|
[+] Show/hide bicluster #110 rows and columns.
bicluster 110
Mycobacterium tuberculosis H37Rv
6x236
[+] Show/hide bicluster #110 rows (genes).
bicluster 110 genes
Mycobacterium tuberculosis H37Rv
6
[+] Show/hide bicluster #110 rows (short gene names).
bicluster 110 short names
Mycobacterium tuberculosis H37Rv
6
short_name
[+] Show/hide bicluster #110 rows (long gene names).
bicluster 110 long names
Mycobacterium tuberculosis H37Rv
6
long_name
[+] Show/hide bicluster #110 rows (NCBI RefSeq gene IDs).
bicluster 110 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
10
[+] Show/hide bicluster #110 gene upstream sequences.
bicluster 110 upstream sequences
Mycobacterium tuberculosis H37Rv
6
upstream
[+] Show/hide bicluster #110 columns (arrays; conditions).
bicluster 110 arrays
Mycobacterium tuberculosis H37Rv
236
[+] Show/hide bicluster #110 ratios.
bicluster 110 ratios
Mycobacterium tuberculosis H37Rv
6x236
GENES 2867:::H37Ra..7H9.roll.replicate.4 2867:::H37Ra..Sauton.s.media.replicate.1 2867:::H37Ra..Youman.media.replicate.1 2867:::H37Ra..Youman.media.replicate.4 2867:::H37Rv..7H9.shake.replicate.3 2867:::H37Rv..Sauton.s.media.replicate.2 2885:::H37Rv..7H9.roll.replicate.3 2885:::Strain.1254...replicate.1 2885:::Strain.1254...replicate.2 2885:::Strain.1254...replicate.3 2885:::Strain.1843...replicate.3 2885:::Strain.1843..replicate.1 2885:::Strain.1843..replicate.4 2885:::Strain.3160..replicate.4 2885:::Strain.9700665..replicate.1 2885:::Strain.9800608..replicate.2 2885:::Strain.9800608..replicate.4 2885:::Strain.CDC1551..replicate.2 2885:::Strain.H37Ra..replicate.4 2885:::Strain.M3061a..replicate.2 4055:::H37Rv.Vs.M.bovis.rep4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.3 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.5 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration.rep3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3 4062:::MTB1254.Day.0.rep.2 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.3 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.4 4082:::H37Rv.wild.type.Vs.Rv3676.null.2 4082:::Rv3676.null.Vs.H37Rv.wild.type.2 4084:::High.iron.wt.vs.high.iron.ideR.Complement.2a 4084:::High.iron.wt.vs.high.iron.ideR.KO.1b 4084:::High.iron.wt.vs.low.iron.wt.1b 4084:::High.iron.wt.vs.low.iron.wt.3b 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.2 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.1 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.vs..MTB1254.rep1 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.4 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.6 4099:::H37Rv.hypoxia.2hr.rep.4 4099:::H37Rv.hypoxia.2hr.rep.6 4100:::H37Rv.0.2..Oxygen..2h..1 4100:::H37Rv.0.2..Oxygen..2h..5 4101:::H37Rv.Day.0.rep.1 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2 4101:::H37Rv.Day14.3 4101:::H37Rv.Day8.3 4101:::NRP.Day14..1 4101:::NRP.Day14..7 4101:::NRP.Day6..2 4107:::DIPED.50ug.mL.vs.DMSO.12h.1 4107:::Dubos.NRP.1vsDubos.log.phase 4107:::pH4.8vspH6.8..4h. 4107:::pH4.8vspH6.8..4h.A 4107:::pH4.8vspH6.8..4h.C 4107:::pH4.8vspH6.8..6h. 4107:::pH5.2vspH6.8..16h. 4107:::pH5.6vspH6.8..16h. 4107:::Succinate.7H9.based.medium..2 4107:::X0.05mM.palmitatevs10mM.gluc 4107:::X0.12mg.mL.BZAvspH5.6..7h. 4107:::X0.12mg.mL.Nam.pH5.6..2h..1 4107:::X0.12mg.mL.Nam.pH5.6..2h..2 4107:::X0.12mg.mL.Nam.pH5.6..4h..2 4107:::X0.12mg.mL.NamvspH5.6..5.5h. 4107:::X0.12mg.mL.PZA.pH5.6..4h..1 4107:::X0.12mg.mL.PZAvspH5.6..11h. 4107:::X0.12mg.mL.PZAvspH5.6..4h. 4107:::X0.12mg.mL.PZAvspH5.6..4h.A 4107:::X0.12mg.mL.PZAvspH5.6..5.5h. 4107:::X0.1mMGSNO.5ug.mLKCNvsDMSO.6h 4107:::X0.2mM.NaN3.DMSO 4107:::X0.2ug.mL.Mtmvsctrl..4h.B 4107:::X0.5mM.DNP.DMSO..6h 4107:::X1.2mg.mL.PZA.pH5.6..2h.. 4107:::X1.2mg.mL.PZAvspH5.6..4h. 4107:::X1.2mg.mL.PZAvspH5.6..4h.A 