|
[+] Show/hide bicluster #149 rows and columns.
bicluster 149
Mycobacterium tuberculosis H37Rv
7x237
[+] Show/hide bicluster #149 rows (genes).
bicluster 149 genes
Mycobacterium tuberculosis H37Rv
7
[+] Show/hide bicluster #149 rows (short gene names).
bicluster 149 short names
Mycobacterium tuberculosis H37Rv
7
short_name
[+] Show/hide bicluster #149 rows (long gene names).
bicluster 149 long names
Mycobacterium tuberculosis H37Rv
7
long_name
[+] Show/hide bicluster #149 rows (NCBI RefSeq gene IDs).
bicluster 149 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
12
[+] Show/hide bicluster #149 gene upstream sequences.
bicluster 149 upstream sequences
Mycobacterium tuberculosis H37Rv
6
upstream
[+] Show/hide bicluster #149 columns (arrays; conditions).
bicluster 149 arrays
Mycobacterium tuberculosis H37Rv
237
[+] Show/hide bicluster #149 ratios.
bicluster 149 ratios
Mycobacterium tuberculosis H37Rv
7x237
GENES 2867:::H37Ra..7H9.roll.replicate.4 2867:::H37Ra..7H9.shake.replicate.4 2867:::H37Rv..7H9.shake.replicate.4 2885:::Strain.1254...replicate.1 2885:::Strain.1254...replicate.3 2885:::Strain.1843...replicate.3 2885:::Strain.3160...replicate.3 2885:::Strain.3160..replicate.4 2885:::Strain.9700665..replicate.2 2885:::Strain.9802501..replicate.2 2885:::Strain.M3061a..replicate.2 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.2 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.1 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.6 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.1 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.5 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.6 4082:::H37Rv.wild.type.Vs.Rv3676.null.6 4082:::Rv3676.null.Vs.H37Rv.wild.type.6 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2 4099:::H37Rv.hypoxia.2hr.rep.6 4100:::H37Rv.0.2..Oxygen..2h..3 4100:::H37Rv.0.2..Oxygen..2h..5 4101:::NRP.Day10..3 4101:::NRP.Day14..3 4101:::NRP.Day8..1 4107:::H2O2.4mM.vs.ctrl.12h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.2 4107:::pH5.2vspH6.8..10.5h. 4107:::pH5.6vspH6.8..2h. 4107:::pH5.6vspH6.8..4h. 4107:::pH5.6vspH6.8..7h. 4107:::Rif.5ug.mL.vsDMSO.2.5hA 4107:::UV.40J.vs.ctrl.12h.1 4107:::X0.13mg.mL.TLMvsDMSO..6h 4107:::X0.13mg.mL.TLMvsDMSO..6hA 4107:::X0.1mM.GSNOvsDMSO..4h 4107:::X0.2mg.mL.AmpvsEtOH..6h 4107:::X0.2mg.mL.AmpvsEtOH..6hC 4107:::X0.2mg.mL.TLMvsEtOH..6hA 4107:::X0.2mM.NaN3.DMSO 4107:::X0.2ug.mL..111891.DMSO..5.5h..1 4107:::X0.2ug.mL..111891.DMSO..5.5h..2 4107:::X0.2ug.mL.INH.EtOH..6h 4107:::X0.2ug.mL.Mtmvsctrl..0.75h. 4107:::X0.2ug.mL.Mtmvsctrl..4h.A 4107:::X0.2ug.mL.Mtmvsctrl..6h. 4107:::X0.2ug.mL.RifvsDMSO..6h 4107:::X0.4ug.mL.PA824.DMSO..6h..1 4107:::X0.5ug.mL..111895vsDMSO.6h 4107:::X0.5ug.mL.CervsEtOH..6hA 4107:::X100ug.mL.Ceph.DMSO..6h 4107:::X10ug.mL.clotrimvsEtOH..6h 4107:::X10ug.mL.ClotrimvsEtOH..6hA 4107:::X10ug.mL.PA.1vsDMSO..6h 4107:::X10ug.mL.PA.1vsDMSO..6hA 4107:::X10ug.mL.PA.21vsDMSO..6h 4107:::X20ug.mL.Prcp.6776.DMSO..6h..1 4107:::X20ug.mL.Prcp.6778.DMSO..6h..1 4107:::X20ug.mL.Procept.6776vsDMSO..6h 4107:::X20ug.mLProcept6778vsDMSO.6h 4107:::X25ug.mLCPZ.0.1mMGSNO.DMSO..2 4107:::X2ug.mL.SMvsEtOH..6h 4107:::X40mJ.UV.ctrl..6h. 4107:::X40ug.mL.5CL.pH5.6..4h..3 4107:::X4mM.H2O2.ctrl..4h...2 4107:::X4mM.H2O2vsctrl..2h.A 4107:::X50ug.mL.PA.21vsDMSO..6hA 4107:::X50ug.mLAntimycinAvsDMSO..6h 4107:::X60J.UVvsctrl..6h. 4363:::H37Rv.hypoxia.1.day.rep.2 4363:::H37Rv.hypoxia.1.day.rep.3 4363:::H37Rv.hypoxia.12hr.rep.1 4363:::H37Rv.hypoxia.12hr.rep.3 4363:::H37Rv.hypoxia.4.day.rep.1 4363:::H37Rv.hypoxia.4hr.rep.1 4363:::H37Rv.hypoxia.4hr.rep.4 4363:::H37Rv.hypoxia.4hr.rep.7 4363:::H37Rv.hypoxia.7.day.rep.5 4363:::H37Rv.hypoxia.7.day.rep.6 4363:::H37Rv.hypoxia.8hr.rep.1 4363:::H37Rv.hypoxia.8hr.rep.2 4363:::H37Rv.hypoxia.8hr.rep.3 4364:::H37dosR.mutant.hypoxia.12hr.rep.3 4364:::H37dosR.mutant.hypoxia.4hr.rep.2 4364:::H37dosR.mutant.hypoxia.8hr.rep.2 4365:::H37Rv.diamide.1h.rep.2 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.4 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.5 