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[+] Show/hide bicluster #161 rows and columns.
bicluster 161
Mycobacterium tuberculosis H37Rv
18x215
[+] Show/hide bicluster #161 rows (genes).
bicluster 161 genes
Mycobacterium tuberculosis H37Rv
18
[+] Show/hide bicluster #161 rows (short gene names).
bicluster 161 short names
Mycobacterium tuberculosis H37Rv
18
short_name
[+] Show/hide bicluster #161 rows (long gene names).
bicluster 161 long names
Mycobacterium tuberculosis H37Rv
18
long_name
[+] Show/hide bicluster #161 rows (NCBI RefSeq gene IDs).
bicluster 161 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
34
[+] Show/hide bicluster #161 gene upstream sequences.
bicluster 161 upstream sequences
Mycobacterium tuberculosis H37Rv
18
upstream
[+] Show/hide bicluster #161 columns (arrays; conditions).
bicluster 161 arrays
Mycobacterium tuberculosis H37Rv
215
[+] Show/hide bicluster #161 ratios.
bicluster 161 ratios
Mycobacterium tuberculosis H37Rv
18x215
GENES 2867:::H37Rv..Sauton.s.media.replicate.1 2867:::H37Rv..Sauton.s.media.replicate.4 2867:::H37Rv..Youman.media.replicate.4 2885:::Strain.9802826..replicate.1 2885:::Strain.9802826..replicate.3 2885:::Strain.M3061a..replicate.2 2885:::Strain.M3061a..replicate.4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.6 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs...0.5.mM.DNO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.3 4082:::H37Rv.wild.type.Vs.Rv3676.null.6 4082:::Rv3676.null.Vs.H37Rv.wild.type.6 4084:::High.iron.wt.vs.high.iron.ideR.Complement.1a 4084:::High.iron.wt.vs.low.iron.wt.3b 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.3 4099:::H37Rv.hypoxia.2hr.rep.4 4101:::NRP.Day12..1 4107:::DIPED.5ug.mL.vs.DMSO.12h.1 4107:::X.241..1ug.mL..DMSO..12h..1 4107:::X0.12mg.mL.BZAvspH5.6..11h. 4107:::X0.12mg.mL.BZAvspH5.6..5h. 4107:::X0.12mg.mL.NamvspH5.6..4h. 4107:::X0.12mg.mL.PZA.pH5.6..5h. 4107:::X0.12mg.mL.PZAvspH5.6..6h. 4107:::X0.12mg.mL.PZAvspH5.6..6h.A 4107:::X0.1mg.mL.TriclosanvsEtOH..6h 4107:::X0.1mg.mL.TriclosanvsEtOH..6hA 4107:::X0.1mM.GSNOvsDMSO..6h 4107:::X0.1ug.mL.Mtmvsctrl..1.5h. 4107:::X0.2mg.mL.AmpvsEtOH..6h 4107:::X0.2ug.mL..111891.DMSO..5.5h..3 4107:::X0.2ug.mL.Mtm.ctrl..4h...1 4107:::X0.2ug.mL.Mtmvsctrl..0.75h. 4107:::X0.2ug.mL.Mtmvsctrl..2h.A 4107:::X0.2ug.mL.Mtmvsctrl..6h. 4107:::X0.2ug.mL.RifvsDMSO..6hA 4107:::X0.4ug.mL.INHvsEtOH..6hA 4107:::X0.5mM.DNP.DMSO..6h 4107:::X0.5ug.mL..121940vsDMSO.6h 4107:::X0.5ug.mL..121940vsDMSO.6hA 4107:::X0.5ug.mL..124196vsDMSO..6hA 4107:::X0.5ug.mL.CervsEtOH..6h 4107:::X1.2mg.mL.PZAvspH5.6..4h. 4107:::X10ug.mL..109vsDMSO..6hA 4107:::X10ug.mL..59vsDMSO..6h 4107:::X10ug.mL.clofazimine.DMSO..6h 4107:::X10ug.mL.methoxatinvsDMSO..6h.A 4107:::X10ug.mL.Nvb.DMSO..6h..2 4107:::X10ug.mL.Nvb.DMSO..6h..3 4107:::X10ug.mL.OfloxvsDMSO..6h 4107:::X10ug.mL.TRZ.DMSO..6h..2 4107:::X10ug.mLchlorpromazinevsctrl.6h 4107:::X130ug.mL.TLMvsDMSO..6h 4107:::X130ug.mL.TLMvsDMSO..6hA 4107:::X1mM.DTNBvsDMSO..6h 4107:::X1ug.mL..111891.DMSO..12h..2 4107:::X1ug.mL..124196vsDMSO..6h 4107:::X1ug.mL..59vsDMSO..6h 4107:::X1uM.ValinomycinvsDMSO..6h.A 4107:::X1uM.ValinomycinvsDMSO..6h.B 4107:::X200uM.Dipyridylvsctrl..6h 4107:::X20ug.mL.chlorprmz.DMSO..6h..2 4107:::X20ug.mL.KCN.DMSO..6h 4107:::X20ug.mL.Prcp.6778.DMSO..6h..1 4107:::X20ug.mLProcept6778vsDMSO.6hA 4107:::X20uM.DCCD.DMSO..6h..1 4107:::X25J.UV.ctrl..2h. 4107:::X2mMb.mercaptoethanolvsDMSO.6h 4107:::X2ug.mL..111891vsDMSO..6h 4107:::X2ug.mL..111895vsDMSO..6h 4107:::X2ug.mL.SMvsEtOH..6hA 4107:::X4d.Dubos.NRP.1vsDubos.aero.A 4107:::X4mM.H2O2.ctrl..2h...2 4107:::X50ug.mL.PA.21vsDMSO..6h 4107:::X50ug.mL.VerapamilvsDMSO..6h 4107:::X50ug.mLAntimycinAvsDMSO..6h 4107:::X50uM.CCCP.DMSO..6h..2 4107:::X5ug.mL.AmivsEtOH..6h 4107:::X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1 4107:::X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2 4107:::X5ug.mL.KCN.DMSO..6h..1 4107:::X5ug.mLCFZ.0.1mMGSNOvsDMSO.A 4107:::X5ug.mLProcept.6778vsDMSO.6hA 4107:::X6ug.mL.MenadionevsDMSO..6h 4363:::H37Rv.hypoxia.1.day.rep.5 4363:::H37Rv.hypoxia.4hr.rep.7 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3 4396:::Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.4 