Bicluster 162 (zzz

GENES 2867:::H37Ra..7H9.shake.replicate.3 2867:::H37Rv..Dubos.media.replicate.4 2867:::H37Rv..Sauton.s.media.replicate.1 2885:::Strain.1254...replicate.2 2885:::Strain.3160..replicate.2 2885:::Strain.9700665..replicate.4 2885:::Strain.9802501..replicate.4 2885:::Strain.CDC1551..replicate.3 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.3 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.5 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.1 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.4 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN...2hr.hypoxia.rep.3 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.3 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration.rep2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.05.mM.DETA.NO.rep.1 4062:::MTB1254.Day.0.rep.3 4082:::H37Rv.wild.type.Vs.Rv3676.null.1 4082:::H37Rv.wild.type.Vs.Rv3676.null.4 4082:::Rv3676.null.Vs.H37Rv.wild.type.1 4082:::Rv3676.null.Vs.H37Rv.wild.type.4 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.2 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.4 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.5 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.6 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.6 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4 4101:::NRP.Day14..2 4101:::NRP.Day14..4 4101:::NRP.Day8..1 4107:::Dubos.NRP.1vsDubos.log.phase 4107:::EMB.10ug.mL.vs.DMSO.12h.1 4107:::pH5.2vspH6.8..5.5h. 4107:::pH5.6vspH6.8..5h. 4107:::X0.15mg.mL.TricvsEtOH..6hA 4107:::X0.1mM.GSNOvsDMSO..4h 4107:::X0.1ug.mL.Mtmvsctrl..0.75h. 4107:::X0.1ug.mL.Mtmvsctrl..1.5h. 4107:::X0.2mg.mL.AmpvsEtOH..6h 4107:::X0.2mg.mL.AmpvsEtOH..6hC 4107:::X0.2ug.mL.Mtmvsctrl..1.5h. 4107:::X100ug.mLCephalexinvsEtOH.6h 4107:::X10ug.mL.ClotrimvsEtOH..6hA 4107:::X10ug.mL.LevovsEtOH..6h 4107:::X10ug.mL.TriclosanvsDMSO..6hB 4107:::X12ug.mLEthionamidevsEtOH.6h 4107:::X1ug.mL..109vsDMSO..6h 4107:::X1ug.mL..59vsDMSO..6h 4107:::X25ug.mL.TRZ.DMSO..6h 4107:::X2mM.DTTvsDMSO..6h.A 4107:::X2ug.mL..111891vsDMSO..6h 4107:::X50ug.mL.PA.1vsDMSO..6h 4107:::X50ug.mL.PA.21vsDMSO..6hA 4107:::X5ug.mLProcept.6778vsDMSO.6hA 4107:::X60ug.mL.ChlorprovsEtOH..6h 4107:::X9ug.mLAscidideminNpvsDMSO.6hA 4363:::H37Rv.hypoxia.1.day.rep.2 4363:::H37Rv.hypoxia.12hr.rep.1 4363:::H37Rv.hypoxia.4.day.rep.1 4363:::H37Rv.hypoxia.4.day.rep.4 4363:::H37Rv.hypoxia.4.day.rep.7 4363:::H37Rv.hypoxia.4hr.rep.2 4363:::H37Rv.hypoxia.4hr.rep.3 4363:::H37Rv.hypoxia.4hr.rep.5 4363:::H37Rv.hypoxia.4hr.rep.6 4363:::H37Rv.hypoxia.7.day.rep.1 4363:::H37Rv.hypoxia.7.day.rep.4 4363:::H37Rv.hypoxia.8hr.rep.1 4364:::H37dosR.mutant.hypoxia.1.day.rep.2 4364:::H37dosR.mutant.hypoxia.1.day.rep.3 4364:::H37dosR.mutant.hypoxia.1.day.rep.4 4364:::H37dosR.mutant.hypoxia.12hr.rep.1 4364:::H37dosR.mutant.hypoxia.12hr.rep.3 4364:::H37dosR.mutant.hypoxia.4.day.rep.1 4364:::H37dosR.mutant.hypoxia.4hr.rep.1 4364:::H37dosR.mutant.hypoxia.4hr.rep.4 4364:::H37dosR.mutant.hypoxia.8hr.rep.2 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.2 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.3 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6 4575:::Extracted.Lung.Surfactant.2hrs.rep.2 4575:::Extracted.Lung.Surfactant.30min.rep.4 4575:::Purified.Human.SP.A.Coated.2hrs.rep1 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep1 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.1 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2hrs..DS..rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2hrs..DS..rep.2 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages.rep.1 4615:::AA_10uM_10.min_01 4615:::AA_30uM_2h_03 4615:::AA_30uM_2h_08 4615:::AA_30uM_4h_04 4615:::AA_30uM_4h_05 