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.4 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.6 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.4 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.5 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep1 4570:::MTB.strain.TB294.SigA.overexpression.va.Ctrl.DS..rep1 4575:::Purified.Surfactant.Lipids.30min.rep.2 4583:::X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1 4583:::X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.2 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1 4583:::X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4583:::X5ug.ml.KCN.vs.DMSO.6hrs.rep.1 4596:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.3 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2hrs..DS..rep.1 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.1 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.2 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages.rep.2 4615:::AA_10uM_10.min_01 4615:::AA_30uM_10.min_04 4615:::AA_30uM_10.min_06 4615:::AA_30uM_1h_04 4615:::AA_30uM_24h_T0_01 4615:::CHP.AA.4h.1 4615:::CHP25uM_24h.50uMOA_30min_01 4615:::CK_LA_2h 4615:::CK_OA_NA_2h.02 4615:::L2A_30uM_10min_06 4615:::L2A_30uM_1h_04 4615:::L2A_30uM_1h_06 4615:::MDGCy3.7H9Cy5.01 4615:::MTB1254_Pellicle_10D_01 4615:::MTB1254_Pellicle_10D_03 4615:::MTB1254_Pellicle_14D_02 4615:::MTB1254_Pellicle_14D_03 4615:::MTB1254.0485.1._OA_10m_02 4615:::MTB1254.Rv0465c.4._PA50.OA30_30m_01 4615:::OA_50uM_10min_05 4615:::OA_50uM_1h_02 4615:::OA_50uM_1h_05 4615:::OA_50uM_2h_09 4615:::OA_50uM_30min_05 4615:::OA_50uM_30min_06 4615:::PA_10uM_10.min_01 4615:::PA_50uM_1h_08 4615:::PA_50uM.AA_30uM_2h_02 4615:::PA_50uM.OA_30uM_4h_02 4615:::Starvation_1254_5d_02 4615:::Starvation_1254_5d_03 4615:::Starvation_1254_6h_08 4615:::Starvation_1254_OA50_5d_03 4615:::Starvation_1254_PA50.OA30_24h_04 4615:::Starvation_1254_PA50.OA30_6h_02 4615:::Starvation_OA50_24h_01 4615:::Starvation_OA50_6h_02 4615:::Starvation_T0 4615:::TBD040 4615:::TBD041 4615:::TBD043 4615:::TBD098 4615:::TBD099 4615:::TBD1114 4615:::TBE733 4615:::TBE734 4615:::Test_361.1 4615:::Test_361.2 4615:::Test_361.3 4615:::WM_T0_01 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3 4638:::CDC1551.wild.type.vs.kstR.null.rep.1 4638:::CDC1551.wild.type.vs.kstR.null.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak24hr.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak24hr.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak24hr.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.4hr.rep.2 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1 4703:::Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant..DS..rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.2 4731:::X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.3 4731:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4731:::X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4731:::X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A 4731:::X5ug.ml.Rifampicin.vs.DMSO.2.5hrs 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.2 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4802:::H37Rv.ctrl.vs.relE1.overexpression.72.hr.rep.3 4802:::H37Rv.ctrl.vs.relE1.overexpression.72.hr.rep.4 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.3 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.1 4815:::H37Rv.reaeration.for.1hrs.rep.2 4815:::H37Rv.reaeration.for.24hrs.rep.3 4815:::H37Rv.reaeration.for.4hrs.rep.3 4815:::H37Rv.reaeration.for.4hrs.rep.4 4815:::H37Rv.reaeration.for.4hrs.rep.7 4815:::H37Rv.reaeration.for.6hrs.rep.1 4815:::H37Rv.reaeration.for.6hrs.rep.2 4860:::M..bovis.nadABC.null.nicotinamide.starvation.rep.1 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.1 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.3 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.5 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2 Raghavan_Nature2008:::espR.mutant.complemented.with.N.terminal.Flag.espR..RFL..rep1 Rohde_CellHostMicrobe2007:::CDC1551.in.ctrl.vs.100.nM.Concanamycin.A.treated.macrophages.for.2.hr Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages...IFNg.for.24hrs