4107:::X100uM.DCCD.DMSO..6h 4107:::X100uM.Dipyridylvsctrl..6h 4107:::X100uM.DipyridylvsCtrl..6hA 4107:::X10ug.mL..59.DMSO..6h 4107:::X130ug.mL.TLMvsDMSO..6h 4107:::X130ug.mL.TLMvsDMSO..6hA 4107:::X200uM.Dipyridylvsctrl..6h 4107:::X20ug.mL.Cephalexin.Ctrl..6h..2 4107:::X20ug.mL.ethambutol.DMSO 4107:::X20ug.mL.Procept6776vsDMSO..6h 4107:::X25J.UVvs.ctrl..6h. 4107:::X2ug.mL..111895vsDMSO..6h 4107:::X40ug.mL.5CL.pH5.6..2h..1 4107:::X40ug.mL.5CL.pH5.6..4h..1 4107:::X40ug.mL.5CL.pH5.6..4h..2 4107:::X40ug.mLProcept6778vsDMSO.6hA 4107:::X50uM.NigericinvsDMSO..6h 4107:::X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2 4107:::X7d.Dubos.NRP.1vsDubos.log.phase 4107:::X7d.Dubos.NRP.1vsDubos.log.phase.A 4107:::X80ug.mL.5CL.pH5.6..2h. 4107:::X9ug.mLAscidideminNpvsDMSO.6h 4363:::H37Rv.hypoxia.1.day.rep.10 4363:::H37Rv.hypoxia.1.day.rep.6 4363:::H37Rv.hypoxia.1.day.rep.9 4363:::H37Rv.hypoxia.12hr.rep.3 4363:::H37Rv.hypoxia.8hr.rep.2 4364:::H37dosR.mutant.hypoxia.1.day.rep.5 4364:::H37dosR.mutant.hypoxia.12hr.rep.3 4364:::H37dosR.mutant.hypoxia.4hr.rep.2 4364:::H37dosR.mutant.hypoxia.7.day.rep.1 4365:::H37Rv.diamide.1h.rep.2 4365:::H37Rv.diamide.1h.rep.4 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.2 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4396:::Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.4 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.4 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.2 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep4 4575:::Whole.Lung.Surfactant.2hrs.rep.2 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep.1 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4583:::X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4583:::X5ug.ml.KCN.vs.DMSO.6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2hrs..DS..rep.1 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages.rep.2 4615:::AA_30uM_1h_04 4615:::AA_3uM_10.min_01 4615:::AA_60uM_2h_T0_01 4615:::Acetate.3mM.10m.01 4615:::CK.for.AA.NA.24h 4615:::CK.PA.Na.4h.2 4615:::ETYA_30uM_10min.03 4615:::L2A_30uM_10min_02 4615:::L2A_30uM_1h_02 4615:::MTB1248_PA50_1h_01 4615:::MTB1254_Bottom_10D_04 4615:::MTB1254_Bottom_14D_03 4615:::MTB1254.0485.1._AA_10m_01 4615:::MTB1254.0485.1._OA_10m_02 4615:::MTB1254.B4.1.Compl._PA_30MIN_03 4615:::MTB1254.B4.1.Compl._PA_4h_03 4615:::MTB1254.B4.1.Compl._PA_4h_04 4615:::MTB1254.B4.1.Compl._PA_4h_05 4615:::OA_50uM_10min_02 4615:::OA_50uM_1h_08 4615:::PA_100uM_2h_03 4615:::PA_50uM_10min_06 4615:::PA_50uM_12h_06 4615:::PA_50uM_1h_04 4615:::PA_50uM_24h_09 4615:::PA_50uM_30.min_05 4615:::PA_50uM_4h_07 4615:::PA_50uM_8h_03 4615:::PA_50uM.AA_30uM_2h_03 4615:::PA_5uM_10.min_01 4615:::Spe_100uM_30M_01 4615:::Starvation_OA50_6h_01 4615:::Starvation_OA50_6h_02 4615:::TBE734 4615:::Tet_100uM_30M_01 4615:::Tet_20uM_30M_01 4615:::Tet_5ug_30M_01 4615:::X2.2..Dipyridyl_0.2mM.Dpd.AA_50uM_01 4615:::X7H9_MTB1254_OA100_10M_01 4615:::X7H9_MTB1254.3524.1._OA50_10M_01 4699:::CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3 4703:::CDC1551.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2 4731:::X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4731:::X5ug.ml.Streptomycin.vs.Ethanol.6hrs 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.3 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4799:::H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.1 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4815:::H37Rv.reaeration.for.12hrs.rep.4 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.1 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.2 Raghavan_Nature2008:::WT.rep2 Rohde_CellHostMicrobe2007:::M..bovis.ctrl..vs.2.hr.after.macrophage.infection Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages...IFNg.for.24hrs
