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[+] Show/hide bicluster #127 rows and columns.
bicluster 127
Mycobacterium tuberculosis H37Rv
9x240
[+] Show/hide bicluster #127 rows (genes).
bicluster 127 genes
Mycobacterium tuberculosis H37Rv
9
[+] Show/hide bicluster #127 rows (short gene names).
bicluster 127 short names
Mycobacterium tuberculosis H37Rv
9
short_name
[+] Show/hide bicluster #127 rows (long gene names).
bicluster 127 long names
Mycobacterium tuberculosis H37Rv
9
long_name
[+] Show/hide bicluster #127 rows (NCBI RefSeq gene IDs).
bicluster 127 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
18
[+] Show/hide bicluster #127 gene upstream sequences.
bicluster 127 upstream sequences
Mycobacterium tuberculosis H37Rv
9
upstream
[+] Show/hide bicluster #127 columns (arrays; conditions).
bicluster 127 arrays
Mycobacterium tuberculosis H37Rv
240
[+] Show/hide bicluster #127 ratios.
bicluster 127 ratios
Mycobacterium tuberculosis H37Rv
9x240
GENES 2867:::H37Ra..7H9.shake.replicate.1 2867:::H37Rv..Sauton.s.media.replicate.2 2867:::H37Rv..Sauton.s.media.replicate.3 2885:::H37Ra..7H9.roll.replicate.3 2885:::Strain.9800608...replicate.3 2885:::Strain.CDC1551..replicate.1 2885:::Strain.CDC1551..replicate.4 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.1 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.2 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.3 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.5 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.6 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.1 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.2 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.3 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.5 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.1 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.3 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.5 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.6 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.3 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.5 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.6 4082:::H37Rv.wild.type.Vs.Rv3676.null.4 4082:::Rv3676.null.Vs.H37Rv.wild.type.4 4084:::High.iron.wt.vs.high.iron.ideR.KO.1b 4084:::High.iron.wt.vs.high.iron.ideR.KO.3a 4084:::High.iron.wt.vs.high.iron.ideR.KO.3b 4084:::High.iron.wt.vs.low.iron.wt.2a 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.1 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.2 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.2 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.3 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.5 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.6 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.3 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.1 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.6 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6 4101:::H37Rv.Day14.3 4101:::H37Rv.Day24.3 4101:::H37Rv.Day6.3 4101:::NRP.Day6..3 4101:::NRP.Day8..3 4107:::DIPED..50ug.mL..DMSO..12h 4107:::DIPED.10ug.mL.vs.DMSO.12h.1 4107:::DIPED.5ug.mL.vs.DMSO.12h.1 4107:::EMB..10ug.mL..DMSO..12h 4107:::EMB.10ug.mL.vs.DMSO.12h.3 4107:::EMB.10ug.mL.vs.DMSO.12h.4 4107:::pH4.8vspH6.8..11h. 