RV1352 -1.77497568283315 0.780989300446584 0.319495622909965 -0.1 -0.1 -0.05 0.4 -0.5 0.9 -0.15 0.25 0.459880063279497 0.0613173417705995 -0.429221392394197 -0.429221392394197 -0.183952025311799 0.0919760126558993 -0.521197405050096 1.13437082275609 0.25 -0.55 0.6 -1.45 -2.35 -0.55 0.55 -0.0518839045751227 -2.68066840304801 -2.33477570588052 2.8882040213485 0.224830253158865 0.847437108060337 -0.397776601742607 -0.432365871459356 -0.397776601742607 -0.12106244400862 0.675 -1.35 -0.15 0.23805556216821 -0.0793518540560699 0.7935185405607 -0.578134936694224 -0.706609367070719 -1.28474430376494 0.160593037970618 -1.25262569617082 -0.289067468347112 -0.224830253158865 -0.385423291129483 -0.417541898723607 0.256948860752989 0.835083797447213 1.12415126579433 0.706609367070719 0.44966050631773 -0.0963558227823707 1.31686291135907 0.89932101263546 1.15626987338845 0.546016329100101 -0.224830253158865 -0.192711645564741 -5.36380746821864 0.481779113911854 0.289067468347112 0.80296518985309 -0.256948860752989 0.224830253158865 0.128474430376494 0.642372151882472 0.128474430376494 1.12415126579433 NA -0.160593037970618 -0.256948860752989 -0.160593037970618 -2.76220025309463 0.770846582258966 -0.706609367070719 -0.192711645564741 -0.128474430376494 -0.963558227823707 1.54169316451793 0.321186075941236 1.57381177211206 -0.183952025311799 0 -0.183952025311799 -1.01173613921489 -2.94323240498878 0.582514746820696 1.50227487337969 -2.91257373410348 0.797125443017794 1.47161620249439 0.306586708852998 0.0919760126558993 -1.90083759488859 0 0.809388911371914 -1.01173613921489 -0.55 0.4 2 NA -1.25 -1.45 0.5 0 0.575 2.58280607897135 -1.29962853655246 1.87893854425623 -0.5290123603738 0.02645061801869 0.23805556216821 -1.08447533876629 -1.98379635140175 0.21160494414952 -0.02645061801869 0.674490759476595 0.250525139234164 -1.1177275442755 -0.0963558227823707 2.04274344298626 -0.616677265807173 -1.05991405060608 0.346880962016535 0.423965620242431 1.1948122025014 0.0337245379738297 -0.539592607581276 1.41643059490085 0.910562525293404 -1.78740051261298 -1.07918521516255 -0.708215297450425 -0.303520841764468 -1.31525698097936 2.52934034803723 1.82112505058681 0.472143531633617 3.06893295561851 0.168622689869149 0.438418993659787 -0.303520841764468 -0.539592607581276 0 -0.809388911371914 -3.03520841764468 0.404694455685957 0.809388911371914 -1.41643059490085 1.45015513287468 1.38270605692702 -0.0337245379738298 0.978011601241063 0.438418993659787 0 1.18035882908404 1.82112505058681 0.809388911371914 2.29326858222042 0.607041683528936 -0.978011601241063 -2.05719681640362 -1.18035882908404 -0.910562525293404 -0.134898151895319 0.809388911371914 0.640766221502765 -0.607041683528936 0.505868069607446 -1.01173613921489 -1.48387967084851 -0.303520841764468 -0.404694455685957 -0.370969917712127 -0.303520841764468 0.0674490759476595 0.0295829280472191 0.585741975334938 -0.759180182191145 0.565604358843602 1.64655097166345 0.707554031999958 0.654652795962578 NA -0.284344143700918 -0.0462885815327076 -0.596061601397921 -0.313716632314695 0.847034907249678 1.1293798763329 0.821652379726034 1.13820315661675 0.548023742074734 -0.0421556724672872 1.01173613921489 0.337245379738298 1.22251450155133 -0.674490759476595 NA NA 0.76706792254201 -0.29095679820559 0.74061730452332 NA NA 0.224830253158865 -0.314762354422411 0.044966050631773 0.584558658213049 -0.292550208929608 -0.227539051389695 NA -0.609635878757692 -0.635577831045253 1.51760420882234 0.609635878757692 -0.134898151895319 2.18950077307018 -0.300926646535712 0.591476512156399 -0.612230073986448 0.321680208365761 1.96121159293964 -0.668097482135585 -1.25827199023631 0.785175305351035 1.70559602774467 -0.500124832713978 -1.63811608344902 0.6175 -0.340125546560396 0.674490759476595