RV1789 0.850444870644402 0.410559592724884 -0.850444870644403 1.05572466700684 -0.0293256851946346 0.0293256851946346 1.13820315661675 0.337245379738298 0.674490759476595 -0.0843113449345744 -0.674490759476595 -0.843113449345744 NA 0.0843113449345744 NA 0.126467017401862 0.337245379738298 -0.463712397140159 0.505868069607446 0.548023742074734 0.325 0.692720239462449 -1.64065319872685 0.168622689869149 -0.805641740485933 -0.993000284784987 0.0562075632897163 -1.06794370250461 -0.843113449345744 1.10541541136442 1.77990617084102 -0.430924651887825 -0.318509525308392 -1.51760420882234 0.24356610758877 -1.77990617084102 0.505868069607446 -0.131150981009338 -1.23094563604479 -0.65762849048968 1.05 -1.05 -0.1 -0.65 0 0.55 -1.34898151895319 -1.68622689869149 -0.275928037967698 0.0613173417705996 0.122634683541199 -0.735808101247195 -1.13437082275609 -0.0613173417705996 0.0919760126558994 0.214610696197098 -0.0613173417705996 0.674490759476595 0.367904050623597 1.31832284806789 NA -1.41029886072379 -0.551856075935396 0.275928037967698 -0.490538734164796 -0.183952025311799 -0.398562721508897 1.19568816452669 0.0613173417705996 0.521197405050096 0.827784113903094 -0.643832088591295 1.59425088603559 0.0306586708852998 0.521197405050096 0.406319734624455 NA 0.942661784328735 0.211286262004716 1.01173613921489 -0.385423291129483 0.473150234259701 0.573820496868148 0.0906032363476023 0.805362100867576 -0.865764258432644 -1.59059014921346 0.110737288869292 -0.255841322560088 0.325616228712839 -0.325616228712839 -3.44222870353573 -0.325616228712839 -1.51178963330961 -0.907073779985766 -0.883815477934849 1.06988189434219 0.16280811435642 -0.837298873833015 -0.465166041018342 -1.72111435176786 -2.39560511124446 0.209324718458254 -2.37234680919354 -0.023258302050917 -1.00010698818943 -1.58156453946236 -0.023258302050917 -0.209324718458254 0.325616228712839 -2.06998888253162 1.93043907022612 -1.04662359229127 -0.232583020509171 -0.581457551272927 NA -0.651232457425678 -0.9535903840876 0.534940947171093 -0.209324718458254 -0.16280811435642 0.790782269731181 0.279099624611005 0.55819924922201 1.46527302920778 -0.232583020509171 0.441907738967424 -1.51178963330961 -1.86066416407337 -1.95369737227703 1.88392246612428 0.139549812305502 0.0697749061527512 0.325616228712839 -0.465166041018342 NA -0.0465166041018341 2.24397887287406 -1.10253297222136 0.37615830816964 2.86658572777553 0.661519783332815 0.674490759476595 2.96775934169702 -0.505868069607447 -2.69796303790638 0.674490759476595 1.25904941768964 0 -0.674490759476595 -0.63481483244856 -0.6 0.45 -1.4 0.6 -0.15 0.674490759476595 -0.840155156541022 0.75 -0.2 0.535310126568726 -0.68519696200797 -0.620959746819723 0.68519696200797 -0.125904941768964 -0.611538288592113 -0.161877782274383 -0.593551868339404 1.13314447592068 -0.701470389855659 -0.432365871459356 -0.501544410892853 0.294008792592362 -0.536133680609601 -1.15874053551107 -1.98888300871304 -0.32859806230911 -0.709080029193344 -0.363187332025859 1.19332980522782 -0.847437108060337 0.363187332025859 -0.32859806230911 -0.397776601742607 1.22791907494457 1.81593666012929 1.26250834466132 1.6775795812623 -0.224830253158865 -0.916615647493835 0.674490759476595 1.53922250239531 -0.155651713725368 0.501544410892853 0.743669298910092 -0.259419522875614 4.13341773115144 0.743669298910092 0.536133680609601 0.155651713725368 0.259419522875614 0.0518839045751227 0.0172946348583742 -0.155651713725368 0.328598062309111 1.6775795812623 0.328598062309111 0.57072295032635 -1.29709761437807 -0.985794186927331 -0.584558658213049 0.404694455685957 0.989253113899006 0.489336433345765 -0.171929017121485 0.700941377495285 -1.07125002975695 -2.38320068348397 -0.330632725233625 -1.09770064777564 -0.674490759476595 -1.13598443701321 0.212997081939977 -1.34898151895319 NA -0.564119544289516 1.22634683541199 -0.515065670873036 0.656741002648264 0.464218213364531 0 -0.9928051 -0.36240517 -0.349148157846708 1.06475 0