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.1 4575:::Extracted.Lung.Surfactant.2hrs.rep.2 4575:::Extracted.Lung.Surfactant.30min.rep.1 4575:::Purified.Human.SP.A.Coated.2hrs.rep2 4575:::Purified.Surfactant.Lipids.30min.rep.1 4575:::Whole.Lung.Surfactant.2hrs.rep.3 4581:::H37Rv.Ctrl.vs.5.ug.ml.garlic.extract.6hrs 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.3 4615:::AA_30uM_10.min_05 4615:::AA_30uM_10m_01 4615:::AA_30uM_1h_01 4615:::AA_30uM_24h_03 4615:::AA_30uM_2h_07 4615:::Acetate.3mM.30m.01 4615:::Acetate.3mM.30m.03 4615:::CHP.AA.2h.1 4615:::CHP.AA.4h.1 4615:::CK.for.MDG.OA.Na.24h 4615:::CK.MDG.2h.for.PA.NA.2 4615:::Glucose_5mM_10min_01 4615:::L2A_30uM_1h_02 4615:::LAA_50uM_10min_02 4615:::MDA_1254.pMV261_01 4615:::MDA_1254.pMV261.3524_03 4615:::MDG_1254.pMV261_01 4615:::MDGCy3.7H9Cy5.02 4615:::MTB1254_Pellicle_14D_01 4615:::MTB1254.0465.4._SDS_60MIN_01 4615:::MTB1254.0485.1._OA_10m_02 4615:::MTB1254.0485.1._OA_10m_03 4615:::MTB1254.0485.1._PA_10m_01 4615:::MTB1254.0485.1._PA_4h_01 4615:::MTB1254.3219.3._01 4615:::MTB1254.3524.1._PA_12h_02 4615:::MTB1254.3524.1._PA_12h_04 4615:::MTB1254.3524.2._INH_20MIN 4615:::MTB1254.B4.1._OA_30MIN_02 4615:::MTB1254.B4.1.Compl._PA_30MIN_02 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_02 4615:::MTB6548_PA50_1h_02 4615:::OA_50uM_24h_06 4615:::OA_50uM_2h..1.0..BSA.10mMGlu._30.min._01 4615:::PA_100uM_2h_T0_01 4615:::PA_50uM_10min_04 4615:::PA_50uM_10min_06 4615:::PA_50uM_10min_10 4615:::PA_50uM_1h_08 4615:::PA_50uM_1h_11 4615:::PA_50uM_24h_03 4615:::PA_50uM_4h_02 4615:::PA_50uM.OA_10uM_2h_04 4615:::PA_50uM.OA_10uM_4h_03 4615:::PA_50uM.OA_10uM_4h_04 4615:::Rv_OA_10min 4615:::Rv_TA_OA30_30mim_01 4615:::Rv.p0485.1. 4615:::Rv.p0485.1._OK 4615:::Rv.pMV261Km._300uM.PA_10m 4615:::Spe_100uM_30M_01 4615:::TBD040 4615:::TBD041 4615:::TBD097 4615:::TBD1267 4615:::TBD425 4615:::TBD426 4615:::TBD817 4615:::TBD819 4615:::TBE057 4615:::TBE733 4615:::Test_ceramide_5uM 4615:::X2.BA_100uM_30min_01 4615:::X2.BA_500uM_30min_01 4615:::X7H9_MTB1254.3524.1._OA100_10M_01 4615:::X7H9Cy3.MDGCy5.02 4615:::X7H9MTB1254.0465.4._SDS_90MIN_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3 4703:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::H37Rv.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.3 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2 4802:::H37Rv.ctrl.vs.relE1.overexpression.24.hr.rep.1 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.1 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.2 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.4 4802:::H37Rv.ctrl.vs.relE3.overexpression.24.hr.rep.2 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.3 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.2 4815:::H37Rv.reaeration.for.1hrs.rep.1 4815:::H37Rv.reaeration.for.4hrs.rep.4 4815:::H37Rv.reaeration.for.6hrs.rep.4 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.2 Raghavan_Nature2008:::Complemented.espR.mutant..R...rep3
RV0007 0.824377594915839 0.149886835439243 -1.23656639237376 -0.674490759476595 -0.809388911371914 1.07918521516255 -0.782409280992851 -4.32467604605582 1.50768522706533 0.63481483244856 -0.7935185405607 -2.06314820545782 0.912546321644805 NA NA NA NA NA -1.46628425973173 -0.850444870644403 NA 1.05572466700684 0.293256851946346 NA 0 1.23167877817465 0.615839389087326 -0.75 -0.369882029390391 1.57381177211206 1.73440481008267 1.54169316451793 -0.160593037970618 -1.05991405060608 0.0963558227823707 -0.642372151882472 1.02779544301195 0.995676835417831 1.44533734173556 -1.31686291135907 -0.321186075941236 -0.160593037970618 -0.0321186075941236 -2.1840653164004 0.867202405041337 -0.578134936694225 0.0642372151882471 2.24830253158865 1.18838848098257 -0.642372151882472 -0.289067468347112 -0.0642372151882472 0.128474430376494 0.706609367070719 2.1840653164004 0.385423291129483 NA 0 -1.31686291135907 3.08338632903586 2.89067468347112 0.0321186075941235 0.353304683535359 -0.417541898723607 0.224830253158865 0 -1.44533734173556 NA -0.289067468347112 NA -2.47313278474752 -5.49228189859513 -0.995676835417831 1.0920326582002 NA -0.321186075941236 0.385423291129483 NA 0.160593037970618 -1.25262569617082 -0.289067468347112 -0.770846582258966 0 -6.45584012641884 0.963558227823707 -0.289067468347112 -0.44966050631773 -0.770846582258966 NA 0.0321186075941235 -0.353304683535359 -0.321186075941236 -4.4966050631773 -1.18838848098257 0.706609367070719 -5.5886377213775 -1.1480693778325 0.11480693778325 -1.13820315661675 -1.26467017401862 0.632335087009308 NA 0.15 0.65 0.643832088591295 -1.77820291134739 2.48335234170928 -1.68622689869149 0.674490759476595 1.07483366187561 -1.04761330727216 0.947157236711815 1.47813932395935 1.46527302920778 -0.441907738967424 -0.139549812305502 1.06988189434219 0.790782269731181 0.16280811435642 0.441907738967424 0.16280811435642 -0.0465166041018341 0.0697749061527513 NA -0.651232457425678 -0.209324718458254 -1.6280811435642 2.25605529893896 1.81414755997153 1.97695567432795 0.883815477934849 0.767523967680264 -0.651232457425678 0.16280811435642 -0.837298873833015 0.186066416407337 -1.7676309558697 0.16280811435642 -1.16291510254585 -1.7676309558697 0.302357926661922 -0.325616228712839 -0.418649436916507 -1.16291510254585 -1.67459774766603 0.581457551272927 0.534940947171093 -1.67459774766603 0.790782269731181 -0.116291510254585 -1.79088925792061 -0.0232583020509171 -0.325616228712839 1.11639849844402 -0.744265665629346 -0.0930332082036683 0.744265665629346 0.302357926661922 -2.1862803927862 0.0697749061527513 0.651232457425678 0.651232457425678 0.627974155374761 -0.348874530763756 0.465166041018342 0.9535903840876 -0.0697749061527512 0.39539113486559 0.488424343069259 0.348874530763756 -0.721007363578429 0.488424343069259 -0.0697749061527512 0.907073779985766 0.604715853323844 -1.65133944561511 0.0697749061527513 -0.209324718458254 1.02336529024035 0.697749061527512 1.00435120389216 0.762467815060499 0.0146628425973173 1.34898151895319 -0.691785394334969 0.795553203485215 0.415071236600982 0.760963933768466 0.345892697167485 0.458653716444085 1.69971671388102 -0.0269796303790638 -0.21583704303251 -0.458653716444085 0.423517453624839 -0.0470574948472043 0 -0.75 -0.242395116686902 -2.56463346917264 -0.90193531790475 1.35682443476106 0.682333675284463 -0.50978952751138 0.635276180437259 1.24702361345092 -0.0549004106550716 1.85877104646457 -0.97623662555823 NA -0.727740029961589 NA 1.4225
RV0339C NA -0.590179414542021 -0.623903952515851 0.949793110283369 0.123886057863048 0.784611699799305 0.784611699799305 0 0.993986382386561 -0.674490759476595 0.638991245819932 NA 1.63297762820649 NA -3.21916044295648 3.21916044295648 1.51760420882234 -0.632335087009308 -0.699471898716469 -0.44966050631773 -0.774415316436091 0.0249811392398739 0 0.599547341756973 -0.0249811392398739 0.12490569619937 -0.199849113918991 0.125000000000001 -0.774415316436091 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.463712397140159 0.126467017401861 NA NA 0.875 -0.225 0.0195504567964231 -0.469210963114153 3.28447674179907 -1.79864202527092 -0.19550456796423 -0.545543996635481 -1.05991405060608 0.289067468347112 1.98492994931684 2.8328611898017 0.0809388911371914 -0.242816673411574 -0.0539592607581277 NA 2.50910562525293 0.809388911371914 -1.61877782274383 -0.539592607581276 -1.45690004046945 NA 0.701470389855659 -0.161877782274383 0.0809388911371914 0.593551868339404 0.377714825306893 1.53783893160664 2.34722784297855 1.48387967084851 -0.215837043032511 -0.458653716444085 -1.07918521516255 -0.701470389855659 -1.24106299743694 0.809388911371914 -0.647511129097531 -1.96951301767166 0.188857412653447 -1.45690004046945 -1.8615944961554 0.35073519492783 NA 0.161877782274383 0.944287063267233 NA 2.96775934169702 1.07918521516255 NA NA -4.31674086065021 0.512612977202212 -0.377714825306893 -1.99649264805072 -0.458653716444085 -0.620531498718468 -1.72669634426008 -0.107918521516255 0.755429650613787 0.755429650613787 1.24106299743694 -0.701470389855659 0.0809388911371914 0.485633346823149 -0.35073519492783 0.512612977202212 0.728450020234723 0.269796303790638 0.620531498718468 1.16012410629974 0.755429650613787 0.485633346823149 1.16012410629974 -2.91380008093889 -1.13314447592068 -0.188857412653447 NA -0.971266693646297 1.11519388519039 -0.044966050631773 -0.831871936687801 1.92127670881212 -2.28918075943572 1.06283392402373 0.0817564556941328 -0.735808101247195 -0.367904050623597 -0.411553683748431 0.137184561249477 -0.205776841874215 -0.685922806247385 -0.800243273955282 0.240889556955927 -1.65410829109736 NA NA -0.622606854901472 NA NA NA NA NA NA NA NA NA NA NA NA NA -0.0907571664127528