4107:::pH5.2vspH6.8..11h. 4107:::Rif.5ug.mL.vsDMSO.2.5hA 4107:::Succinate.7H9.based.medium..1 4107:::Succinate.7H9.based.medium..2 4107:::X.241..10ug.mL..DMSO..12h..2 4107:::X0.15mg.mL.TricvsEtOH..6h 4107:::X0.15mg.mL.TricvsEtOH..6hA 4107:::X0.1mg.mL.TriclosanvsEtOH..6hA 4107:::X0.2ug.mL.Mtm.ctrl..4h...2 4107:::X0.2ug.mL.Mtmvsctrl..4h. 4107:::X0.5ug.mL..111895vsDMSO.6h 4107:::X10mM.Succinate.10mM.Gluc..1 4107:::X200uM.Dipyridylvsctrl..6h 4107:::X200uM.Dipyridylvsctrl..6hA 4107:::X20uM.DCCD.DMSO..6h..1 4107:::X24ug.mL.cltrmazole.DMS..6h..2 4107:::X40ug.mL.5CL.pH5.6..2h..1 4107:::X4mM.H2O2vsctrl..2h. 4107:::X50ug.mL.Thioridazine.DMSO..6h 4363:::H37Rv.hypoxia.1.day.rep.4 4363:::H37Rv.hypoxia.1.day.rep.5 4363:::H37Rv.hypoxia.1.day.rep.7 4363:::H37Rv.hypoxia.12hr.rep.3 4363:::H37Rv.hypoxia.4.day.rep.1 4363:::H37Rv.hypoxia.4hr.rep.4 4363:::H37Rv.hypoxia.8hr.rep.2 4363:::H37Rv.hypoxia.8hr.rep.3 4364:::H37dosR.mutant.hypoxia.4hr.rep.1 4364:::H37dosR.mutant.hypoxia.4hr.rep.2 4365:::H37Rv.diamide.1h.rep.1 4365:::H37Rv.diamide.1h.rep.4 4365:::H37Rv.diamide.1h.rep.5 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.3 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.2 4396:::Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4396:::Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.5 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.2 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.5 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.6 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.6 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep1 4575:::Extracted.Lung.Surfactant.30min.rep.2 4575:::Extracted.Lung.Surfactant.30min.rep.3 4575:::Purified.Human.SP.A.Coated.2hrs.rep1 4575:::Whole.Lung.Surfactant.2hrs.rep.2 4575:::Whole.Lung.Surfactant.30min.rep.3 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.2 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages.rep.2 4615:::AA_30uM_10.min_07 4615:::AA_30uM_24h_02 4615:::AA_30uM_2h_07 4615:::AA_30uM_4h_01 4615:::AA_30uM_4h_09 4615:::AA_3uM_10.min_01 4615:::AA_60uM_24h_03 4615:::Acetate.3mM.10m.01 4615:::Acetate.3mM.30m.08 4615:::CHP_25uM_2h_01 4615:::CHP.AA.2h.1 4615:::CK.for.AA.NA.24h 4615:::CK.for.MDG.OA.Na.24h 4615:::Glucose_20mM_1h.OA_50uM_10min 4615:::L2A_30uM_2h_05 4615:::L2A_30uM_30min_01 4615:::L2A_30uM_30min_02 4615:::L2A_30uM_30min_04 4615:::MTB1254_Bottom_21D_01 4615:::MTB1254_Pellicle_10D_01 4615:::MTB1254_Pellicle_10D_02 4615:::MTB1254_SDS_90MIN_04 4615:::MTB1254.0485.1._PA_4h_04 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_01 4615:::OA_50uM_10min_01 4615:::OA_50uM_2h.1.5..BSA_30min_01 4615:::OA_50uM_30min_09 4615:::OA50um_10min.10mM_G_20min 4615:::PA_10uM_10min_02 4615:::PA_300uM_24h_T0_01 4615:::PA_50uM_10min_06 4615:::PA_50uM_10min_T0_01 4615:::PA_50uM_1h_01 4615:::PA_50uM_1h_10 4615:::PA_50uM_2h_08 4615:::PA_50uM.AA_30uM_30min_02 4615:::PA_50uM.OA_10uM_30min_02 4615:::PA_50uM.OA_30uM_2h_04 4615:::PA_50uM.OA_30uM_30min_01 4615:::PA_50uM.OA_30uM_30min_02 4615:::PA_50uM.OA_30uM_4h_05 4615:::Rv.MT71_100603_01 4615:::Rv.p0485.1. 