GENES 2867:::H37Ra..7H9.shake.replicate.2 2885:::H37Ra..7H9.roll.replicate.1 2885:::H37Ra..7H9.roll.replicate.2 2885:::H37Rv..7H9.roll.replicate.1 2885:::H37Rv..7H9.roll.replicate.2 2885:::H37Rv..7H9.roll.replicate.3 2885:::Strain.1006...replicate.3 2885:::Strain.1843..replicate.1 2885:::Strain.9800608...replicate.3 2885:::Strain.9800608..replicate.4 2885:::Strain.9802826..replicate.1 2885:::Strain.H37Ra..replicate.4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.2 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.3 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.2 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.4 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.1 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.2 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.3 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.4 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.2 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.2 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4 4082:::H37Rv.wild.type.Vs.Rv3676.null.1 4082:::H37Rv.wild.type.Vs.Rv3676.null.2 4082:::H37Rv.wild.type.Vs.Rv3676.null.3 4082:::H37Rv.wild.type.Vs.Rv3676.null.4 4082:::Rv3676.null.Vs.H37Rv.wild.type.1 4082:::Rv3676.null.Vs.H37Rv.wild.type.2 4082:::Rv3676.null.Vs.H37Rv.wild.type.3 4082:::Rv3676.null.Vs.H37Rv.wild.type.4 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.3 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.2 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.1 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.vs..MTB1254.rep1 4089:::MTB1254.vs..MTB1254.rep2 4089:::MTB1254.vs..MTB1254.rep3 4089:::MTB1254.vs..MTB1254.rep4 4089:::MTB1254.vs..MTB1254.rep5 4101:::NRP.Day14..2 4101:::NRP.Day14..4 4101:::NRP.Day6..1 4107:::EMB.10ug.mL.vs.DMSO.12h.1 4107:::pH4.8vspH6.8..5h. 4107:::pH4.8vspH6.8..6h. 4107:::pH5.2vspH6.8..5h. 4107:::pH5.6vspH6.8..4h. 4107:::X0.1mg.mLTriclosanvsEtOH.6hC 4107:::X0.2mg.mL.AmpvsEtOH..6h 4107:::X0.2ug.mL.Mtmvsctrl..4h.B 4107:::X0.4mM.NaN3vsDMSO..4h 4107:::X0.5ug.mL..111895vsDMSO.6h 4107:::X0.5ug.mL..124196vsDMSO..6h 4107:::X20ug.mL.Prcp.6778.DMSO..6h..1 4107:::X4mM.H2O2vsctrl..1h. 4107:::X60ug.mL.ChlorprovsEtOH..6h 4363:::H37Rv.hypoxia.1.day.rep.3 4363:::H37Rv.hypoxia.12hr.rep.3 4363:::H37Rv.hypoxia.4.day.rep.1 4363:::H37Rv.hypoxia.7.day.rep.5 4363:::H37Rv.hypoxia.8hr.rep.3 4364:::H37dosR.mutant.hypoxia.1.day.rep.5 4364:::H37dosR.mutant.hypoxia.12hr.rep.3 4364:::H37dosR.mutant.hypoxia.8hr.rep.3 4365:::H37Rv.diamide.1h.rep.6 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.5 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.2 4396:::Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.2 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.6 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep1 4575:::Whole.Lung.Surfactant.2hrs.rep.1 4575:::Whole.Lung.Surfactant.30min.rep.2 4615:::AA_30uM_2h_05 4615:::AA_30uM_4h_05 4615:::aceatate.induction.2 4615:::Acetate.3mM.2h.04 4615:::Acetate.3mM.2h.05 4615:::Acetate.3mM.60m.02 4615:::C2_ceramide_25uM_1h_01 4615:::CK.for.MDG.4h.PA.NA 4615:::CK.OA_NA_2H 4615:::CK.OA.Na.24h.1 4615:::CK.PA.NA.2h.02..100901 4615:::ETYA_10uM_1h_02 4615:::ETYA_30uM_10min.05 4615:::L2A_30uM_1h_05 4615:::L2A_30uM_30min_07 4615:::MDGCy3.7H9Cy5.02 4615:::MTB1254_FA5_10min_03 4615:::MTB1254_Pellicle_14D_01 4615:::MTB1254_SDS_90MIN_04 4615:::MTB1254.B4.1.Compl._PA_30MIN_03 4615:::MTB1254.B4.1.Compl._PA_30MIN_04 4615:::MTB1254.Rv0465c.4._PA50.OA30_30m_01 4615:::MTB1254.Rv3524.2._PA50.OA30_2h_02 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_01 4615:::MTB1254.Rv3524.2.compl._PA50.OA30_30m_02 4615:::MTB1254whiB4_SDS_90MIN_02 4615:::MTB6548_PA50_1h_01 4615:::OA_50uM_2h_03 4615:::OA_50uM_2h_05 4615:::OA_50uM_2h_06 4615:::OA_50uM_2h_07 4615:::PA_10uM_10.min_01 4615:::PA_300uM_2h_T0_01 4615:::PA_50uM_24h_T0 4615:::PA_50uM.AA_30uM_30min_04 4615:::PA_50uM.OA_10uM_4h_01 4615:::PA_50uM.OA_30uM_30min_03 4615:::Rv.MT71_100703_01 4615:::Rv.MT90_100503_02 4615:::Rv.MT90_100903_01 