 0.909096241033672 -1.40763288934246 NA -1.11437603739611 0.439885277919519 -0.894997353920867 0.739345640195499 -0.889438364144961 -0.622606854901473 -0.296479454714987 0.370599318393734 0.0296479454714987 -0.427177481001843 0 NA 0.613173417705996 -0.615839389087326 -1.08505035220148 0.205279796362442 1.6129126857049 0.112415126579433 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.0224830253158865 0.719456810108368 0.494626556949503 -0.224830253158865 0.269796303790638 -0.382211430370071 0.89932101263546 1.30401546832142 NA -1.52884572148028 -1.12415126579433 3.23755564548766 -0.112415126579433 -0.921804037951347 -1.03421916453078 -0.202347227842979 -0.44966050631773 0.674490759476595 -0.0674490759476595 -0.989253113899006 -0.337245379738298 -0.427177481001844 0.359728405054184 0 0.404694455685957 0.539592607581276 -2.94527631638113 -2.20333648095688 0.786905886056028 0.51710958226539 0.292279329106525 -0.314762354422411 -0.359728405054184 6.87980574666127 -0.472143531633617 0.539592607581276 0.96677008858312 0.134898151895319 0 -1.30401546832142 1.05670218984667 -0.876837987319574 -1.14663429111021 2.15837043032511 -0.404694455685957 -1.95602320248213 -0.730182657048057 0.940574270095803 0.548023742074734 NA NA NA NA NA NA NA NA NA NA NA NA -0.817745434055695 -0.674490759476595 0.280540404384071 7.40690778462261 -0.184476105155992 NA NA NA 1.04437278886699 0.435155328694578 NA 0.478670861564035 NA NA NA NA 0.326366496520933 -0.326366496520933 NA 0.543944160868222 0.935583956693342 NA NA NA NA NA 0.935583956693342 0.0652732993041866 NA 1.82765238051723 2.21929217634235 NA -1.19667715391009 -0.130546598608373 -0.478670861564035 0.217577664347289 -2.69796303790638 -0.0217577664347289 -2.04523004486451 -0.304608730086204 0.152304365043102 -0.78327959165024 -0.674490759476595 0.39163979582512 0.108788832173644 0.348124262955662 0.130546598608373 -1.19667715391009 1.54480141686575 0.326366496520933 NA -0.108788832173644 2.24104994277707 0.652732993041866 NA NA NA NA 0.0435155328694578 NA NA 0.108788832173644 0.130546598608373 NA 0.652732993041866 0.718006292346053 0.130546598608373 0.739764058780782 0.326366496520933 0 -0.217577664347289 -0.369882029390391 0.78327959165024 0.217577664347289 -0.152304365043102 0.0217577664347289 0.413397562259849 -0.0652732993041866 -0.152304365043102 NA -0.543944160868222 -0.282850963651475 -0.413397562259849 0.886192238728373 -0.359400185706507 0.359400185706507 0.51097784808833 0.347464936700064 0.265708481005931 -0.442634560906516 0.210778362336436 0.0532492704849944 -0.878110611394058 NA NA NA NA NA NA NA -0.963558227823707 2.00970716088945 -0.468013996371515 -0.550604701613547 NA 0.587675117167727 -0.988362697054813 NA NA 4.24197802947931 0.503836470934324 -0.390066945239477 -1.10518967817852 NA NA 0.598635151566703
[+] Show/hide bicluster #94 motif PSSM #1. bicluster 94 motif PSSM #1 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 0 1 0 0
2 0.75 0.25 0 0
3 0 0 0 1
4 0 0 0 1
5 0 0 0 1
6 0 1 0 0
7 0 0 1 0
8 0.75 0 0.25 0 [+] Show/hide bicluster #94 motif PSSM #2. bicluster 94 motif PSSM #2 Mycobacterium tuberculosis H37Rv 10x4
POSITION A C G T
1 0.75 0.25 0 0
2 0.5 0 0 0.5
3 1 0 0 0
4 0.5 0 0 0.5
5 0 1 0 0
6 0.5 0.5 0 0
7 0 1 0 0
8 0.75 0 0.25 0
9 1 0 0 0
10 0 1 0 0 |