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RV1754C -0.927424794280319 -1.02859840820181 -0.286658572777553 -2.34822708854815 -3.19758582270386 -1.94852886071016 -2.14837797462916 -3.28047778472708 -0.41927803967464 0.893244519306842 -1.622423718741 -2.97140523769419 0.0182294799858539 2.18322008988477 -0.314762354422411 0.314762354422411 0.35 -1 -1.45690004046945 -1.83461486577634 -1.268042627816 -0.404694455685957 1.24106299743694 0.512612977202212 0.512612977202212 0.728450020234723 0.971266693646297 -0.85 0.2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.12490569619937 -0.44966050631773 -1.17411354427407 -1.09917012655445 0.252934034803723 -0.210778362336436 -0.16380489873003 -0.915380316432522 2.63051396195872 -0.95392264554547 0.992464974658419 -0.724311099665207 1.76287357590474 -0.705149430361895 0.0766466772132495 0.623903952515851 0.151760420882234 -0.0505868069607446 0.893700256306489 -0.876837987319574 1.41643059490085 0.65762849048968 0.0505868069607446 -0.961149332254148 0.505868069607446 0.69135302846351 0.826251180358829 -0.202347227842979 -0.640766221502765 1.26467017401862 1.36584378794011 1.80426278159989 -0.708215297450425 0.236071765816808 -0.72507756643734 -0.893700256306489 -0.522730338594361 -0.0674490759476595 -0.0505868069607446 0.404694455685957 0.404694455685957 0.994873870227978 1.02859840820181 0.303520841764468 0.404694455685957 -1.28153244300553 0.573317145555106 0.792526642384999 1.09604748414947 -1.31525698097936 0.118035882908404 0.303520841764468 0 -0.809388911371914 -0.69135302846351 1.16349656009713 0.202347227842979 -1.50074193983542 -0.118035882908404 -0.556454876568191 0.354107648725212 -1.04546067718872 1.07918521516255 1.07918521516255 0.455281262646702 0.202347227842979 0.0168622689869149 0.455281262646702 -0.0505868069607446 0.741939835424255 0.623903952515851 0.320383110751383 1.16349656009713 0.489005800620532 0.590179414542021 0.489005800620532 0.843113449345744 -1.43329286388776 NA 0.910562525293404 NA -1.21408336705787 0.844966445937713 0.946653697511011 -1.01765272482434 0.273442199787809 -0.309901159759517 0.565113879561472 -1.00262139922197 0.346360119731224 1.11199827913709 0.155651713725368 0.605312220043098 0.121062444008619 -1.98888300871304 -1.71216885097905 0.625436886060115 -0.993340936683713 1.68622689869149 1.01173613921489 -0.0586513703892691 NA NA NA NA NA NA NA NA NA NA -1.12736312655374 0.202347227842979 NA 1.35824933091546
RV1781C -0.722668670867781 -0.947498924026646 -1.14021056959139 0.39163979582512 -0.217577664347289 0.696248525911324 0.130546598608373 -3.11951976257925 -0.177497568283315 -0.24849659559664 -1.20698346432654 -1.63297762820649 1.49097957357984 NA -2.1 2.1 -0.575 -0.325 -0.234605481557077 0.293256851946346 0.351908222335615 NA 0.0293256851946346 -0.205279796362442 1.40763288934246 0.791793500255133 0.234605481557077 0.5 -0.722668670867781 0.374717088598108 -0.149886835439243 0.262301962018676 0.786905886056028 -0.824377594915839 -0.149886835439243 -0.262301962018676 0.262301962018676 1.08667955693451 0.936792721495271 -2.0609439872896 -1.94852886071016 -0.412188797457919 NA -1.64875518983168 -0.824377594915839 -0.89932101263546 -0.374717088598108 -0.0749434177196217 0.44966050631773 NA 0.262301962018676 0.674490759476595 0.337245379738298 2.39818936702789 0.824377594915839 0.44966050631773 1.386453227813 NA NA NA NA 0.44966050631773 NA -0.786905886056028 0.44966050631773 0.299773670878487 NA NA 0.149886835439243 0.599547341756974 -3.40992550624279 -0.224830253158865 1.16162297465414 NA NA NA 0.262301962018676 NA -0.524603924037352 -2.47313278474752 0.187358544299054 1.87358544299054 0.674490759476595 -5.09615240493427 NA 0.187358544299054 -2.84784987334562 2.13588740500922 NA 0.337245379738298 NA -2.772906455626 NA NA 0.262301962018676 NA 0.0786905886056028 NA 0 -0.55886377213775 -0.655219594920121 -0.828660075928389 0.475 0.925 0.867202405041337 -1.39715943034438 1.9752943670386 -0.385423291129483 1.6621379429959 -0.537205029671624 -0.597406101250699 0.443236784798905 0.693761924033069 0.989253113899006 -0.674490759476595 -0.809388911371914 -0.224830253158865 0.404694455685957 -0.584558658213049 -0.404694455685957 -1.34898151895319 0.314762354422411 0.269796303790638 -0.494626556949503 0.089932101263546 -0.629524708844822 0.044966050631773 0.44966050631773 0.044966050631773 -0.269796303790638 0.314762354422411 0.809388911371914 -0.629524708844822 -0.404694455685957 -0.719456810108368 -0.764422860740141 -0.584558658213049 0.224830253158865 -0.314762354422411 -1.07918521516255 0 0.404694455685957 -0.359728405054184 0.674490759476595 -0.359728405054184 0.179864202527092 -0.224830253158865 -0.44966050631773 2.56306488601106 1.75367597463915 -3.01272539232879 0.89932101263546 -1.03421916453078 0.179864202527092 1.30401546832142 -0.089932101263546 -0.359728405054184 -0.134898151895319 -1.1691173164261 1.79864202527092 0.584558658213049 0.584558658213049 0.584558658213049 0.539592607581276 -0.404694455685957 1.93354017716624 0.359728405054184 0.044966050631773 0.629524708844822 0.134898151895319 -0.584558658213049 -0.494626556949503 0.269796303790638 0.809388911371914 -0.584558658213049 -0.404694455685957 -0.89932101263546 0.719456810108368 1.61877782274383 0.179864202527092 2.12266209599987 0.944287063267233 -0.652007734160709 0.177497568283315 0.0118331712188876 0.177497568283315 -1.19515029310765 -0.224830253158865 1.64481079942538 -0.0442289022607604 -0.420174571477223 0.375945669216463 -0.973035849736728 -1.70281273703927 -0.686535237324392 -2.99907498410129 0.790782269731181 -1.06988189434219 0 NA NA NA NA NA NA NA NA NA NA NA NA NA -0.1
RV1830 -1.48616608020267 -0.731650993330544 2.10349660582531 -2.13909926576863 0.443236784798906 1.29116802528377 0.211982810121216 -1.93916093349521 0.0108788832173642 -0.641854109824502 -0.0108788832173644 -0.598338576955044 -0.0108788832173644 0.402942531635369 -0.674490759476595 0.674490759476595 0.025 1.025 0.289067468347112 -0.62631284808541 0.337245379738298 NA 0.36133433543389 0.409512246825076 0.698579715172188 0.0722668670867781 1.34898151895319 0.674490759476595 -0.786905886056028 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.10264576331826 -0.346043085296688 -0.645165074281961 -1.31965583375856 -0.32258253714098 -0.938421926228306 0.289067468347112 0.770846582258966 0.0539592607581277 -2.21232969108323 0.728450020234723 -0.647511129097532 1.40294077971132 -0.746118096766145 -0.106498540969989 0.638991245819932 0.0709990273133258 0.75880210441117 0.309141598093439 0.505868069607446 0.646386977831737 0.365349161383156 0.89932101263546 0.75880210441117 -1.93916093349521 -2.0796798417195 1.09604748414947 1.23656639237376 0.44966050631773 0.674490759476595 -0.730698322766311 0.168622689869149 -0.140518908224291 0.618283196186879 0.533971851252305 -0.309141598093439 0.0562075632897163 0.196726471514007 -0.871217230990602 -0.196726471514007 -1.85484958856064 0.44966050631773 -1.43329286388776 -1.88295337020549 0.421556724672872 -0.224830253158865 -0.365349161383156 0.0281037816448582 -2.19209496829893 1.99536849678493 0.252934034803723 -2.0796798417195 0.618283196186879 0.365349161383156 0.365349161383156 -1.03983992085975 -1.85484958856064 0.309141598093439 -1.34898151895319 -0.702594541121453 0.196726471514007 -0.281037816448581 -0.505868069607446 -0.112415126579432 -0.028103781644858 -0.028103781644858 0.477764287962588 1.60191555375691 0.224830253158865 0.309141598093439 0.281037816448581 -0.224830253158865 1.01173613921489 0.44966050631773 0.112415126579433 0.646386977831737 0.224830253158865 -0.224830253158865 0.646386977831737 -1.34898151895319 0.168622689869149 0.75880210441117 1.40518908224291 -2.47313278474752 1.32445458224495 -1.16012410629974 -0.260803093664283 1.325 0.175 0.825 -0.375 -1.075 -0.225 -1.23269000869861 0.697749061527512 0.651232457425678 -2.7212213399573 -1.00010698818943 -0.0941149896944087 -0.65880492786086 0.8 -0.45 0.754089047862032 NA NA NA NA NA NA NA NA NA NA -1.5264790872365 0.674490759476595 NA 0.5