4615:::Rv.p0485.1._OK 4615:::Rv.pMV261Km._300uM.PA_10m 4615:::SDS_60min_01 4615:::Starvation_OA50_24h_04 4615:::Starvation_OA50_6h_04 4615:::Starvation_T0 4615:::TBD098 4615:::TBD099 4615:::TBD1113 4615:::TBD625 4615:::TBD664 4615:::TBE055 4615:::WM_1254.whiB4._10d_03 4615:::WT_85.1_PA_10min_02 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.1 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.2 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.3 4638:::CDC1551.wild.type.vs.kstR.null.rep.1 4638:::CDC1551.wild.type.vs.kstR.null.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.2 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak24hr.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1 4703:::Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.1 4731:::X10ug.ml.Ethambutol.vs.DMSO.12hrs.3 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.3 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.4 4802:::H37Rv.ctrl.vs.relE2.overexpression.6.hr.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.3 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.1 4928:::Mtb.Erdman.strain.200.ppm.CO.rep.1 4928:::Mtb.Erdman.strain.2000.ppm.CO.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.2 Raghavan_Nature2008:::Complemented.espR.mutant..R...rep3 Raghavan_Nature2008:::espR.mutant..R...rep2 Rohde_CellHostMicrobe2007:::CDC1551.ctrl.vs.pH.6.5.7H9.broth.for.2.hr
RV0601C -1.98974774045596 0.0337245379738298 0.101173613921489 -0.548023742074733 0.632335087009308 -0.126467017401862 -0.927424794280319 0.674490759476595 -0.532492704849943 -0.106498540969989 0.674490759476595 -0.816488814103247 -0.212997081939977 0.390494650223292 1.34898151895319 1.10048492335655 -0.0709990273133258 -0.212997081939977 -0.24849659559664 -0.603491732163269 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.674490759476595 0.674490759476595 0.1 -0.6 -0.75 0 0.381233907530249 0.909096241033672 1.05572466700684 0.234605481557077 1.17302740778538 -0.674490759476595 -0.0586513703892691 1.14370172259075 -0.527862333503422 -0.586513703892691 -1.20235309298002 -2.19942638959759 -0.0879770555839037 -0.45 -0.45 0.518839045751227 -0.544780998038788 0.674490759476595 NA 0.882026377777086 0.311303427450736 -0.726374664051718 0.702594541121453 -0.0281037816448581 -0.0843113449345744 0.75880210441117 1.65812311704663 -0.0562075632897163 -1.29277395566347 -0.871217230990602 2.05157606007464 1.01173613921489 0.843113449345744 0.843113449345744 0.75880210441117 0.702594541121453 0 -1.34898151895319 -0.533971851252305 -0.309141598093439 1.46139664553262 0.365349161383156 0.365349161383156 NA -0.0281037816448581 -1.03983992085975 0.0281037816448581 0.196726471514007 NA NA NA NA NA NA NA NA -0.417541898723607 0.513897721505977 -0.240889556955927 0 -1.30080360756201 0.674490759476595 0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.337245379738298 -1.60687504463542 0.932384285158823 0.575300941906508 -0.178541671626158 0.0595138905420525 1.01173613921489 1.09108799327096 NA -0.682026969079686 -0.346665641742161 2.10637058406378 -1.49216950141191 -0.177100925672625 1.393699138366 NA -1.05831699276991 NA NA 0.647511129097532 0.242816673411574 -0.91730743288817 -0.836368541750978 0.107918521516255 0.701470389855659 0.161877782274383 NA -0.188857412653447 -0.296775934169702 -1.59179819236476 NA -0.485633346823149 1.21408336705787 0.755429650613787 -0.269796303790638 0.21583704303251 -1.37596114933225 -0.593551868339404 -0.296775934169702 