Bicluster 145 (zzz

GENES 2867:::H37Ra..Youman.media.replicate.2 2867:::H37Rv..Youman.media.replicate.1 2885:::H37Rv..7H9.roll.replicate.3 2885:::Strain.9802826..replicate.1 2885:::Strain.9802826..replicate.2 2885:::Strain.CDC1551..replicate.1 2885:::Strain.M3061a..replicate.4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.3 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.6 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.3 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.3 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.1 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.2 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1 4100:::H37Rv.0.2..Oxygen..2h..5 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1 4101:::H37Rv.Day14.1 4101:::NRP.Day14..4 4107:::pH4.8vspH6.8..4h.B 4107:::pH5.2vspH6.8..10.5h. 4107:::pH5.2vspH6.8..11h. 4107:::X0.05mM.Palmitate.10mM.Gluc..2 4107:::X0.12mg.mL.Nam.pH5.6..2h..1 4107:::X0.12mg.mL.Nam.pH5.6..4h..1 4107:::X0.1mM.GSNO.DMSO..3.5h 4107:::X0.1ug.mL.Mtmvsctrl..0.33h. 4107:::X0.1ug.mL.Mtmvsctrl..0.75h. 4107:::X0.1ug.mL.Mtmvsctrl..1.5h. 4107:::X0.2ug.mL.Mtmvsctrl..0.33h. 4107:::X0.2ug.mL.Mtmvsctrl..0.75h. 4107:::X0.2ug.mL.Mtmvsctrl..1.5h. 4107:::X0.2ug.mL.Mtmvsctrl..6h. 4107:::X0.4mM.NaN3vsDMSO..4h 4107:::X0.4ug.mL.INHvsEtOH..6hA 4107:::X0.5ug.mL..111891vsDMSO.6hA 4107:::X0.5ug.mL..111895vsDMSO..6h 4107:::X0.5ug.mL..121940vsDMSO.6h 4107:::X0.5ug.mL..121940vsDMSO.6hA 4107:::X100uM.Dipyridylvsctrl..6h 4107:::X100uM.DipyridylvsCtrl..6hA 4107:::X10ug.mL..109.DMSO..6h 4107:::X10ug.mL.Amikacin.EtOH..6h 4107:::X10ug.mL.EconazolevsEtOH..6hA 4107:::X12ug.mLEthionamidevsEtOH.6h 4107:::X150uM.Deferroxaminevsctrl..6hB 4107:::X1ug.mL..111891.DMSO..12h..2 4107:::X20ug.mL.Cephalexin.Ctrl..6h..1 4107:::X20ug.mL.Cephalexin.Ctrl..6h..2 4107:::X20ug.mL.CPZvsDMSO..6h 4107:::X20ug.mL.CPZvsDMSO..6h.A 4107:::X25ug.mLCPZ.0.1mMGSNOvsDMSO.A 4107:::X2mMb.mercaptoethanolvsDMSO.6h 4107:::X2ug.mL..111891vsDMSO..6h 4107:::X2ug.mL.SMvsEtOH..6h 4107:::X30ug.mL.RoxvsEtOH..6hA 4107:::X30ug.mLProcept6776vsDMSO.6hA 4107:::X40ug.mL.EtavsEtOH..6h 4107:::X50ug.mLAntimycinAvsDMSO..6hB 4107:::X5ug.mLProcept.6778vsDMSO.6hA 4107:::X5ug.mLStreptomycinvsEtOH.6h 4107:::X60ug.mL.ChlorprovsEtOH..6h 4107:::X6ug.mL.MenadionevsDMSO..6h 4363:::H37Rv.hypoxia.1.day.rep.5 4363:::H37Rv.hypoxia.4hr.rep.4 4363:::H37Rv.hypoxia.7.day.rep.6 4365:::H37Rv.diamide.1h.rep.5 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.1 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.4 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.2 4575:::Extracted.Lung.Surfactant.30min.rep.1 4575:::Extracted.Lung.Surfactant.30min.rep.3 4575:::Whole.Lung.Surfactant.30min.rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media.rep.3 4615:::AA_10uM_2h_T0_01 4615:::AA_30uM_2h_01 4615:::AA_30uM_2h_04 4615:::AA_30uM_2h_08 4615:::Acetate.3mM.2h.01 4615:::Acetate.3mM.2h.04 4615:::Acetate.3mM.30m.01 4615:::Acetate.3mM.30m.03 4615:::Acetate.3mM.60m.02 4615:::CK.AA0.03.2h.02 4615:::CK.for.OA.4h.1 4615:::CK.OA_NA_2H 4615:::ETYA_30uM_10min.05 4615:::ETYA_3uM_1h_02 4615:::L2A_30uM_2h_03 4615:::L2A_30uM_4h_04 4615:::MDG_1254.pMV261.3524_04 4615:::MTB1254_Pellicle_10D_04 4615:::MTB1254_Pellicle_14D_03 4615:::MTB1254_Pellicle_21D_04 4615:::MTB1254.3524.1.T0_WtT0_02 4615:::MTB1254.3524.2._INH_20MIN 4615:::MTB1254.B4.1.Compl._OA_30MIN_02 4615:::MTB1254.B4.1.Compl._OA_30MIN_04 4615:::MTB1254vsMTB1254.0494.4. 