RV1919C -0.963558227823707 -2.05559088602391 -0.770846582258966 -2.43474713176917 -1.743805378159 0.954157659747379 -0.263215906137208 -2.32024821259949 1.26100446336929 0.410559592724884 -4.19357298283274 -2.87391714907419 0.263931166751711 0.549969388496301 -0.149886835439243 0.149886835439243 0.65 -0.4 0.269796303790638 -0.876837987319574 -2.1583704303251 0.573317145555106 0.674490759476595 0.640766221502765 -0.573317145555106 0.843113449345744 -1.07918521516255 0 -0.583034385310277 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.504858352901643 0.0121166004696394 NA NA NA NA 1.39715943034438 0.867202405041337 0.871649596862062 -2.57344166692609 1.32822795712314 -0.124521370980295 0.747128225881767 -0.511819458661652 1.14663429111021 1.07918521516255 0.179864202527092 2.19209496829893 0.303520841764468 -0.505868069607446 1.14663429111021 0.370969917712127 2.46189127208957 0.505868069607446 -1.41643059490085 0.0674490759476595 -0.337245379738298 NA 0.607041683528936 -0.269796303790638 -0.640766221502765 0.539592607581276 0.168622689869149 0.944287063267233 2.39444219614191 -0.640766221502765 -1.14663429111021 -0.0674490759476595 -1.18035882908404 0 -1.04546067718872 1.04546067718872 -0.607041683528936 -0.337245379738298 0.843113449345744 -0.101173613921489 0.438418993659787 -0.101173613921489 -0.876837987319574 1.65250236071766 0.775664373398084 -1.51760420882234 0.505868069607446 2.12464589235127 -1.34898151895319 0.438418993659787 -0.775664373398084 0.539592607581276 -2.02347227842979 -0.708215297450425 0.202347227842979 0.101173613921489 0.0674490759476595 -0.910562525293404 -0.708215297450425 -0.708215297450425 -0.202347227842979 1.48387967084851 1.14663429111021 -0.0337245379738298 0.607041683528936 1.21408336705787 0.472143531633617 0.539592607581276 0.370969917712127 0.303520841764468 0.640766221502765 0.269796303790638 0.472143531633617 -0.708215297450425 -0.843113449345744 0.640766221502765 0.202347227842979 -2.19209496829893 2.68993338600785 0.391933819695859 -0.118491619908051 1.02038345664408 -0.0518839045751227 1.47004396296181 -0.812847838343589 -0.224830253158865 -1.08956199607758 -0.663249246818652 0.550834120239219 0.865596474661631 -1.56257025945411 -2.28202706956248 -1.06988189434219 -1.11639849844402 -0.25 0 0.674490759476595 NA NA NA NA NA NA NA NA NA NA NA NA NA 1.3925
RV2881C 0.400478888439228 -0.147544853635505 -0.316167543504654 -0.760140379727591 -0.867202405041337 1.44533734173556 0.310479873409861 -3.33498208852317 1.18035882908404 0.800957776878457 -1.9813166059625 0.927424794280318 0.885269121813031 0.388063176685164 0.327025822776531 -0.327025822776531 0.05 -0.65 0.134898151895319 -0.314762354422411 -2.29326858222042 -0.359728405054184 0.404694455685957 -0.359728405054184 0.89932101263546 0.584558658213049 -0.674490759476595 -0.435155328694578 1.01173613921489 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.36942063287672 -0.388343164547131 -0.119909468351395 -1.55882308856813 -0.419683139229882 -0.719456810108368 NA NA 0 -4.8 3.5 -0.45 -0.4 -0.428648333125313 0.695790467670593 1.43418035172918 0.454393774805285 1.64575745312289 -0.134898151895319 -0.674490759476595 0.620531498718468 NA 1.48387967084851 0.836368541750978 -1.37596114933225 -0.404694455685957 0.809388911371914 0.890327802509106 0.458653716444085 -0.674490759476595 -0.0809388911371914 0.701470389855659 0.647511129097531 0.728450020234723 0.836368541750978 0.134898151895319 -0.593551868339404 -1.07918521516255 0.107918521516255 0.0809388911371914 -1.13314447592068 0.56657223796034 -1.53783893160664 -0.377714825306893 0.431674086065021 0.188857412653447 -2.45514636449481 -1.29502225819506 -3.07567786321327 1.40294077971132 0.971266693646297 -2.07743153918791 1.83461486577634 1.78065560501821 -1.83461486577634 -0.485633346823149 -3.48037231889923 0 -1.78065560501821 -0.0269796303790638 -0.485633346823149 -0.242816673411574 -0.458653716444085 -1.34898151895319 -0.35073519492783 -0.35073519492783 -0.0269796303790638 0.134898151895319 1.02522595440442 1.37596114933225 1.02522595440442 0.971266693646297 0.809388911371914 0.296775934169702 0.593551868339404 0.701470389855659 0.269796303790638 0.944287063267233 0.161877782274383 -0.296775934169702 -0.458653716444085 0.890327802509106 NA -0.512612977202212 0.856084425489525 0.197411929602906 -0.0164509941335755 0.722668670867781 -0.369363987332421 0.401482594926545 -0.883261708838399 -1.10809196199726 2.6497851265152 0.263931166751711 0.909096241033672 2.02347227842979 -1.02639898181221 -1.70088974128881 0.7 0.65 NA NA 1.22251450155133 NA NA NA NA NA NA NA NA NA NA NA NA NA 0.1475
