Bicluster 150 (zzz

GENES 2867:::H37Ra..Sauton.s.media.replicate.4 2885:::H37Rv..7H9.roll.replicate.1 2885:::H37Rv..7H9.roll.replicate.2 2885:::Strain.9800608..replicate.1 2885:::Strain.9802826..replicate.1 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.3 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.5 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.2 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.3 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.4 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.2 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs...0.5.mM.DNO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.1 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.1 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.1 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.2 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.3 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.4 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.6 4082:::H37Rv.wild.type.Vs.Rv3676.null.6 4082:::Rv3676.null.Vs.H37Rv.wild.type.6 4084:::High.iron.wt.vs.high.iron.ideR.Complement.1a 4084:::High.iron.wt.vs.high.iron.ideR.KO.2b 4084:::High.iron.wt.vs.low.iron.wt.1a 4084:::High.iron.wt.vs.low.iron.wt.3a 4084:::High.iron.wt.vs.low.iron.wt.3b 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3 4089:::MTB1254.vs..MTB1254.rep4 4089:::MTB1254.vs..MTB1254.rep6 4099:::H37Rv.hypoxia.2hr.rep.4 4100:::H37Rv.0.2..Oxygen..2h..2 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3 4107:::EMB..10ug.mL..DMSO..12h 4107:::EMB.10ug.mL.vs.DMSO.12h.2 4107:::EMB.10ug.mL.vs.DMSO.12h.3 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.1 4107:::pH4.8vspH6.8..5h. 4107:::X.241..1ug.mL..DMSO..12h..1 4107:::X0.13mg.mL.TLMvsDMSO..6h 4107:::X0.1mg.mLTriclosanvsEtOH.6hB 4107:::X0.1mM.GSNO.DMSO..3.5h 4107:::X0.1mM.GSNOvsDMSO..6h 4107:::X0.2ug.mL.RifvsDMSO..6hA 4107:::X0.5ug.mL..111891vsDMSO.6h 4107:::X0.5ug.mL..111895vsDMSO..6h 4107:::X0.5ug.mL..124196vsDMSO..6hA 4107:::X10ug.mLchlorpromazinevsctrl.6hA 4107:::X24ug.mL.cltrmazole.DMS..6h..1 4107:::X2ug.mL..111895vsDMSO..6hB 4107:::X2ug.mL.SMvsEtOH..6h 4107:::X40ug.mL.EtavsEtOH..6h 4107:::X4mM.H2O2.ctrl..4h...1 4107:::X4mM.H2O2vsctrl..2h.A 4107:::X50ug.mL.VerapamilvsDMSO..6h 4107:::X50ug.mLAntimycinAvsDMSO..6h 4107:::X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2 4107:::X5ug.mL.TetvsEtOH..6h 4363:::H37Rv.hypoxia.12hr.rep.2 4363:::H37Rv.hypoxia.4hr.rep.6 4363:::H37Rv.hypoxia.4hr.rep.7 4364:::H37dosR.mutant.hypoxia.4.day.rep.1 4365:::H37Rv.diamide.1h.rep.4 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4396:::Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.2 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.6 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5 4575:::Extracted.Lung.Surfactant.2hrs.rep.2 4575:::Extracted.Lung.Surfactant.30min.rep.1 4575:::Whole.Lung.Surfactant.2hrs.rep.3 4575:::Whole.Lung.Surfactant.30min.rep.1 4575:::Whole.Lung.Surfactant.30min.rep.5 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.1 4615:::AA_30uM_10.min_05 4615:::AA_30uM_1h_01 4615:::AA_30uM_1h_03 4615:::AA_30uM_24.AA_30uM_1h_01 4615:::AA_30uM_30min_03 4615:::Acetate.3mM.10m_04 4615:::Acetate.3mM.30m.04 4615:::Acetate.3mM.60m.02 4615:::CK.AA.Na.2h 4615:::CK.for.MDG.24h.PA.NA 4615:::CK.for.MDG.OA.4h 