RV2115C -0.337245379738298 0.944287063267233 -0.843113449345744 2.02347227842979 -0.978011601241063 0.674490759476595 0.707392747743746 0.148058947202179 0.444176841606538 1.03641263041526 -0.0822549706678775 -0.345470876805085 0.83900070081235 1.29962853655246 -0.115156958935029 0.773196724278048 1.03641263041526 NA 1.26672654828531 1.66155040749112 -0.526431812274416 1.58317969932701 -0.459028433532683 -1.85484958856064 -0.548023742074734 0.0632335087009308 0.358323215971941 -0.274011871037367 -0.379401052205585 1.22251450155133 1.55975988128963 -0.274011871037367 0.695568595710239 -0.906346958046675 -0.695568595710239 -0.779879940644813 -0.0210778362336436 0.590179414542021 -0.787764016793275 -0.705383466017508 NA NA -0.125 -0.275 -0.775 0.525 -0.103767809150245 0.103767809150245 -0.103767809150245 -0.129709761437807 -0.103767809150245 -0.804200520914402 0.077825856862684 -0.856084425489525 0.285361475163175 -1.08956199607758 -0.674490759476595 1.37492347124075 1.1414459006527 1.37492347124075 0.804200520914402 -0.648548807189034 1.73811080326661 1.45274932810344 -0.95985223463977 -0.700432711764157 -0.311303427450736 1.06362004379002 1.34898151895319 1.06362004379002 1.66028494640393 -0.95985223463977 1.45274932810344 1.01173613921489 -0.985794186927331 0.864488156512256 -0.0854988286660474 1.13048451236218 0.256496485998142 0.47611112433642 -0.55546297839249 0.628292762252171 1.51529430896112 -1.29354392228388 -1.18266872894526 -0.591334364472631 -0.70220955781125 1.33050232006342 0.0627433264629391 1.36466735056893 0.109800821310143 -0.298030800698961 0.109800821310143 -0.250973305851756 -0.0313716632314696 -0.972521560175556 NA -1.01957905502276 -0.7215482543238 -0.235287474236022 -0.345088295546165 -0.799977412402473 -1.09800821310143 -0.894092402096882 -0.454889116856309 -0.517632443319248 -0.611747433013656 -0.847034907249678 0.580375769782187 0 -1.33329568733746 1.06663654986996 -0.564689938166452 -0.894092402096882 -0.956835728559821 2.46267556367036 -0.282344969083226 -0.235287474236022 3.02736550183681 0.266659137467491 0.266659137467491 0.298030800698961 0.235287474236022 0.454889116856308 0.0941149896944086 -0.533318274934982 1.36466735056893 -0.752919917555269 -1.30192402410599 -0.941149896944086 0.172544147773083 0.376459958777634 2.30581724751301 0.878406570481147 1.34898151895319 -0.298030800698961 1.4901540034948 0.143992409326464 -0.742697690210184 0.87911155167736 NA 0.84879736024021 1.25262569617082 NA -0.0137651175403387 -2.38136533447859 0 0.936792721495271 -0.749434177196217 -0.355981234168202 -1.0304719936448 -0.7 0.5 0 0.85 0.333368996063145 -0.0481779113911852 -0.722668670867781 0.0219346588447673 -0.0219346588447673 -0.0843113449345743 -0.62390395251585 -0.118035882908404 -0.522730338594361 0.999691661367097 0.0361334335433891 -0.650401803781003 0 0.26497851265152 -0.469734636064057 -1.22853674047523 -0.722668670867781 NA -0.698579715172188 0.337245379738298 NA -0.144533734173556 -0.36133433543389 -1.51760420882234 0.144533734173556 -0.0240889556955927 0.650401803781003 -0.481779113911854 -0.794935537954559 1.25262569617082 0.216800601260334 -0.168622689869149 0.674490759476595 -1.10809196199726 -1.44533734173556 NA 0.216800601260334 -0.168622689869149 0.433601202520668 0.554045980998632 -0.433601202520668 3.42063170877416 -0.144533734173556 0.26497851265152 -0.674490759476595 1.37307047464878 -0.578134936694224 -1.30080360756201 -0.698579715172188 2.33662870247249 2.26436183538571 0.770846582258966 -0.144533734173556 -1.15626987338845 -0.26497851265152 -0.45 1.65 1.05 0.936792721495271 -0.0562075632897162 0.824377594915839 -1.70496275312139 -2.85925430647687 -0.306586708852998 -0.981077468329593 -2.7849941036453 -1.74062131477831 0.261093197216747 NA NA -0.522730338594361 NA NA 0.294008792592362 -0.12614545 0 -0.981330686355458 -0.572947341527211 -0.893075727825492 -0.1045 0.224830253158865