RV1498C -1.87017892400329 0.459880063279497 0.0919760126558993 0.65 0.4 -0.1 -0.55 0.25 1.9 -0.2 0.35 0.112415126579433 -0.599547341756974 0.149886835439243 -0.44966050631773 -0.674490759476595 -0.187358544299054 -0.562075632897163 0.749434177196217 0.159747811454983 -0.567992218506606 0.72774002996159 -0.798739057274915 -1.88147422380313 -1.03582509491049 1.03582509491049 -0.487132215177541 -0.711962468336406 -1.98600056956997 0.0749434177196217 0.786905886056028 -1.76117031641111 1.64875518983168 0.224830253158865 0.637019050616784 -0.374717088598108 0.225 NA NA 0.72266867086778 0.0481779113911853 0.36133433543389 -0.569101578308377 -0.716646431943882 -0.653412923242952 1.11712532038311 -0.0632335087009308 0.105389181168218 -1.91808309726157 -0.337245379738298 1.4965263725887 1.45437070012141 0.421556724672872 1.39113719142048 0.590179414542021 1.4965263725887 -0.8220356131121 0.379401052205585 0.52694590584109 0.864191285579388 0.927424794280318 -0.189700526102792 0.590179414542021 -2.63472952920545 1.3068258464859 0.400478888439228 1.01173613921489 -0.52694590584109 1.05389181168218 0.885269121813031 0.779879940644813 0.590179414542021 1.05389181168218 -2.17101713206529 -0.105389181168218 -0.126467017401862 -0.0421556724672872 NA 0.358323215971941 -0.0632335087009308 -0.337245379738298 -0.29508970727101 -0.29508970727101 1.13820315661675 0.505868069607446 0.0210778362336436 -0.84670116615147 -0.100456070560344 -0.473578618355907 -1.79385840286328 -1.26287631561575 0.674490759476595 0.516631220024626 -1.17677111227831 1.27722718283866 0.746245095591127 0 0.459227751133001 -1.10501677616378 -1.29033014856392 1.0997131947988 -1.23167877817465 -1.15 0 1.5 NA -0.65 -1.15 1.45 0.15 0.691785394334969 0.4 -0.4 0.238882143981294 1.06692174680843 1.01786787339195 0.846179316434274 0.134898151895319 -1.23861030376611 0.846179316434274 -3.2007652404253 0.905744734154285 1.70228620248855 -0.562075632897163 0.0481779113911854 1.46139664553262 -0.369363987332421 -0.738727974664842 0 0.529957025303039 1.86287924045917 -0.786905886056028 -0.711962468336406 0.637019050616784 0.224830253158865 -1.31150981009338 0.224830253158865 -0.0374717088598109 -0.89932101263546 -1.34898151895319 1.64875518983168 0.89932101263546 0.824377594915839 1.34898151895319 -0.749434177196217 -0.524603924037352 -0.412188797457919 -0.44966050631773 -0.0749434177196217 -0.44966050631773 -0.149886835439243 0.674490759476595 1.19909468351395 -0.44966050631773 0.412188797457919 1.7236986075513 -0.0749434177196217 0 0.149886835439243 0.599547341756974 2.73543474676619 3.4473972151026 0.711962468336406 3.85958601256052 1.46139664553262 2.39818936702789 -2.47313278474752 0.936792721495271 -1.19909468351395 -1.27403810123357 1.42392493667281 -0.112415126579433 -1.16162297465414 0.599547341756974 0 -0.936792721495271 -0.224830253158865 0.187358544299054 -0.786905886056028 -0.861849303775649 -0.299773670878487 0.125 -0.225 -0.224830253158865 0.836368541750978 0.07935185405607 0.198379635140175 0.257893525682228 NA 0.436435197308385 0.456273160822403 1.26672654828531 -0.279666900270783 1.29962853655246 0.904804677346652 0.144533734173556 0.477078829873689 0.378372865072236 -0.707392747743746 1.43123648962107 1.16802058348386 0.904804677346652 -2.45119812590275 NA NA 0.212997081939977 -2.41396692865308 0.24849659559664 -1.34898151895319 -0.443743920708286 0.25 -0.45 -0.55 -0.35 -1.11031555790763 -0.778258568626841 NA 0.127920661280044 0.104662359229127 1.05825274331673 0.662861608451137 -0.0554375966693092 2.3838166567803 -0.388063176685164 0.147833591118158 -0.166312790007928 0.0923959944488486 0.813084751149868 -2.0096507464733 -0.879138943751993 2.51731493835413 -0.469842575201197 0.7400293975 -0.0181786125 NA -0.4295 0