0.134898151895319 -2.77890192904357 -0.323755564548766 -0.836368541750978 0.890327802509106 0.269796303790638 -1.16012410629974 0.404694455685957 1.59179819236476 1.72669634426008 1.67273708350196 -0.323755564548766 -0.944287063267233 NA NA -0.728450020234723 -4.12788344799676 -1.8615944961554 -0.755429650613787 -0.863348172130042 -0.431674086065021 0.593551868339404 0.998246324025361 0.998246324025361 0.377714825306893 0.0809388911371914 -0.161877782274383 -1.32200188857413 -1.02522595440442 -1.99649264805072 0.0269796303790638 -0.674490759476595 0.539592607581276 0.269796303790638 0.458653716444085 1.24106299743694 0.539592607581276 0.358771680572657 0.681473065475318 -0.633993384684005 0.754089047862032 -0.740124435864587 0.633993384684005 -2.66820609263535 0.0495949087850438 0.0694328722990613 -0.295667182236316 0.415781975019819 0.351104778905625 -0.619053162807286 1.16418953005549 0.374717088598109 -0.327384403722558 0.319495622909966 NA NA NA NA NA NA 0.65 1.81470132906798 NA NA NA NA -0.360503681789215 0.192711645564741 -0.755429650613787 0.836368541750978 0.0809388911371913 -0.647511129097532 1.07681858091877 1.63297762820649 NA -0.646715794688064 0.737131008327717 NA 0.00277568213776377 -0.267853326294203 1.14557298280677
RV1745C -0.721007363578429 -1.00010698818943 -0.907073779985766 -0.698579715172188 1.22853674047523 -0.457690158216261 -0.216800601260334 0.95 -0.8 0.05 -0.3 1 -0.9 0.1 0.15 1.55 0.4 0.2 0.25 -0.4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.674490759476595 0.674490759476595 -1.25 -0.65 -0.0499999999999999 0.6 0.521197405050096 1.53293354426499 0.551856075935396 -0.214610696197099 0.245269367082398 -0.735808101247195 -0.735808101247195 0.398562721508897 -1.34898151895319 -2.69796303790638 -2.14610696197098 -4.50682462013907 -0.337245379738298 NA 0.337245379738298 -0.369363987332421 0.465719810114792 -0.0802965189853089 2.42495487335633 0.754787278461904 -0.594194240491286 -0.819024493650151 1.88857412653447 NA NA NA 0.917307432888169 NA -0.188857412653447 -0.21583704303251 1.48387967084851 0.485633346823149 0.836368541750978 1.8615944961554 1.21408336705787 0.431674086065021 0.809388911371914 NA NA -0.56657223796034 NA NA 0.863348172130042 1.88857412653447 0.404694455685957 -3.15661675435047 -0.998246324025361 3.15661675435047 NA NA NA NA NA NA NA NA NA NA -1.86287924045917 0 -1.0920326582002 0.674490759476595 0.1 1.18035882908404 1.34898151895319 -1.39113719142048 0.674490759476595 -0.421556724672872 -1.01173613921489 -0.463712397140159 0.3 -2.8 NA 0.3 0.35 1.2 -0.15 -1.65 1.4 -0.674490759476595 -1.88147422380313 NA 1.31348200529653 -0.141998054626652 -0.532492704849943 0.922987355073235 2.2009698467131 NA 0.00832704641329131 -0.524603924037352 1.80696907168421 -4.12188797457919 -0.358062995771526 NA NA NA NA NA 1.03421916453078 0.404694455685957 NA -0.247313278474752 -1.12415126579433 1.14663429111021 0.179864202527092 -0.224830253158865 -0.134898151895319 -1.03421916453078 -1.48387967084851 NA 1.5063626961644 1.43891362021674 -0.607041683528936 -0.786905886056028 -0.562075632897163 -0.921804037951347 -2.24830253158865 -0.876837987319574 -1.64126084805972 -1.97850622779801 -1.57381177211206 -1.39394756958496 0.876837987319574 0.96677008858312 -1.93354017716624 