RV2116 2.35 1.7 -0.8 -0.45 -0.55 0.35 -0.55 -0.1 0.5 0.8 -0.75 -0.05 0.9 0.15 -0.05 0.15 -0.25 0.25 0.95 2.15 -1.68622689869149 1.55 -0.1 -1.1480693778325 -0.717543361145314 -0.229613875566501 0.688841626699501 -0.229613875566501 -0.315719078903938 1.69340233230294 0.832350298928564 0.373122547795563 0.803648564482752 -0.258315610012313 -1.89431447342363 -1.09066590894088 0.459227751133001 0.574034688916251 NA NA NA NA 0.25 0.05 -0.85 -0.1 -0.277731489196245 -0.119027781084105 -1.70606486220551 -0.47611112433642 -0.39675927028035 -0.912546321644805 0.0396759270280349 -0.87287039461677 -0.515787051364455 -0.55546297839249 -0.39675927028035 0.71416668650463 0.71416668650463 1.19027781084105 0.07935185405607 -0.39675927028035 1.74574078923354 -0.0793518540560701 -0.47611112433642 -0.31740741622428 -0.63481483244856 1.54736115409337 0.436435197308385 0.277731489196245 1.15060188381302 -1.15060188381302 0.87287039461677 0.753842613532665 -1.66638893517747 0.3 0.55 0.85 0.5 0.6 -1.05 0.0160593037970618 0.112415126579432 -0.947498924026645 -1.20444778477963 -0.144533734173556 0.0160593037970618 0.819024493650151 -0.149886835439243 1.40893625312889 -2.18834779741295 -3.53732931636614 -2.18834779741295 -1.70870992400737 -0.359728405054184 0.0599547341756973 0.119909468351395 0 -1.64875518983168 -2.1583704303251 -1.43891362021674 -2.63800830373068 -0.869343645547612 -0.599547341756974 -1.55882308856813 -0.989253113899006 -1.70870992400737 -0.0599547341756974 0.659502075932671 1.61877782274383 -0.239818936702789 NA -1.37895888604104 -1.40893625312889 -2.06843832906156 NA -0.0599547341756974 0.089932101263546 -0.0599547341756974 0.539592607581276 0.569569974669125 NA -0.0599547341756974 0.0599547341756973 1.37895888604104 0.389705772142033 0.0299773670878487 -1.2290720506018 -0.809388911371914 -0.989253113899006 1.64875518983168 0.509615240493427 0.839366278459763 1.1691173164261 2.2183251645008 -1.37895888604104 0.599547341756974 NA NA NA NA NA 1.81593666012929 2.55960595903939 0.138357078866994 -0.743669298910092 NA NA NA -0.121783053794385 -0.627651123401832 0.192711645564741 0.23125397467769 -0.886473569597811 -0.501050278468328 -1.00151658225313 -0.172946348583742 -0.588017585184724 -0.836368541750978 0.512612977202212 -0.141998054626652 -0.24849659559664 -0.922987355073235 1.31348200529653 NA NA NA NA NA NA -0.843113449345744 -0.607041683528936 NA -0.134898151895319 -0.674490759476595 NA -0.202347227842979 -1.55132874679617 -0.0337245379738297 -0.404694455685957 0.0337245379738297 0.337245379738298 -0.775664373398084 -0.708215297450425 0.910562525293403 0.843113449345744 0.269796303790638 0.708215297450425 -0.944287063267233 NA NA 1.48387967084851 1.01173613921489 0.910562525293403 1.48387967084851 -0.0337245379738297 5.09240523404829 1.18035882908404 0.168622689869149 -0.337245379738298 1.01173613921489 -0.236071765816808 -0.303520841764468 -1.31525698097936 3.64225010117361 3.06893295561851 0.843113449345744 0.202347227842979 -0.539592607581276 -0.337245379738298 -1.300803607562 0.722668670867781 0.658431455679533 0.81996915857939 -0.55546297839249 0 -0.95222224867284 -2.27124439415588 -0.674490759476595 NA -0.0793518540560701 -0.95222224867284 NA -0.692720239462449 1.13022775912294 -0.257893525682228 2.61861118385031 NA NA 0.446477073715272 0 NA NA 0.0950000000000001 0.819659761728895 0.337245379738297