RV1707 -0.091456374166318 0.045728187083159 -0.045728187083159 0.404694455685957 0.44966050631773 0.809388911371914 -0.179864202527092 0 0.89932101263546 NA 1.07918521516255 -0.212997081939977 -0.958486868729898 -0.425994163879955 -0.85198832775991 -0.958486868729898 1.06498540969989 -0.177497568283315 1.13598443701321 NA NA NA NA NA -0.809388911371914 0.809388911371914 -0.584558658213049 -3.05769144296057 -0.314762354422411 1.88857412653447 0.809388911371914 -0.494626556949503 -0.134898151895319 -0.224830253158865 1.57381177211206 -0.629524708844822 1.325 -0.625 0.375 0.0143508672229063 0.473578618355907 0.559683821693345 -0.716646431943882 -0.800957776878457 -0.337245379738298 0.632335087009308 -0.674490759476595 -0.421556724672872 -1.26467017401862 -0.463712397140159 0.885269121813031 0.716646431943882 0.252934034803723 0.716646431943882 0.0843113449345744 0.168622689869149 -0.716646431943882 1.55975988128963 1.18035882908404 0.337245379738298 0.716646431943882 0.0843113449345744 1.18035882908404 -4.04694455685957 -0.126467017401862 0.337245379738298 0.379401052205585 -0.379401052205585 0.0843113449345744 0.337245379738298 NA 0.126467017401862 NA -5.48023742074734 -0.843113449345744 -1.09604748414947 -1.01173613921489 NA 1.01173613921489 -0.674490759476595 0 -0.505868069607446 -0.548023742074734 0.252934034803723 NA 0.379401052205585 -0.263931166751711 0.0293256851946346 0 -1.2756673059666 -1.24634162077197 1.17302740778538 1.39297004674514 -1.20235309298002 1.37830720414782 0.674490759476595 -0.0293256851946346 0.175954111167807 -1.37830720414782 -2.12464589235127 0.741939835424255 -2.52934034803723 -0.212997081939977 0.887487841416573 1.66847714186316 0 NA -1.85 0.2 0.4 1.41875642510594 2.525 -0.0249999999999997 0.543096455682453 0.958486868729898 0.816488814103247 0.993986382386561 -0.390494650223292 -1.66847714186316 0.106498540969989 -3.37245379738298 0.311631806593617 1.00746721035745 -1.37459509209787 -1.3319058035234 2.18569157501276 0 -1.57950367725532 0.21344644287234 0.92208863320851 1.26360294180425 -0.262301962018676 -1.0492078480747 0.299773670878487 0.936792721495271 -1.12415126579433 -1.31150981009338 -0.487132215177541 -1.57381177211206 -1.01173613921489 1.16162297465414 0.149886835439244 0.899321012635461 0.86184930377565 0.0374717088598109 0.374717088598109 -0.149886835439243 -0.637019050616784 -0.112415126579432 -0.337245379738298 -2.28577424044846 0.0749434177196218 0.899321012635461 -0.599547341756974 0.786905886056028 0.637019050616784 -0.936792721495271 -0.224830253158865 0.599547341756974 0.41218879745792 4.38418993659787 2.88532158220544 1.42392493667281 3.48486892396241 1.53634006325224 1.19909468351395 0.786905886056028 -1.16162297465414 -0.786905886056028 -1.19909468351395 0.524603924037352 1.27403810123357 -2.54807620246714 0.749434177196217 -0.0374717088598107 -0.224830253158865 -0.524603924037352 -0.936792721495271 -0.262301962018676 -0.974264430355082 -0.0374717088598107 0.2 1.35 -0.981077468329593 0.465166041018341 0.389396727120508 0.33376862324615 NA -3.93568834911085 -0.417210779057688 -1.02911992167563 1.37964018983849 -1.44095753160909 0.582514746820696 0.306586708852998 1.30475261669243 0.805037358084969 2.2628077092118 -0.19581989791256 2.06698781129924 -0.174062131477831 0.565701927302951 -0.630975226607137 -1.06498540969989 0 0.307662451691079 -1.44364688870429 0.828321985322135 -1.08865175213766 -1.13598443701321 0.5 -0.0499999999999998 -0.8 -0.5 -0.115626987338845 0.0770846582258966 NA -0.686535237324391 -0.698579715172188 0.554045980998632 0 0.106498540969989 3.08845768812967 -0.260329766815528 0.544325876068831 -0.804655642884359 0.816488814103247 0.496993191193281 -1.20648347117644 NA NA NA -0.659803272605626 -1.79848483333983 -1.9625 0.346926223102393 -0.25
RV2063C NA NA NA NA NA NA NA NA NA NA NA 0.289067468347112 -0.192711645564741 -0.433601202520668 0.0963558227823708 -0.674490759476595 0.192711645564741 -0.554045980998632 0.385423291129483 NA NA NA NA NA NA NA -0.533971851252305 NA -0.0843113449345744 NA 1.15225504743918 -0.365349161383156 1.85484958856064 0.786905886056028 2.05157606007464 -0.168622689869149 0.5 0 0 0.867202405041337 0.321186075941236 0.0321186075941236 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.637019050616784 0.693226613906501 0.768170031626122 -0.674490759476595 NA NA NA NA 1.53634006325224 NA NA 0 0.0435155328694578 0.0870310657389156 -0.348124262955662 -0.652732993041866 NA -0.217577664347289 NA NA NA NA NA NA NA NA NA NA NA NA -0.117302740778538 NA 0.498536648308788 -0.645165074281961 -1.34898151895319 NA -0.938421926228306 -0.410559592724884 NA 1.7008897412888 1.02639898181221 1.40763288934246 -0.645165074281961 0.234605481557077 -0.527862333503422 0 -0.205279796362442 -0.674490759476595 NA 0.293256851946346 1.29033014856392 -0.791793500255134 0.850444870644403 1.93549522284588 NA 0.527862333503422 0.733142129865864 -0.498536648308788 1.58358700051027 0.967747611422941 0.70381644467123 NA 1.08505035220148 1.40763288934246 -1.90616953765125 -1.34898151895319 -0.410559592724884 -0.733142129865864 1.96482090804052 1.43695857453709 -2.19942638959759 0.586513703892691 -0.821119185449768 -1.43695857453709 -0.791793500255134 -1.11437603739611 -0.32258253714098 -0.205279796362442 0.645165074281961 0.87287039461677 0.71416668650463 -0.555049687485948 0.625309141598093 0.933447033204217 0.0782891060106763 0.451667919292363 -1.36704823572488 -0.391445530053381 -0.572112697770326 0.999009898470052 0.00636312037242071 -0.00636312037242071 1.18990350964267 0.653412923242952 0.708215297450425 NA -0.775664373398084 NA 1.06794370250461 0.674490759476595 -0.978011601241063 NA NA 1.68622689869149 NA 0.711962468336406 0 0 0.05 NA -0.65 -0.7 0.325 -0.225 NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.62845099033908 0.72053052861411 NA NA -0.254088984734334 -0.318261636928877 0.674490759476595
RV2529 -1.64875518983168 0.412188797457919 0.824377594915839 0.0613173417705996 -0.347464936700064 0.674490759476595 -0.715368987323661 -0.470099620241263 0.592734303782463 0.265708481005932 -0.0204391139235332 0.819024493650151 -0.0963558227823707 -2.21618392399453 -0.240889556955927 -0.674490759476595 0.0963558227823707 -0.192711645564741 0.337245379738298 NA NA NA NA NA -1.57859539451969 1.57859539451969 -1.02948589604322 -0.177497568283315 -1.5264790872365 NA 0.993986382386561 -0.319495622909966 1.59747811454983 0.745489786789921 1.02948589604322 -0.390494650223292 0.78327959165024 NA NA 0.594194240491287 0.337245379738298 -0.236301184442481 -0.309141598093439 -0.421556724672872 -1.09604748414947 1.2084626107289 NA 0 -0.309141598093439 -0.477764287962588 0.674490759476595 0.562075632897163 NA 0.871217230990602 0.140518908224291 1.37708530059805 -1.09604748414947 1.32087773730833 1.34898151895319 0.281037816448581 0.562075632897163 -0.590179414542021 0.674490759476595 -1.60191555375691 0.337245379738298 0.168622689869149 0.815009667700886 0.0562075632897163 0.927424794280318 0.590179414542021 0.618283196186879 0.477764287962588 0.674490759476595 -4.24367102837358 -0.252934034803723 0.0281037816448582 -0.112415126579432 NA 0.955528575925176 -0.224830253158865 0.0562075632897163 -0.196726471514007 -0.112415126579432 1.34898151895319 0.730698322766311 1.43329286388776 NA NA NA NA NA NA NA NA NA NA NA NA NA -1.30022315079826 NA -0.820765863941399 NA NA NA NA -0.674490759476595 NA 0.674490759476595 0.374717088598108 0.0465166041018342 NA NA 1.28153244300553 0.206698781129924 0.119667715391009 0.728885175563417 -0.0543944160868222 -1.25107156999691 -0.0543944160868222 -2.03435116164715 0.234006998185758 2.11982810121216 -0.688255877016934 0 NA NA NA NA NA NA 0.0337245379738298 -0.168622689869149 1.28153244300553 0 0.404694455685957 -0.370969917712127 -0.202347227842979 -1.38270605692702 0.0337245379738298 0.607041683528936 0.809388911371914 1.14663429111021 1.38270605692702 -1.31525698097936 NA -1.45015513287468 -0.944287063267233 -0.404694455685957 -0.640766221502766 -2.22581950627276 -0.134898151895319 0.337245379738298 0.101173613921489 0.809388911371914 1.18035882908404 -0.168622689869149 -0.168622689869149 0.809388911371914 1.01173613921489 2.76541211385404 1.85484958856064 1.07918521516255 2.05719681640362 1.41643059490085 1.68622689869149 -2.32699312019425 -0.978011601241063 -2.52934034803723 -0.573317145555106 1.45015513287468 0.809388911371914 -2.93403480372319 0.876837987319574 -0.438418993659787 -0.438418993659787 -0.876837987319574 -1.14663429111021 -0.168622689869149 -0.0337245379738297 0.101173613921489 1.16242024505541 0.373122547795563 -0.832006565581908 0.593713423012332 0.700104332621276 0.563498609182978 0.683028617191489 -3.89326311799149 -0.42689288574468 -1.50266295782128 0.351495184515972 -0.712490238883727 0.465493622737368 1.35848138880497 1.14288712022423 0.661519783332815 0.58369392647013 -0.700432711764156 1.06362004379002 0.882026377777086 0.661519783332815 -0.674490759476595 -0.55 0 0.9790994895628 -0.369882029390391 1.283708219649 -0.282850963651475 -1.41425481825738 0.675 -0.325 -0.825 -1.175 -0.715786112097611 -0.633195406855579 2.52501668932264 -1.31525698097936 -1.33211924996628 0 -0.185484958856064 NA NA NA NA NA NA NA NA -0.731300681710148 1.66130084498173 0.617680837243043 -0.553629118928193 -1.11207761101351 -0.992279674999222 -0.148117620924463 1.25
RV2833C NA NA NA NA -0.0306586708852998 1.19568816452669 -0.889101455673694 0.122634683541199 0.766466772132495 0 0.183952025311799 0.524603924037352 -0.0374717088598109 -1.08667955693451 0.0374717088598108 0.299773670878487 0.374717088598108 -0.487132215177541 0.974264430355082 NA NA NA NA NA -0.554045980998632 0.554045980998632 -0.922987355073235 -1.9169737374598 -1.17148395066988 2.27196887402643 0.354995136566629 -0.958486868729898 1.81047519648981 0.106498540969989 0.887487841416573 -1.06498540969989 0.625 0.533318274934982 0.909778233712617 -0.887487841416573 0.212997081939977 0.177497568283315 -0.39675927028035 -0.31740741622428 -1.15060188381302 0.436435197308385 -1.19027781084105 -0.15870370811214 -1.82509264328961 -0.71416668650463 1.38865744598123 1.15060188381302 NA 0.357083343252315 0.991898175700875 1.19027781084105 NA 0.277731489196245 0.039675927028035 1.30930559192516 0.87287039461677 -0.63481483244856 0.595138905420525 -4.08662048388761 0.7935185405607 -0.277731489196245 -0.357083343252315 -0.23805556216821 0.7935185405607 0.23805556216821 NA -0.198379635140175 NA -3.45180565143905 -1.34898151895319 -0.991898175700875 -0.87287039461677 NA 1.07125002975695 -0.357083343252315 0.198379635140175 -0.357083343252315 -1.38865744598123 0.63481483244856 NA 1.11092595678498 NA NA NA NA NA NA NA NA NA NA NA NA NA -0.993986382386561 -0.319495622909966 -1.9169737374598 -0.2 0.65 1.95 0 NA NA 0.15 1.25 2.02347227842979 NA NA 0.752919917555269 0.843113449345744 0.674490759476595 0.89932101263546 0.196726471514007 -2.55744412968209 0.421556724672872 -2.10778362336436 -0.133783291135854 1.01173613921489 -0.363187332025859 -1.49166225653478 2.12724008758003 -0.259419522875614 -0.181593666012929 NA 0.933910282352209 0.0259419522875614 -0.177497568283314 -0.745489786789921 1.63297762820649 0.496993191193281 -0.85198832775991 -0.993986382386561 0.106498540969989 0.0354995136566629 -1.56197860089317 2.52046546962307 0.319495622909966 1.10048492335655 NA -0.461493677536618 0.319495622909966 -0.141998054626652 -0.674490759476595 -0.141998054626652 -0.0709990273133257 -1.38448103260985 0.567992218506607 1.02948589604322 -0.283996109253303 1.70397665551982 1.63297762820649 -0.390494650223292 1.06498540969989 1.06498540969989 0.709990273133258 2.4849659559664 NA 0.780989300446584 1.70397665551982 0.887487841416573 1.49097957357984 -2.34296790133975 -1.20698346432654 -1.02948589604322 -0.603491732163269 1.56197860089317 1.49097957357984 -2.27196887402643 0.390494650223292 -0.425994163879955 -0.993986382386561 -0.425994163879955 -1.10048492335655 -0.319495622909966 -1.10048492335655 0.496993191193281 0.709080029193344 0.639901489759847 -0.943943810972334 0.528608534144507 1.57381177211206 -0.0432365871459356 NA -2.51636937189345 -0.475602458605291 -0.475602458605291 1.36825268350966 -0.905744734154285 -0.0192711645564741 1.75367597463915 1.55132874679617 0.32901988267151 NA -0.789647718411624 1.92476631362833 0.608686782942293 0.065803976534302 -0.674490759476595 -0.806098712545199 0 0.786905886056028 -1.18035882908404 1.15225504743918 NA NA 0.45 -0.2 -0.85 0.05 NA NA NA -1.13598443701321 -1.15965077945099 0.520659533631056 0.165664397064427 NA NA NA NA NA NA NA NA NA NA 0.33497772 -0.56237652 -0.02233567 -0.705548392045087 -0.222788849633251 0.192711645564742