4615:::CK.for.MDG.OA.Na.24h 4615:::CK.for.OA.4h.1 4615:::CK.PA.NA.2h.02..100901 4615:::CK.PA.NA.2h.3..101801 4615:::ETYA_3uM_1h_02 4615:::ETYA_3uM.AA_1h_02 4615:::L2A_30uM_1h_09 4615:::L2A_30uM_30Min_06 4615:::L2A_30uM_4h_07 4615:::MTB1254_Pellicle_14D_02 4615:::MTB1254_Pellicle_21D_01 4615:::MTB1254_Pellicle_21D_04 4615:::MTB1254_Pellicle_42D_03 4615:::MTB1254.0485.1._OA_10m_02 4615:::MTB1254.0485.1._PA_10m_01 4615:::MTB1254.0485.1._PA_12h_01 4615:::MTB1254.0485.1._PA_12h_03 4615:::MTB1254.0485.1._PA_30m_03 4615:::MTB1254.0485.1._PA_30m_04 4615:::MTB1254.3524.1._OA_10min_01 4615:::MTB1254.3524.1._OA_10min_03 4615:::MTB1254.3524.1._PA_12h_01 4615:::MTB1254.3524.2._INH_20MIN 4615:::MTB1254.Rv3524.2._PA50.OA30_2h_01 4615:::OA_50uM_10min_03 4615:::OA_50uM_1h_02 4615:::OA_50uM_1h_03 4615:::OA_50uM_1h_04 4615:::OA_50uM_1h_05 4615:::OA_50uM_24h_02 4615:::OA_50uM_2h_01 4615:::OA_50uM_2h_03 4615:::OA_50uM_2h_06 4615:::OA_50uM_2h..0.5.BSA.10mMGlu._30min_01 4615:::OA_50uM_2h..1.0..BSA.10mMGlu._30.min._01 4615:::OA_50uM_30min_03 4615:::OA_50uM_30min_05 4615:::OA_50uM_4h_02 4615:::OA_50uM_4h_09 4615:::PA_100uM_2h_T0_01 4615:::PA_10uM_10min_02 4615:::PA_5.uM_10min_02 4615:::PA_50uM_10.min_02 4615:::PA_50uM_12h_02 4615:::PA_50uM_24h_09 4615:::PA_50uM_30.min_04 4615:::PA_50uM_3d_01 4615:::PA_50uM_3d_03 4615:::PA_50uM_4h_01 4615:::PA_50uM_4h_05 4615:::PA_50uM.AA_30uM_30min_02 4615:::PA_50uM.OA_10uM_12h_02 4615:::PA_50uM.OA_10uM_2h_01 4615:::PA_50uM.OA_10uM_2h_02 4615:::PA_50uM.OA_30uM_2h_02 4615:::PA_50uM.OA_30uM_4h_03 4615:::PA_50uM.OA_30uM_4h_05 4615:::Rv.MT90_100603_01 4615:::Rv.MT90_100903_01 4615:::Rv.pMV0481.2. 4615:::Starvation_1254_12h_02 4615:::Starvation_1254_12h_04 4615:::Starvation_1254_6h_01 4615:::TBD043 4615:::TBD091 4615:::TBD097 4615:::TBD426 4615:::TBD664 4615:::TBE057 4615:::TBE733 4615:::Test_ceramide_5uM 4615:::Test.G.OA 4615:::Tet_500ng_30M_01 4615:::WM_1254.whiB4._10d_02 4615:::X2.BA_500uM_30min_01 4615:::X2.BA.1 4615:::X7H9_PA_300uM_4h_T0_01 4615:::X7H9_PA_50uM_4h_T0_02 4615:::X7H9MTB1254.0465.4._SDS_90MIN_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.2 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.3 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.4hr.rep.2 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1 4699:::CDC1551.Ctrl.vs.H37Rv.rep.1 4703:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.2 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.3 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.3 4815:::H37Rv.reaeration.for.1hrs.rep.8 4815:::H37Rv.reaeration.for.4hrs.rep.6 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.3 Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.24hrs RV0112 -0.222512415497433 -0.202347227842978 0.370969917712128 2.86658572777553 0.202347227842979 -0.404694455685957 0.884332329091536 -0.313156424042705 0.192711645564742 0.385423291129483 0.0722668670867781 0.144533734173556 -1.01173613921489 NA -0.674490759476595 -2.07165018982097 -1.49351525312675 0.529957025303039 0.433601202520668 NA NA NA NA NA NA NA NA 2.02347227842979 -1.32400037971332 -0.0249811392398739 0.0749434177196216 -0.674490759476595 3.99369528637458 0.195247325111646 1.93472349428813 0.301745866081635 0.159747811454983 -2.225 -2.1 0 -0.435155328694578 -0.261093197216747 0.870310657389155 -0.217577664347289 