RV2117 NA NA NA NA NA NA 0.15870370811214 0.932384285158823 0.515787051364455 0.753842613532665 -0.55546297839249 0.357083343252315 0.773680577046683 0.87287039461677 -0.63481483244856 0.63481483244856 NA -0.07935185405607 0 2.02347227842979 -0.778989327846208 0.39675927028035 -2.69796303790638 -2.23425064076622 -0.463712397140159 -1.09604748414947 -0.0421556724672872 -0.505868069607446 -0.379401052205585 -0.337245379738298 -1.01173613921489 -0.337245379738298 0.168622689869149 0.379401052205585 0.505868069607446 -0.126467017401862 1.01173613921489 1.43329286388776 NA NA NA NA 0.887487841416573 -0.674490759476595 -0.532492704849944 0 -0.764422860740141 -0.494626556949503 -0.824377594915839 -0.5545812911252 -0.914309696179385 -0.254807620246714 -0.254807620246714 -1.15412863288217 1.33399283540927 -0.464649189861654 -0.0749434177196217 0.524603924037352 0.974264430355082 1.03421916453078 0.974264430355082 -0.314762354422411 0.884332329091536 0.10492078480747 -0.974264430355082 -0.494626556949503 0.134898151895319 0.734445493652293 0.704468126564444 0.0449660506317731 1.00424179744293 -1.30401546832142 0.524603924037352 0.824377594915839 -2.53308751892321 0.0449660506317731 -0.0449660506317731 0.884332329091536 0.314762354422411 0 0 0.52307446653287 0.605665171774902 -2.56031186250299 -1.54169316451793 -0.247772115726096 -0.825907052420321 -0.110120940322709 -0.770846582258966 0.481779113911854 -2.1840653164004 -2.82643746828288 -2.1840653164004 -0.80296518985309 -1.47745594932968 -0.89932101263546 1.44533734173556 -0.0321186075941235 -0.481779113911854 -1.70228620248855 -2.21618392399453 -2.858556075877 0 -0.610253544288348 -0.417541898723607 -1.44533734173556 -2.24830253158865 0.0321186075941236 0.89932101263546 1.57381177211206 -2.08770949361803 0.931439620229584 -0.706609367070719 -0.128474430376494 -1.38110012654731 1.7665234176768 -0.931439620229584 -0.89932101263546 0.578134936694224 0.385423291129483 0.706609367070719 1.28474430376494 0.706609367070719 0.963558227823707 0.224830253158865 -0.610253544288348 0.706609367070719 -0.738727974664842 -1.50957455692381 -1.25262569617082 0.867202405041337 0.289067468347112 0 0.963558227823707 1.18838848098257 -1.2205070885767 -0.481779113911854 1.07731162971956 -1.53634006325224 -0.0187358544299054 0.983632357570035 0.309141598093439 1.86476857031765 2.53925932979424 -0.257893525682228 -2.59877322033629 -0.107918521516255 0.728450020234723 -0.944287063267233 NA NA -0.45 0 -1.65 0.35 -1.10809196199726 -0.0529012360373801 -0.92577163065415 -0.568391089446569 0.568391089446569 1.09845637971903 -1.25262569617082 -0.674490759476595 3.02557283536644 0.0333906316572572 -1.04846583403788 -0.0333906316572572 -0.260446926926606 0.901547054745944 -0.701203264802401 -0.374717088598108 -0.637019050616784 1.23656639237376 0.187358544299054 -0.89932101263546 -0.749434177196217 0.112415126579433 -1.12415126579433 -0.674490759476595 0.524603924037352 -1.12415126579433 -0.299773670878487 -0.562075632897163 -0.637019050616784 0.89932101263546 1.386453227813 1.01173613921489 1.91105715185035 -0.299773670878487 -0.374717088598108 0.374717088598108 1.34898151895319 1.64875518983168 0.0374717088598108 1.42392493667281 -0.112415126579433 NA 1.7236986075513 0.112415126579433 -0.562075632897163 0 0.187358544299054 0.0749434177196217 -0.637019050616784 0.861849303775649 0.786905886056028 0.149886835439243 0.861849303775649 -0.674490759476595 -1.46139664553262 -0.141172484541613 1.36466735056893 0.956835728559821 0.751575417702492 -0.55886377213775 0.520321443024802 -2.33181091133337 -0.930797248077701 -0.674490759476595 NA NA NA NA NA NA -0.424679367077856 0.674490759476595 NA 0.728450020234723 0.43074645 NA 0.0392675029004818 -1.95401004943769 NA 0.568859541097778 0.249999999999999