1.77615899995503 -0.427177481001844 NA 1.91105715185035 -0.314762354422411 -1.43891362021674 0.089932101263546 NA -0.741939835424255 -1.61877782274383 -1.43891362021674 -0.809388911371914 -1.88857412653447 -0.404694455685957 0.089932101263546 0.719456810108368 0.719456810108368 0.584558658213049 -1.23656639237376 NA -2.06843832906156 -1.64126084805972 -2.87782724043347 0.831871936687801 -0.696973784792482 NA 0.314762354422411 1.28153244300553 0.427177481001844 0.224830253158865 0.192711645564741 0.922056656213323 -0.775538064267096 0.517867437051318 -0.972580308608574 0.573443454686094 -1.71107655825115 -0.212997081939977 1.36318132441586 -0.599547341756973 1.1776822784512 -0.321186075941236 -1.28474430376494 0.749434177196217 -0.403371924785022 -0.0198379635140174 0.879483049121443 0.536133680609601 -1.95429373899629 0.276714157733988 0.276714157733988 -1.24521370980294 -3.63187332025859 1.49560994492636 2.07853274859114 1.15 NA -0.183952025311799 NA -0.643832088591295 -0.674490759476595 -2.32890205630598 1.18354038927025 0.521775870538498 0.0890836852138899 0.5 -0.2 NA NA NA NA 0 NA -1.70944592327726
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RV2891 NA NA NA NA NA NA NA NA 0 0 0.207535618300491 -0.830142473201963 -0.778258568626841 0.752316616339279 0.674490759476595 0.518839045751227 0.0259419522875613 -0.622606854901472 0.0259419522875613 -0.907968330064647 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.690941753610171 0.690941753610171 -1.45 -1.3 -0.5 0 0.95985223463977 0.907968330064647 NA 0.57072295032635 1.03767809150245 -0.337245379738298 -0.0778258568626841 -0.752316616339279 -2.93144060849443 -2.41260156274321 -0.466955141176104 -1.24521370980294 0.38912928431342 0.505868069607446 0.446850128153244 NA NA NA NA NA NA NA 0.429221392394197 0.122634683541199 0.122634683541199 0.613173417705996 1.16502949364139 0.643832088591295 -0.367904050623597 0.337245379738298 0.490538734164797 1.16502949364139 NA 0.827784113903094 1.83952025311799 1.90083759488859 0.306586708852998 -1.83952025311799 -0.551856075935396 -0.367904050623597 1.13437082275609 0.122634683541199 0.245269367082398 1.59425088603559 0.0613173417705996 NA -1.31832284806789 2.39137632905338 NA NA NA NA NA NA NA NA -0.988637140602681 0.157073190563043 -0.2 0.65 0.45 1.7 0.674490759476595 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.168622689869149 -1.48387967084851 1.88857412653447 0.910562525293404 0 -0.0674490759476595 0.674490759476595 -0.404694455685957 NA -0.418837003868531 0.168622689869149 2.13770055221211 -1.59375639134389 -0.560262485694269 1.42718334613888 -0.234605481557077 -2.22875207479223 NA NA 1.98797276477312 0.141998054626652 0 -0.532492704849944 -0.319495622909966 1.06498540969989 -0.425994163879955 0.993986382386562 -0.425994163879955 0 -1.20698346432654 NA 1.13598443701321 0.745489786789921 -0.780989300446584 -0.887487841416573 -0.390494650223292 -1.02948589604322 -0.283996109253303 -0.532492704849944 -0.958486868729899 -2.34296790133975 -0.638991245819932 -1.06498540969989 1.02948589604322 0.461493677536618 -0.745489786789921 1.27798249163986 0.887487841416573 0.709990273133258 0.638991245819933 -0.0709990273133257 -0.212997081939977 0.922987355073236 NA -1.10048492335655 -2.83996109253303 -2.62696401059306 -0.461493677536618 -0.532492704849944 -0.567992218506607 0.496993191193281 0.283996109253303 0.283996109253303 0.0354995136566629 -0.674490759476595 -0.0709990273133257 -1.31348200529653 -0.567992218506607 -0.958486868729899 0.922987355073236 -1.27798249163986 0.922987355073236 -0.496993191193281 -0.496993191193281 -0.496993191193281 0.354995136566629 0.357083343252315 0.609298344062501 -0.564165133391204 0.74469797607639 -0.73968317489069 0.564165133391204 -2.52344444979006 0.0801842161615533 1.45746604670117 -0.646771961141941 -0.443500773354474 -0.535896767803322 -0.314146381126085 0.443500773354474 -0.354995136566629 -0.686323930695483 0.260329766815528 0.891291360736929 -1.68622689869149 0.0963558227823708 1.44533734173556 -0.529957025303039 -0.794935537954559 0.106498540969989 1.20235309298002 0.275 -0.425 NA NA -0.481779113911854 0.296775934169702 0.751575417702492 1.05991405060608 1.00210055693666 -0.443236784798905 0.145835839886831 0.51042543960391 -0.152592694826573 -0.758630377191197 0.590351141761994 NA -0.7325 0.4425 -0.948499899162889
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RV3286C -0.55 -2.15 0 -0.168622689869149 -0.809388911371914 -0.134898151895319 -0.134898151895319 0.52694590584109 -0.484790233373803 0.695568595710239 0.948502630513962 0.653412923242952 0.611257250775664 0.0210778362336436 -0.0210778362336436 0.569101578308377 0.484790233373803 -0.316167543504654 -0.52694590584109 -0.52694590584109 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.533318274934982 0.533318274934982 -0.35 -0.85 -0.1 0.6 -0.353304683535359 -0.321186075941236 0.546016329100101 0.513897721505977 NA -0.738727974664842 0.546016329100101 0.513897721505977 -0.770846582258966 -1.18838848098257 -1.67016759489443 -1.83076063286504 -1.6380489873003 0.790418858761635 0.558562660191555 -0.967747611422941 -0.821119185449768 NA NA 1.43695857453709 -0.175954111167807 -0.351908222335615 0.919760126558993 1.65556822780619 1.50227487337969 0.429221392394197 0.643832088591295 1.62490955692089 -0.306586708852998 -0.643832088591295 2.14610696197098 2.75928037967698 2.60598702525048 -0.0613173417705996 1.87017892400329 0.950418797444293 -0.122634683541199 0.153293354426499 -0.0919760126558993 0 2.02347227842979 2.08478962020039 0.766466772132494 1.22634683541199 1.19568816452669 -1.04239481010019 -0.306586708852998 3.37245379738298 0.724085668261639 0.148784726355131 0.218217598654193 -0.228136580411201 -0.347164361495306 0.267812507439236 -2.11274311424286 -1.21011577435507 -0.153831225845539 0.674490759476595 -1.9 0.55 0 1.55 0.71416668650463 0.764422860740141 0.719456810108368 -0.674490759476595 -0.404694455685957 -0.404694455685957 -0.134898151895319 -1.52884572148028 -0.95 -0.45 -0.7 0.6 0.1 0.25 1.2 -1.65 -0.1 -1.18035882908404 NA 1.25530224680366 NA -0.693226613906501 0.65575490504669 0.20609439872896 0.168622689869149 -0.875 -0.421556724672872 0.0843113449345745 0.75880210441117 -2.33261387652323 -0.0843113449345745 0.696248525911324 0.870310657389155 -0.174062131477831 0.543944160868222 0.652732993041866 0.833194467588735 0.15870370811214 0 0.15870370811214 0 0.357083343252315 0.87287039461677 0.912546321644805 -0.31740741622428 -0.833194467588735 -0.991898175700875 -0.119027781084105 1.15060188381302 -0.357083343252315 -0.95222224867284 -0.674490759476595 -0.277731489196245 -0.119027781084105 -0.39675927028035 -0.71416668650463 -0.15870370811214 -0.198379635140175 -0.833194467588735 -1.07125002975695 0.991898175700875 1.03157410272891 -0.833194467588735 -0.0793518540560699 0.912546321644805 NA 0.39675927028035 0.47611112433642 -2.02347227842979 0.119027781084105 1.42833337300926 -1.50768522706533 -0.833194467588735 -1.74574078923354 -0.55546297839249 -0.039675927028035 0.277731489196245 0.357083343252315 0.63481483244856 0.63481483244856 0.119027781084105 -0.436435197308385 -1.22995373786909 -1.98379635140175 0.119027781084105 -0.15870370811214 NA -1.50768522706533 0.23805556216821 0.31740741622428 1.19027781084105 2.02347227842979 0.515787051364455 0.55 0.810572228493803 -0.928903940682679 0.538409290459387 -0.928903940682679 0.502909776802724 -3.19990964960989 -0.282344969083226 0.407831622009104 -1.275 0.825 -0.825 -1.625 2.225 -0.0329019882671509 0.592235788808718 0.098705964801453 1.41172484541613 -0.282344969083226 0.0941149896944087 0.815663244018208 -1.53721149834201 -1.78818480419376 0.55 0.175 1.125 -0.375 NA 0.68947944302052 -0.719456810108368 0 -0.198015635809643 0.915822315619597 -0.259895522000156 -0.903446338381494 0.75 -0.05 NA NA NA NA -0.457172734346905 1.71922704324822 -3.19325
RV3287C 0.232583020509171 -1.00010698818943 -1.06988189434219 -0.154169316451793 0.289067468347112 NA 0.501050278468328 -0.192711645564741 -0.931439620229584 0.80296518985309 -0.256948860752989 -0.610253544288348 -0.0963558227823707 NA 0.80296518985309 1.05991405060608 0 -0.706609367070719 NA -0.417541898723607 0 -2.14799364941008 -0.809388911371914 -0.311303427450736 0.321680208365761 0.923533501437184 -0.124521370980295 -0.674490759476595 0.809388911371914 1.38011186169826 0.0830142473201963 0.238665961045564 -0.923533501437184 -0.674490759476595 0.259419522875614 -0.539592607581276 0.539592607581276 -1.05772414554284 NA 0.0766466772132495 0.413892056951547 0.734445493652293 0.374717088598108 1.15412863288217 0.674490759476595 0.374717088598108 -0.044966050631773 -0.79440022782799 0.5545812911252 0.704468126564444 -0.674490759476595 -0.614536025300898 -0.734445493652293 -0.464649189861654 0.29508970727101 NA -0.735808101247195 -0.950418797444293 2.02347227842979 1.77820291134739 1.19568816452669 -1.10371215187079 NA -0.392835277497358 -0.140827740989619 0.11117979551812 -0.511427059383352 -0.0963558227823707 -0.214947604668366 0.303891441082862 -0.229771577404115 -0.155651713725368 2.72019899701001 2.48301543323802 0.11117979551812 3.40210174285447 2.7498469424815 0.630018841269347 -2.34959967861627 -1.94935241475104 -0.466955141176104 0.526251032119102 0.748610623155342 0.466955141176104 2.73502296974575 0.274243495611363 0.644842814005096 NA 3.78752503398396 0.615839389087326 0.351908222335615 0.215055024760654 -0.0879770555839037 -1.26100446336929 0.312807308742769 -1.75954111167807 -0.948197154626518 -0.674490759476595 0.120444778477963 -0.689820094919245 -0.0766466772132495 NA 0.505868069607446 NA 1.11990918554604 1.09445670405636 -0.53450211128334 0 -0.916289333628582 -0.789026926180168 -1.17081414852541 -0.252934034803723 -1.05389181168218 -0.716646431943882 0.548023742074734 0.927424794280318 0.674490759476595 