RV2965C -1.50555973097454 -0.0843113449345744 -0.397467768977279 1.01173613921489 -0.936792721495271 NA -1.19909468351395 -3.23045574275632 0.699471898716469 -0.724453037956343 -0.724453037956343 -1.09917012655445 -1.34898151895319 NA NA NA 1.45 -0.1 0 1.37964018983849 0.735808101247195 -0.367904050623597 -0.613173417705996 -0.0919760126558993 0.306586708852998 NA 0.643832088591295 -1.54383440502421 -0.0774005789563304 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.273442199787809 0.30078641976659 0 -0.674490759476595 -1.25262569617082 -1.03582509491049 -0.075 0.075 0.960157434078447 -0.658620388665381 3.00743526872505 -0.944287063267233 0.960157434078447 -0.486657889748936 0.636312037242071 0.114536166703573 1.7816737042778 2.87955670391931 -0.259419522875614 0.0518839045751227 0.129709761437807 -0.363187332025859 0.57072295032635 0.415071236600982 -1.19332980522782 0.622606854901472 0.933910282352209 NA 0.57072295032635 0 -1.24521370980294 -1.45274932810344 -0.233477570588052 -0.441013188888543 3.03520841764468 -0.337245379738298 -0.285361475163175 -0.103767809150245 -1.55651713725368 -1.27115566209051 -0.363187332025859 -1.01173613921489 -1.9456464215671 -1.1414459006527 1.19332980522782 -0.233477570588052 0.155651713725368 -0.38912928431342 0.596664902613911 0.726374664051718 1.16738785294026 -0.415071236600982 0.311303427450736 1.32303956666563 -0.492897093463666 0.38912928431342 -0.337245379738298 1.9456464215671 -0.544780998038788 -0.0518839045751227 -0.0778258568626841 0.259419522875614 -0.622606854901472 -1.03767809150245 0.907968330064647 0.907968330064647 0.129709761437807 0.804200520914402 0.518839045751227 2.17912399215515 1.21927175751538 0.518839045751227 0.363187332025859 0.38912928431342 0.0259419522875613 0.415071236600982 -0.0778258568626841 -0.0778258568626841 0.207535618300491 NA NA 0.18159366601293 3.06115036993224 -0.95985223463977 1.44180134823896 -0.180572329308695 -0.84975213792327 1.26467017401862 -0.885269121813031 0.337245379738298 -0.800957776878457 -0.168622689869149 1.72838257115878 -0.424679367077856 -0.0249811392398739 0.0249811392398739 0.391371181424691 -1.27403810123357 0.298703050625349 -0.125262569617082 0.35 -0.45 0.751137436689845 NA NA NA NA NA NA NA NA NA NA NA NA 0.525706033121464 0.793329607574852
RV2967C 0.15 0.5 -1.5 -0.633612531629529 -0.633612531629529 0.470099620241263 -1.08327303794726 -4.33601202520668 -0.202347227842979 0.573317145555106 -2.12464589235127 -1.41643059490085 1.01173613921489 0.679760218535006 -2.65 2.65 NA NA 0.722668670867781 -0.240889556955927 -0.915380316432522 0.843113449345744 -0.0240889556955927 -0.529957025303039 0.529957025303039 2.36071765816808 0.36133433543389 -0.3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.8 0.1 0 -3.43990287333064 2.19209496829893 -1.41643059490085 1.04546067718872 NA 0.694328722990613 0.456273160822403 -0.218217598654193 0.653078354413846 -0.0107062025313745 -0.695903164539344 0.845789999978588 NA 1.7665234176768 0.438954303786355 -0.460366708849105 1.46674974679831 0.56742873416285 NA 0.610253544288348 -0.824377594915838 -0.11776822784512 -1.29545050629632 -0.503191518974603 -0.438954303786355 0.610253544288348 0.289067468347112 -0.224830253158865 0.11776822784512 0.0321186075941235 -0.503191518974603 -1.74511101261405 -0.0749434177196217 -1.98064746830429 -0.224830253158865 NA -0.802965189853089 0.417541898723606 -0.203417848096116 -1.85217303792779 0.289067468347112 2.19477151893178 NA -0.224830253158865 2.21618392399453 0.56742873416285 -0.974264430355082 NA 0.546016329100101 -1.48816215186106 -0.0535310126568726 0.0963558227823707 -0.0963558227823707 0.11776822784512 -1.23121329110807 0.717315569602093 0.717315569602093 0.588841139225599 -0.139180632907869 2.49454518981026 1.80934822780229 0.610253544288348 1.42392493667281 0.695903164539344 0.995676835417831 NA 0.460366708849105 0.182005443033367 0.438954303786355 0.610253544288348 NA 0.524603924037352 0.396129493660857 1.83076063286504 -0.481779113911854 1.23335453161435 0.582514746820696 0.12701449366767 0.867202405041337 -0.211982810121216 1.90784529109094 -0.674490759476595 -0.443236784798905 -0.944287063267233 -0.353304683535359 0.995676835417831 1.18838848098257 -1.89499784805329 -1.47745594932968 0.828660075928388 -0.481779113911854 0.25 -0.25 0.693226613906501 NA NA NA NA NA NA NA NA NA NA NA NA NA 0.495
RV3113 NA NA NA -0.790782269731181 NA 3.07009587072106 -0.0930332082036684 -2.69796303790638 -0.399698227837982 0.874339873395586 -0.349735949358235 -1.99849113918991 0.824377594915839 NA NA NA -1.23886057863048 0.660725641936256 -0.910562525293404 -2.1583704303251 -0.134898151895319 -0.404694455685957 NA 0.539592607581276 0.134898151895319 0.404694455685957 0.944287063267233 NA NA 0.255488924044165 0.48031917720303 0.112415126579433 0.296367151891231 NA 0.0306586708852998 -1.27744462022082 0.378123607585364 0.705149430361895 0.521197405050096 -1.35920107591496 -1.54315310122676 NA 2.97389107587408 NA NA 0.153293354426499 -0.378123607585364 NA 0.153293354426499 1.80886158223269 0.950418797444293 0.54163651897363 0.398562721508897 -0.459880063279497 -0.0919760126558993 1.19568816452669 NA NA -1.42051841768556 -0.132854240502966 NA 0.112415126579433 NA -0.132854240502966 0.582514746820696 0.705149430361895 -2.11544829108569 0.562075632897163 NA NA -2.01325272146802 -1.68622689869149 2.21764386070335 NA 1.19568816452669 NA 1.05261436706196 3.56662537965654 -0.41900183543243 -0.500758291126563 0.705149430361895 1.62490955692089 -0.132854240502966 NA 0.235049810120632 1.25700550629729 -1.80886158223269 3.70969917712127 2.05413094931509 0.623392974667762 NA -1.03217525313843 NA -0.766466772132495 1.05261436706196 NA NA NA NA NA NA NA NA NA 0.569569974669125 -2.12839306323726 2.54807620246714 -0.869343645547612 1.64875518983168 -0.585100417859215 NA NA NA NA -0.149886835439243 -0.674490759476595 -0.112415126579433 NA -0.412188797457919 -0.20609439872896 -0.599547341756974 0.299773670878487 0.131150981009338 1.0492078480747 0.318509525308392 -1.16162297465414 0.299773670878487 -0.0936792721495271 0.468396360747636 0.0749434177196217 NA 0.768170031626122 -1.06794370250461 0.562075632897163 -1.59254762654196 -0.674490759476595 0.149886835439243 0.786905886056028 0.131150981009338 -0.543339778467257 0.149886835439243 -1.3677173733831 -0.487132215177541 -1.01173613921489 -1.79864202527092 -0.299773670878487 0.749434177196217 NA 3.20383110751383 NA NA NA NA 1.18035882908404 NA -1.92979300628026 -0.618283196186879 0 0.131150981009338 -0.224830253158865 -0.0936792721495271 -0.0936792721495271 0.20609439872896 0.0562075632897163 1.0492078480747 1.08667955693451 0.24356610758877 -0.131150981009338 0.281037816448581 -0.524603924037352 -0.843113449345744 0.112415126579433 1.3677173733831 -0.0187358544299054 -0.768170031626122 NA NA 0.693226613906501 NA -1.46139664553262 1.14857372140903 1.54863078375826 -1.20329151490625 1.41425481825738 -0.892068423823884 -1.06613055530172 -0.718006292346053 -0.630975226607137 1.19667715391009 -0.622606854901472 0.674490759476595 0.726374664051718 -1.01173613921489 -1.53057518496612 0.641588771209444 0.954157659747379 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.501680055087821
[+] Show/hide bicluster #161 motif PSSM #1. bicluster 161 motif PSSM #1 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0 0.666667 0.333333 0
2 0 1 0 0
3 0 0.111111 0.888889 0
4 0.111111 0 0.888889 0
5 0 1 0 0
6 0.111111 0 0.888889 0
7 1 0 0 0
8 0 0.777778 0.222222 0
9 0 0.333333 0.666667 0
10 0.777778 0.111111 0.111111 0
11 0 0.222222 0.333333 0.444444
12 0 0 0.777778 0.222222
13 0.444444 0.555556 0 0
14 0 0 0.777778 0.222222
15 0.444444 0 0.555556 0 [+] Show/hide bicluster #161 motif PSSM #2. bicluster 161 motif PSSM #2 Mycobacterium tuberculosis H37Rv 8x4
POSITION A C G T
1 1 0 0 0
2 1 0 0 0
3 1 0 0 0
4 0 0 0 1
5 0 0 0 1
6 0 0 1 0
7 1 0 0 0
8 0 0 0 1 |