4615:::Rv.MT96_100703_01 4615:::Rv.p0485.2._300uM.PA_4h 4615:::SDS_3h_01 4615:::SDS_60min_01 4615:::Starvation_1254_24h_01 4615:::Starvation_1254_24h_02 4615:::Starvation_1254_24h_04 4615:::Starvation_1254_24h_06 4615:::Starvation_1254_3d_02 4615:::Starvation_1254_3d_03 4615:::Starvation_1254_6h_01 4615:::Starvation_1254_6h_02 4615:::Starvation_1254_6h_06 4615:::Starvation_1254_OA50_12h_01 4615:::Starvation_1254_OA50_5d_02 4615:::Starvation_1254_OA50_5d_04 4615:::Starvation_1254_PA50.OA30_24h_03 4615:::Starvation_OA50_24h_01 4615:::Starvation_T0 4615:::Succinate_10mM_30min_01 4615:::TBD1137 4615:::TBD819 4615:::Test_361.1 4615:::Test.3 4615:::WT_WhiB4_PA_10min_01 4615:::X2.2..Dipyridyl_0.2mM.Dpd.AA_50uM_01 4615:::X2.BA.OA.1 4615:::X7H9_MTB1254.3524.1._OA100_10M_01 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.1 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.2 4638:::CDC1551.wild.type.vs.kstR.null.rep.2 4638:::CDC1551.wild.type.vs.kstR.null.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.2 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3 4699:::CDC1551.Ctrl.vs.H37Rv.rep.3 4703:::CDC1551.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.5 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.3 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.4 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.1 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.1 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.4 4802:::H37Rv.ctrl.vs.relE3.overexpression.24.hr.rep.2 4928:::Mtb.Erdman.strain.2000.ppm.CO.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.1 Rohde_CellHostMicrobe2007:::CDC1551.ctrl.vs.pH.5.5.7H9.broth.for.2.hr RV0005 1.2205070885767 0.20753561830049 0.907968330064647 0.518839045751227 0.856084425489524 1.29709761437807 -0.778258568626841 -0.674490759476595 -1.11550394836514 1.21927175751538 -0.700432711764157 1.19332980522782 0.0204391139235337 -0.429221392394197 1.29157805006157 0.602736423362064 2.43964742789407 2.52575263123151 2.12392834899013 2.23873528677338 -0.430526016687188 0.143508672229063 2.26743702121919 -2.49705089678569 -2.49705089678569 0.315719078903938 1.26287631561575 -0.803648564482752 -0.889753767820189 -0.430526016687188 0.832350298928564 1.03326244004925 1.40638498784482 NA NA NA NA NA NA NA NA -1.03983992085975 -0.983632357570035 -2.27640631323351 -2.02347227842979 -1.57381177211206 -1.12415126579433 -1.09604748414947 NA 0.674490759476595 NA -2.97900085435496 -3.31624623409326 -2.92279329106525 -4.29987859166329 -1.91105715185035 NA -0.786905886056028 -0.0562075632897163 -0.89932101263546 1.18035882908404 0.337245379738298 NA 0.393452943028014 0.89932101263546 -0.309141598093439 0.365349161383156 -0.196726471514007 0.702594541121453 0.562075632897163 1.2084626107289 0.196726471514007 1.12415126579433 0.309141598093439 -1.51760420882234 -2.55744412968209 -1.34898151895319 NA -0.702594541121453 -0.955528575925176 0.365349161383156 0.112415126579433 -0.252934034803723 -0.337245379738298 NA -1.01173613921489 -1.45274932810344 0.856084425489525 -0.140938367651826 -1.24831125634474 -0.926166415997713 -0.765093995824198 0.0402681050433788 0.100670262608447 1.40938367651826 -0.724825890780819 NA 0.483217260520546 0.543619418085614 NA -1.67112635930022 -2.13420956729908 -0.0991898175700875 0.862951412859762 4.00726862983154 -3.35261583386896 0.23805556216821 1.04846583403788 1.13528147634674 -0.781340780779818 2.17335911386903 -2.0609439872896 0.674490759476595 0.674490759476595 0.875 -0.907073779985766 -0.767523967680263 0 0.767523967680264 -0.0749999999999995 1.675 -0.0749999999999995 NA 0.470099620241263 1.04239481010019 1.20590772148846 0.96063835440606 1.10371215187079 -0.408782278470664 -1.14459037971786 -1.22634683541199 NA -0.44966050631773 0.0817564556941327 0.245269367082398 0.96063835440606 0.306586708852998 0.44966050631773 -0.654051645553062 0.490538734164796 3.20894088599471 -0.735808101247195 -0.715368987323661 1.22634683541199 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