4615:::OA_50uM_1h_03 4615:::OA_50uM_2h_01 4615:::OA_50uM_2h_03 4615:::OA_50uM_2h_06 4615:::OA_50uM_2h..0.5.BSA.10mMGlu._30min_01 4615:::OA_50uM_2h.1.5..BSA_30min_01 4615:::OA_50uM_4h_05 4615:::OA_50uM_4h_08 4615:::OA_50uM.0.5.BSA_4h_01 4615:::PA_100uM_2h_03 4615:::PA_10uM_2h_T0_01 4615:::PA_50uM_10min_06 4615:::PA_50uM_12h_01 4615:::PA_50uM_12h_05 4615:::PA_50uM_1h_05 4615:::PA_50uM_1h_11 4615:::PA_50uM_24h_03 4615:::PA_50uM_30min_08 4615:::PA_50uM_3d_03 4615:::PA_50uM_4h_06 4615:::PA_50uM.AA_30uM_2h_01 4615:::PA_50uM.OA_10uM_2h_01 4615:::PA_50uM.OA_10uM_2h_02 4615:::PA_50uM.OA_10uM_30min_01 4615:::PA_50uM.OA_10uM_4h_01 4615:::PA_50uM.OA_10uM_4h_04 4615:::PA_50uM.OA_30uM_4h_05 4615:::Rv_TA_OA30_30mim_01 4615:::Rv.MT106_100503_01 4615:::Rv.MT71_100503_01 4615:::Rv.MT90_100503_01 4615:::Rv.MT90_100503_02 4615:::Rv.MT96_100503_01 4615:::Rv.pMV0481.2. 4615:::Rv.pMV261Km._300uM.PA_10m 4615:::Starvation_1254_12h_01 4615:::Starvation_1254_12h_02 4615:::Starvation_1254_6h_01 4615:::Starvation_1254_PA50.OA30_24h_03 4615:::TBD097 4615:::TBD1267 4615:::TBD425 4615:::TBD426 4615:::TBD817 4615:::TBD819 4615:::TBE060 4615:::Test.G.OA 4615:::Tet_50ng_30M_01 4615:::WM_1254.whiB4._10d_02 4615:::WM_T0_01 4615:::WT_65.4_SDS_01 4615:::WT_85.1_OA_10min_01 4615:::WT_85.1_OA_10min_02 4615:::X2.2..Dipyridyl_0.2mM.Dpd.AA_50uM_01 4615:::X2.BA_100uM_30min_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.1 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.2 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak24hr.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak24hr.rep.2 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak24hr.rep.3 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3 4699:::CDC1551.Ctrl.vs.H37Rv.rep.3 4703:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::H37Rv.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.3 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4799:::H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.2 4815:::H37Rv.reaeration.for.1hrs.rep.3 4815:::H37Rv.reaeration.for.24hrs.rep.2 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.2 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.3 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1 Raghavan_Nature2008:::ESPR..mutant..R...rep3 Raghavan_Nature2008:::espR.mutant.complemented.with.N.terminal.Flag.espR..RFL..rep2 Raghavan_Nature2008:::WT.TB.rep3 Schnappinger_JEM2003:::MTB.in.NOS2.null.macrophages.for.24hrs RV0944 -0.655219594920121 -1.00210055693666 0.367904050623597 -1.01173613921489 -1.25700550629729 -0.122634683541199 -0.429221392394197 -0.505868069607446 -1.43329286388776 0.885269121813031 0.379401052205585 -0.674490759476595 -1.05389181168218 -0.210778362336436 0.29508970727101 -0.29508970727101 -4.97436935113989 -0.0281037816448582 -0.44966050631773 NA 0.0281037816448582 -0.0562075632897163 0.983632357570035 0.309141598093439 0.75880210441117 0.0562075632897162 -0.0562075632897163 0.281037816448581 0.252934034803723 0.351908222335615 -0.746757626563373 0.0481779113911854 -0.457690158216261 0.89932101263546 1.41321873414144 -0.0963558227823708 -0.289067468347112 -0.353304683535359 0.642372151882472 -0.385423291129483 -0.770846582258966 -0.546016329100101 -0.89932101263546 -0.80296518985309 -0.867202405041337 -0.128474430376494 0.546016329100101 NA -1.70228620248855 0.706609367070719 0.289067468347112 0.867202405041337 0.995676835417831 0.578134936694224 -0.353304683535359 1.50957455692381 0.224830253158865 0 -1.50957455692381 -0.0321186075941236 0.481779113911854 0.353304683535359 0.321186075941236 -1.05991405060608 -1.25262569617082 NA -0.513897721505977 0.224830253158865 -1.57381177211206 0.44966050631773 0.256948860752989 -1.54169316451793 0.256948860752989 0.674490759476595 -0.867202405041337 0.546016329100101 NA 0.0749434177196217 0 0.582893248930391 -0.590179414542021 0 NA NA NA 0.557188018698057 -0.23553645569024 0.578134936694224 -0.0214124050627491 1.27189686072729 NA 0.696973784792482 0.0674490759476595 NA 1.14663429111021 0.202347227842979 0.719456810108368 0.292279329106525 0.51710958226539 0.562075632897163 1.34898151895319 -0.269796303790638 1.23656639237376 0.629524708844822 NA -0.224830253158865 -0.247313278474751 -1.34898151895319 -0.224830253158865 -1.34898151895319 1.37146454426908 0.921804037951347 0.404694455685957 0.427177481001844 -0.629524708844822 1.21408336705787 0.44966050631773 2.09092135437744 1.70870992400737 0.044966050631773 1.88857412653447 0.427177481001844 1.28153244300553 -0.112415126579432 NA NA 1.88857412653447 1.48387967084851 0.741939835424255 NA -0.584558658213049 -0.0674490759476594 NA NA 5.19357884796978 -1.3264984936373 -0.314762354422411 -0.427177481001844 -1.86609110121858 0.292279329106525 -0.112415126579432 -1.12415126579433 0.89932101263546 0.359728405054184 -0.0224830253158865 -0.494626556949503 -0.089932101263546 0.247313278474752 0.494626556949503 0.96677008858312 NA -1.39394756958496 -1.37146454426908 -0.786905886056028 0.157381177211206 0.404694455685957 0.157381177211206 0.202347227842979 0.607041683528936 0.539592607581276 0 0.314762354422411 0.629524708844822 0.786905886056028 0.44966050631773 0.404694455685957 0.696973784792482 1.37146454426908 0.786905886056028 NA 0.315446248728598 0.746299661626195 -0.700136795958595 -0.0184791988897697 -0.212510787232352 1.43213791395715 NA -0.434261173909589 -0.540516567525765 -0.0890836852138899 -1.08173046331152 1.05627798182184 -1.13263542629089 -1.56532761161549 -0.470870907559132 -1.08173046331152 -0.318156018621035 -1.81985242651232 0.521775870538498 1.08173046331152 0.531416962011863 1.81908113919445 1.90083759488859 -0.126467017401862 1.02980285598659 0.740735387639475 0.535979264226937 0.367356574357789 -0.403490007901177 -0.945491511052013 0.674490759476595 -0.817171497058183 0.998765163071112 1.66155040749112 0.774415316436091 0.999245569594956 -0.595138905420525 -1.74574078923354 NA -0.674490759476595 -0.16958523147063 0.79898354428357 -0.906753417698563 -0.0445944303786177 2.5 RV0945 -1.375 0.025 2 -1.45 -1.65 0 0.2 1.1414459006527 -2.2137132618719 1.05 0.1 0.15 -0.6 -2.5 -0.75 0.5 -3.1 -1.94852886071016 -0.0374717088598109 0.299773670878487 -0.374717088598108 -1.08667955693451 -0.224830253158865 1.31150981009338 0.524603924037352 1.01173613921489 0.224830253158865 0.674490759476595 0.374717088598108 NA -0.0963558227823708 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