0.126467017401862 -1.05389181168218 0.75880210441117 -0.775664373398084 -0.236071765816808 NA 0.595800170870992 -0.573317145555106 0.348486892396241 -0.348486892396241 0.505868069607446 0.0750000000000006 -0.275928037967698 0.0306586708852998 0.674490759476595 -1.99281360754449 0.0306586708852998 0.858442784788394 1.24386607591788 -2.04975113918861 -0.0525577215176568 0.43798101264714 0.297569452710263 0.07935185405607 -0.853032431102753 -0.932384285158823 -0.813356504074718 -0.039675927028035 0.15870370811214 0.119027781084105 -0.95222224867284 0.416597233794368 -1.11092595678498 -0.932384285158823 0.614976868934543 -0.0198379635140175 -1.09108799327096 -1.11092595678498 -1.2497917013831 -0.47611112433642 -0.198379635140175 -0.654652795962578 -0.7935185405607 -1.48784726355131 0.654652795962578 -1.03157410272891 -0.297569452710263 1.90444449734568 -0.972060212186858 1.130763920299 0.376921306766333 NA 0.853032431102753 -0.198379635140175 -0.912546321644805 -0.376921306766333 3.39229176089699 0.0595138905420525 -1.48784726355131 -1.96395838788773 -0.595138905420525 -0.912546321644805 -0.55546297839249 -0.0595138905420525 0.31740741622428 0.31740741622428 0.257893525682228 -0.23805556216821 -0.575300941906508 0.337245379738298 -2.45990747573817 -1.64655097166345 0.039675927028035 0.0595138905420525 1.01173613921489 -0.0595138905420525 1.64655097166345 1.42833337300926 0.39675927028035 0.872506395286238 0.953825316431549 -0.838003670864861 0.51097784808833 -0.912947088584482 0.497351772139308 0.551856075935396 -0.683924196672072 0.608456699108257 -0.32940246393043 1.20780903441158 -0.768605749171004 -0.737234085939534 2.36856057397595 -0.69815710191437 -0.0118331712188876 0.0591658560944382 1.53634006325224 0.437169936697793 -0.0374717088598109 0.686981329096532 -1.36147208857313 -0.662000189856658 0.963558227823707 -0.107062025313745 -0.6 -0.7 0.685547985041785 NA 0 -0.089932101263546 -0.312161012650325 0.52398455694876 0.42364708859687 0.557430379732723 0.602223892389817 -0.216800601260334 -0.421473821803942 -0.721274597442248 0.674490759476595 NA 0 NA -2.4275
[+] Show/hide bicluster #127 motif PSSM #1. bicluster 127 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0.6 0.4 0 0
2 0.4 0 0.2 0.4
3 0 0.6 0.4 0
4 0 0 1 0
5 0 0.8 0.2 0
6 0.6 0 0 0.4
7 1 0 0 0
8 0.4 0.4 0 0.2
9 0 1 0 0
10 0 0.2 0 0.8
11 1 0 0 0
12 0.4 0.6 0 0
13 0.6 0.4 0 0
14 0 0 1 0
15 0 0.2 0.4 0.4
16 0.8 0 0.2 0
17 0.2 0 0.8 0
18 0.4 0.6 0 0
19 0 0 1 0
20 0.2 0 0 0.8
21 0.4 0.6 0 0
22 1 0 0 0
23 0 0.4 0 0.6
24 0 0 0 1 [+] Show/hide bicluster #127 motif PSSM #2. bicluster 127 motif PSSM #2 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0.142857 0.285714 0.571429
2 0.142857 0 0 0.857143
3 0 1 0 0
4 0 0.142857 0.857143 0
5 0.428571 0.285714 0 0.285714
6 0 0 0.428571 0.571429
7 0 0.285714 0.285714 0.428571
8 0 0 1 0
9 0.142857 0.285714 0 0.571429
10 0.02631 0.902261 0.045118 0.02631
11 0.312024 0.045118 0.330833 0.312024
12 0.02631 0.47369 0.330833 0.169167
13 0.454882 0.330833 0.045118 0.169167
14 1 0 0 0
15 0 0.285714 0.714286 0
16 0 0.857143 0 0.142857
17 0 0.428571 0.571429 0
18 0 1 0 0
19 0 0.571429 0.142857 0.285714
20 0 0 0.714286 0.285714
21 0 1 0 0
22 0 1 0 0
23 0.02631 0.759404 0.045118 0.169167
24 0.02631 0.045118 0.187976 0.740596 |