0.565701927302951 -0.0652732993041866 0.543944160868222 -0.108788832173644 -1.06613055530172 -2.87202516938421 -1.47952811756156 0.304608730086204 0.304608730086204 0.282850963651475 0.369882029390391 NA 0.239335430782018 -0.39163979582512 -1.10964608817117 0.0435155328694578 1.04437278886699 -3.02432953442731 0.718006292346053 -1.54480141686575 1.17491938747536 0.812454778460444 -0.710259208842778 -0.393452943028014 0.751575417702492 0.674490759476595 NA NA -1.2 -0.7 1.25 0.05 0.690550063273657 0.594194240491286 0.385423291129483 -1.27189686072729 0.501050278468328 0.770846582258966 0.0578134936694225 -0.846179316434274 0.68348396960295 0.377714825306893 2.32324594930827 0.699471898716469 1.02422670883483 0.5745662025171 1.0492078480747 0.774415316436091 0.0999245569594956 0.424679367077856 -0.374717088598108 -0.224830253158865 0.274792531638613 -0.44966050631773 -0.349735949358234 -1.34898151895319 -1.0492078480747 2.07343455690953 0.599547341756973 0.224830253158865 0.5745662025171 -0.424679367077856 -0.174867974679117 -0.949283291115208 -0.199849113918991 -2.17335911386903 0.199849113918991 -0.824377594915839 -0.499622784797478 0.249811392398739 -0.349735949358234 -1.09917012655445 -0.349735949358234 -1.34898151895319 1.94852886071016 -0.349735949358234 0.224830253158865 -1.17411354427407 1.6237740505918 0.524603924037352 2.1983402531089 3.79713316446083 -1.74867974679117 1.09917012655445 1.37396265819306 0.924302151875334 -0.799396455675965 -0.824377594915839 0.349735949358235 3.52234063282222 0.849358734155712 0.0749434177196217 0.699471898716469 -0.999245569594956 -0.0999245569594956 0.774415316436091 0.0249811392398739 0.674490759476595 -1.84860430375067 -0.499622784797478 -0.524603924037352 3.02271784802474 2.2982648100684 0.0499622784797478 -0.44966050631773 1.22407582275382 0.749434177196217 0.849358734155712 0.5745662025171 1.37396265819306 0.349735949358235 0.374717088598108 -0.5745662025171 NA -1.47388721515256 -1.92354772147029 -0.274792531638613 -0.474641645557604 0.524603924037352 -0.174867974679117 0.724453037956343 -1.07418898731458 -1.17411354427407 0.399698227837982 NA -0.124905696199369 0.974264430355082 -0.474641645557604 1.02422670883483 0.44966050631773 0.924302151875334 -1.19909468351395 1.25262569617082 0.0115626987338845 -1.52589712799623 3.96954397790324 -0.574975729389885 -0.475460699303174 -2.18933066190764 -1.05141206624293 0.257893525682228 1.2497917013831 0.039675927028035 -0.753842613532665 0.87287039461677 -2.40039358519612 0.15870370811214 0.376921306766333 0.15870370811214 0.826488677105124 -0.959486855030086 1.6244777446549 -0.503493102144501 -0.674490759476595 -0.959486855030086 -0.883487896215822 1.38270605692702 -0.708215297450425 -0.674490759476595 -1.38270605692702 NA NA NA -0.459880063279497 NA NA NA NA -0.328918333325006 -0.137396265819306 NA -0.674490759476595 RV0113 0.436435197308385 0.23125397467769 -0.655219594920121 2.62087837968048 0.847931240484863 -0.31740741622428 1.11092595678498 -0.485633346823149 0.269796303790638 -0.107918521516255 -0.485633346823149 -0.242816673411574 0.647511129097532 0.620531498718468 0.188857412653447 0.620531498718468 -0.91730743288817 2.37420747335762 0.620531498718468 NA NA NA NA NA NA -0.674490759476595 0.674490759476595 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