RV2130C 1.52884572148028 0.224830253158865 0.854354962003687 1.1691173164261 -0.134898151895319 0.674490759476595 1.16162297465414 0.824377594915839 0.412188797457919 1.64875518983168 -0.637019050616784 -0.674490759476595 0.861849303775649 0.112415126579433 -1.49886835439243 1.01173613921489 0.0374717088598108 -0.44966050631773 1.386453227813 1.46139664553262 -1.15 0.674490759476595 -1.75367597463915 -2 0.6 -0.75 0.25 -0.6 -0.05 0.9 2 0 0.8 -0.6 -0.2 -0.55 0.35 1 -1.14874207473358 NA NA NA 0.75 -0.25 -0.45 0.2 -0.733142129865864 -1.75954111167807 -2.19942638959759 -0.821119185449768 -0.175954111167807 -0.439885277919519 -0.410559592724884 0.0586513703892692 0.0879770555839037 -0.967747611422941 -0.615839389087326 0.909096241033672 1.29033014856392 0.615839389087326 0.410559592724884 -2.31672913037613 1.49560994492636 0.498536648308788 -1.08505035220148 -0.997073296617575 -1.02639898181221 0.263931166751711 NA 1.64223837089954 1.08505035220148 -0.351908222335615 1.34898151895319 0.967747611422941 -1.87684385245661 0.300676603622097 1.16207444102594 -0.739501917016508 0.788260285171443 0.35 -0.6 1.1691173164261 1.79864202527092 -1.61877782274383 -2.24830253158865 -0.989253113899006 -0.404694455685957 0.269796303790638 -0.89932101263546 2.21618392399453 -1.7665234176768 -3.43669101257122 -1.7665234176768 -1.28474430376494 -0.578134936694224 -0.513897721505977 0.481779113911854 NA -0.513897721505977 -1.67016759489443 -3.01914911384762 -2.98703050625349 -0.44966050631773 -2.66584443031226 -0.867202405041337 -0.963558227823707 -1.67016759489443 -0.224830253158865 2.47313278474752 0.867202405041337 -0.931439620229584 0.674490759476595 -2.3125397467769 -1.57381177211206 -2.76220025309463 2.56948860752989 -0.867202405041337 -1.28474430376494 0.481779113911854 0.835083797447213 0.546016329100101 NA 0.513897721505977 1.18838848098257 1.79864202527092 -1.0920326582002 1.12415126579433 -1.47745594932968 -1.34898151895319 -2.79431886068875 2.92279329106525 0.513897721505977 0.546016329100101 1.95923506324154 1.99135367083566 -1.44533734173556 0.513897721505977 1.02422670883483 0.174867974679117 0 1.09917012655445 0.824377594915839 0.647511129097532 0.809388911371914 -0.647511129097531 -0.674490759476595 NA NA NA -1.38865744598123 -1.5870370811214 0 0.85 -2.5 0.9 -0.7 0.638357325933206 -1.26467017401862 -0.824377594915838 0.599547341756973 0.789297697259845 -0.0143508672229063 -0.530982087247532 1.76515666841747 0.522186394433493 0 0 -0.0870310657389155 -0.0435155328694577 -0.413397562259849 0.126467017401862 -0.210778362336436 2.57149602050452 -0.548023742074734 -0.75880210441117 -1.13820315661675 0.0843113449345744 -0.126467017401862 -0.590179414542021 0.716646431943882 -0.421556724672872 0.463712397140159 -1.34898151895319 -0.75880210441117 -0.505868069607446 0.463712397140159 1.60191555375691 0.843113449345744 -0.168622689869149 -1.6440712262242 0.969580466747606 0.463712397140159 1.05389181168218 -0.29508970727101 0.843113449345744 -0.252934034803723 5.73317145555106 0.800957776878457 0.0421556724672872 -0.252934034803723 0.421556724672872 0.0843113449345744 -0.927424794280318 -1.09604748414947 0.379401052205585 0.0843113449345744 0.463712397140159 0.421556724672872 -0.463712397140159 -0.800957776878457 -0.55 0.05 0.2 1.31760985572172 -0.345088295546165 0.313716632314696 -1.09800821310143 -1.91409539851466 0.0143508672229063 NA -0.602223892389817 -0.939469272128115 0.794935537954559 -0.515787051364455 1.22995373786909 -0.0518839045751227 1.78134739041255 -0.57072295032635 -0.163001933540177 NA NA -0.873615123531417 -0.149289450432624 NA 0.963474318544071 0