RV2961 -0.29508970727101 0.0702594541121453 -0.238882143981294 -0.190616953765125 0.571850861295374 0.835782028047085 -1.12903887999343 -0.131965583375856 0.278594009349028 -0.337245379738298 0.366571064932932 0.425994163879955 -0.532492704849944 -0.461493677536618 -0.993986382386561 -0.283996109253303 1.27798249163986 -0.177497568283315 0.0354995136566629 NA NA NA NA NA -0.129709761437807 0.129709761437807 -0.963558227823707 0.0963558227823708 -0.337245379738298 0.529957025303039 0.337245379738298 -0.481779113911854 0.915380316432522 0.578134936694225 0.433601202520668 -1.9752943670386 1.175 -0.674490759476595 0.192711645564741 0.602736423362064 -0.11480693778325 0.459227751133001 -1.51760420882234 -0.573317145555106 -0.809388911371914 0.134898151895319 -0.505868069607446 0.202347227842979 0.168622689869149 -1.07918521516255 0.640766221502765 0.910562525293403 0.775664373398084 0.674490759476595 0.0337245379738297 0.303520841764468 -2.79913665182787 0.674490759476595 0.472143531633617 0.269796303790638 0.337245379738298 -1.51760420882234 0.573317145555106 -1.75367597463915 0.505868069607446 0.370969917712127 0.809388911371914 -0.876837987319574 0.370969917712127 -0.0337245379738297 -0.168622689869149 -0.134898151895319 0.0674490759476595 -1.58505328477 -0.741939835424255 -0.944287063267233 -0.978011601241063 NA -0.303520841764468 -0.809388911371914 -1.21408336705787 -0.978011601241063 -1.51760420882234 0.101173613921489 0.573317145555106 0.303520841764468 NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.177887672828992 NA -0.4 0.6 1.15 NA NA NA NA NA 0.697749061527512 NA NA 0.695085897170537 0.505868069607446 0.775664373398084 0.370969917712127 -0.573317145555106 0.202347227842978 0.370969917712127 -1.04546067718872 NA NA NA NA NA NA NA NA NA NA -0.648548807189034 -1.24521370980294 0.804200520914402 0.907968330064647 -0.726374664051718 NA -0.57072295032635 -1.27115566209051 -1.40086542352831 2.12724008758003 2.23100789673028 0.907968330064647 0.726374664051718 -0.596664902613911 0.441013188888543 -0.907968330064647 -0.518839045751227 -0.18159366601293 -0.596664902613911 -0.804200520914402 0.674490759476595 1.19332980522782 -0.233477570588052 0.441013188888543 0.441013188888543 -0.622606854901472 1.45274932810344 0.933910282352209 0.38912928431342 3.21680208365761 2.2828918013054 1.08956199607758 3.50216355882078 1.21927175751538 1.68622689869149 -3.45027965424566 NA 0.311303427450736 -0.882026377777086 1.16738785294026 1.37492347124075 -2.93144060849443 0.856084425489525 -0.466955141176104 -0.363187332025859 -1.01173613921489 -0.648548807189034 -1.78999470784173 0.0518839045751227 0.544780998038788 0.685987761058583 0.0498203401886121 -0.774662654448367 0.623291790935467 1.03308078350213 0.221984300587234 0.136605723438298 -2.17715371729787 NA -0.870861486919148 1.75492503160114 -0.843113449345744 -0.0936792721495272 0.618283196186879 1.71598384396251 1.31409406587681 0 -0.407020285891049 0.848928024858473 0.500053494094717 0.790782269731181 -1.03499444126581 0.1 0 0.134898151895319 -0.0674490759476595 -0.236071765816808 NA NA 0.4 -1.25 0.1 -0.95 -1.44533734173556 0.409512246825076 NA -1.53634006325224 -1.55507591768215 0.768170031626122 0.168622689869149 -0.657415044046808 2.8089551882 -0.110992150293617 0.623263613187233 -0.264673589161702 NA 2.07469942471915 NA NA NA 1.22757208291256 -0.467923312585858 NA -0.718962677683843 -0.221294680914766 0.5
[+] Show/hide bicluster #149 motif PSSM #1. bicluster 149 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0 0 1 0
2 0 0 0 1
3 0.25 0.5 0 0.25
4 0 1 0 0
5 0.75 0 0 0.25
6 0 0 1 0
7 0 0.75 0.25 0
8 0 0.5 0.25 0.25
9 0 0.25 0.75 0
10 0.5 0 0.25 0.25
11 0 1 0 0
12 0 0 1 0
13 0 0 1 0
14 0 0 0 1
15 0 0 1 0 [+] Show/hide bicluster #149 motif PSSM #2. bicluster 149 motif PSSM #2 Mycobacterium tuberculosis H37Rv 6x4
POSITION A C G T
1 1 0 0 0
2 0 1 0 0
3 0 0 1 0
4 1 0 0 0
5 1 0 0 0
6 0 0 0 1 |