RV3238C NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.25 1.10616484554162 -1.268042627816 0.115156958935028 -1.23382456001816 0.312568888537934 -0.0164509941335755 -0.0164509941335755 0.50998081814084 2.38539414936845 1.82606034882688 -0.444176841606538 0.115156958935028 -0.50998081814084 -1.13511859521671 -1.03641263041526 0.0164509941335755 0.0493529824007265 NA NA 0.469210963114153 -0.469210963114153 0.75 -1.1 0 0.65 -0.456913095129306 -0.674490759476595 0.0652732993041866 -0.630975226607137 -0.674490759476595 0.152304365043102 -0.543944160868222 0.282850963651475 0.892068423823884 -1.15316162104063 -0.58745969373768 0.500428627998764 0.543944160868222 0.500428627998764 0.239335430782018 0.0652732993041866 0.19581989791256 1.10964608817117 -0.369882029390391 -1.283708219649 -0.108788832173644 0.543944160868222 0.848552890954426 0.239335430782018 0.892068423823884 -0.805037358084968 0.543944160868222 0.413397562259849 -1.06613055530171 0 0.599547341756973 NA NA 0.3 0 0 NA -0.192711645564741 -1.15626987338845 -0.722668670867781 NA NA -0.285361475163175 0.18159366601293 -0.648548807189034 -0.337245379738298 -0.648548807189034 -0.933910282352209 -0.778258568626841 -0.0259419522875614 0.0778258568626841 -0.337245379738298 0.57072295032635 -0.985794186927332 -0.674490759476595 -0.415071236600982 -0.337245379738298 -0.648548807189034 -0.778258568626841 -0.38912928431342 -0.337245379738298 -0.726374664051718 0.0518839045751228 NA 0.441013188888543 1.63434299411637 -1.53057518496612 -1.08956199607758 -1.32303956666563 0.311303427450736 -0.518839045751227 -0.259419522875614 1.45274932810344 0.233477570588052 0.363187332025859 -0.207535618300491 0.259419522875614 0.38912928431342 0.0259419522875614 -0.57072295032635 0.544780998038789 0.0259419522875614 -0.726374664051718 -0.441013188888543 0.285361475163175 0.466955141176104 0.38912928431342 0.311303427450736 0.804200520914402 -0.518839045751227 0.674490759476595 NA -1.01173613921489 0.0632335087009308 NA NA NA NA -0.674490759476595 0.853032431102753 0.4 1.25 -0.9 -1.1 -2.1 -0.674490759476595 0.854354962003687 -0.944287063267233 0.764422860740141 NA 1.06569539997302 -1.80763523539728 -0.584558658213049 0.764422860740141 -0.134898151895319 NA -0.112415126579433 0.652007734160709 0.87287039461677 -0.37030865226166 NA NA NA NA NA -0.252934034803723 1.51760420882234 -0.632335087009308 0.0421556724672872 -0.716646431943882 -0.168622689869149 -0.337245379738297 -0.716646431943882 1.26467017401862 -0.421556724672872 0.674490759476595 -0.590179414542021 -0.126467017401862 0.252934034803723 1.6440712262242 0.969580466747606 0.674490759476595 -0.716646431943882 -0.674490759476595 1.6440712262242 0.168622689869149 0.927424794280319 0.29508970727101 1.43329286388777 -0.632335087009308 0.548023742074734 0.632335087009308 -0.0843113449345742 -0.252934034803723 0.505868069607447 -0.632335087009308 -0.632335087009308 -0.843113449345744 0.716646431943883 0.590179414542021 -0.168622689869149 0.885269121813031 0.505868069607447 -0.252934034803723 -0.584558658213049 0.404694455685957 1.93354017716624 -0.0428248101254981 0.471072911380479 1.69157999995718 -0.89932101263546 -1.64875518983168 -1.55882308856813 -0.329751037966335 NA -0.3 NA NA NA NA NA NA NA NA 0 NA -2.79743376636821 -0.065033544302151 0.0275247547910226 -0.224830253158865
[+] Show/hide bicluster #110 motif PSSM #1. bicluster 110 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 1 0 0 0
2 0.4 0.4 0 0.2
3 0 0 0 1
4 0 0.8 0 0.2
5 0 1 0 0
6 0.6 0 0 0.4
7 0 0 1 0
8 0 1 0 0
9 0 0.8 0.2 0
10 0 0 0.8 0.2
11 0.8 0 0 0.2
12 0 0 0.4 0.6
13 0 1 0 0
14 0.6 0 0 0.4
15 0.4 0 0.6 0 [+] Show/hide bicluster #110 motif PSSM #2. bicluster 110 motif PSSM #2 Mycobacterium tuberculosis H37Rv 12x4
POSITION A C G T
1 0 1 0 0
2 0 0 1 0
3 0 0.5 0.5 0
4 0 1 0 0
5 0.25 0 0.75 0
6 1 0 0 0
7 0 0 0 1
8 0 1 0 0
9 0.75 0 0.25 0
10 0 0 1 0
11 0 0.75 0 0.25
12 0 0 1 0 |