4615:::AA_30uM_4h_09 4615:::AA_3uM_10.min_01 4615:::AA_3uM_10min_02 4615:::AA_60uM_24h_02 4615:::AA_60uM_24h_03 4615:::Acetate.3mM.2h.03 4615:::Acetate.3mM.2h.06 4615:::Acetate.3mM.30m.07 4615:::Acetate.3mM.60m.01 4615:::CK_AA_NA.2h 4615:::CK.OA_NA_2H 4615:::CK.PA.NA.101801.2 4615:::CK.PA.Na.4h.2 4615:::ETYA_30uM_10min.01 4615:::Glucose_40mM_1h.OA_50uM_10min 4615:::L2A_30uM_1h_05 4615:::L2A_30uM_30min_07 4615:::L2A_30uM_4h_06 4615:::MAPP_5uM_4h_01 4615:::MTB1254_Pellicle_14D_01 4615:::MTB1254.0485.1._ETYA_10m_01 4615:::MTB1254.0485.1._PA_12h_04 4615:::MTB1254.0485.1._PA_4h_04 4615:::MTB1254.3219.3._01 4615:::MTB1254.3524.1._PA_12h_03 4615:::MTB1254.3524.1._PA_12h_05 4615:::MTB1254.B4.1.Compl._PA_30MIN_01 4615:::MTB1254.B4.1.Compl._PA_30MIN_02 4615:::MTB6548_PA50_1h_01 4615:::OA_50uM_10min_04 4615:::OA_50uM_10min.Glu_40mM_20min_01 4615:::OA_50uM_1h_07 4615:::OA_50uM_30min_04 4615:::PA_100uM_2h_T0_01 4615:::PA_50uM_10min_09 4615:::PA_50uM_1h_07 4615:::PA_50uM_1h_09 4615:::PA_50uM_2h_03 4615:::PA_50uM_2h_07 4615:::PA_50uM_30.min_07 4615:::PA_50uM_3d_02 4615:::PA_50uM.OA_10uM_24h_01 4615:::Rv_Rv3524.1 4615:::Rv.MT71_100703_01 4615:::Rv.MT71_100803_01 4615:::Rv.MT90_100803_01 4615:::Rv.MT96_100503_01 4615:::Rv.MT96_100703_01 4615:::Rv.p0485.2._300uM.PA_4h 4615:::Rv.pMV0481.1. 4615:::Starvation_1254_5d_02 4615:::Starvation_1254_PA50_24h_02 4615:::Starvation_1254_PA50_6h_01 4615:::Starvation_1254_PA50_6h_03 4615:::Starvation_OA50_6h_01 4615:::Starvation_OA50_6h_04 4615:::TBD040 4615:::TBD091 4615:::TBD1137 4615:::TBD425 4615:::TBD625 4615:::WT_85.1_PA_10min_01 4615:::X7H9_MTB1254.3524.1._OA100_10M_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.3 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak.4hr.rep.1 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2 4731:::X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1 4795:::CDC1551.ctrl.vs.ctrl.at.0.hr.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.4 4815:::H37Rv.reaeration.for.1hrs.rep.1 4815:::H37Rv.reaeration.for.1hrs.rep.5 4815:::H37Rv.reaeration.for.4hrs.rep.5 4928:::Mtb.Erdman.strain.2000.ppm.CO.rep.2 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.2 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.3 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.1 Rohde_CellHostMicrobe2007:::CDC1551.ctrl.vs.pH.5.5.7H9.broth.for.2.hr Rohde_CellHostMicrobe2007:::CDC1551.ctrl.vs.pH.6.5.7H9.broth.for.2.hr RV0006 0.524603924037352 -0.474641645557603 -1.12415126579433 1.54169316451793 0.449660506317731 1.28474430376494 -1.28474430376494 -1.12415126579433 0.809388911371914 0.0864731742918712 0.760963933768466 0.795553203485215 0.294008792592362 0.709080029193344 -0.0864731742918713 -1.95429373899629 -0.069178539433497 -1.38357078866994 -0.294008792592362 -1.50463323267856 -0.69178539433497 -1.66028494640393 -1.72946348583742 -0.882026377777086 -1.55651713725368 -0.207535618300491 -0.57072295032635 -3.3551591625246 -1.55651713725368 -1.55651713725368 -2.23100789673028 0.294008792592362 -1.19332980522782 -0.847437108060338 -1.02038345664408 1.1414459006527 0.397776601742607 0.622606854901473 0.432365871459356 -2.10994545272166 1.72946348583742 0.68947944302052 0.674490759476595 -0.68947944302052 -0.674490759476595 0.465166041018342 0.162808114356419 -0.0697749061527512 0.023258302050917 0.209324718458254 -0.209324718458254 -0.116291510254585 0.627974155374761 0.883815477934849 0.302357926661922 -1.11639849844402 1.11639849844402 1.39549812305502 0.651232457425678 1.25594831074952 1.48853133125869 -0.186066416407337 -1.67459774766603 -3.07009587072105 -1.67459774766603 -0.209324718458254 0.674490759476595 0.0930332082036683 -1.34898151895319 -0.348874530763756 -0.9535903840876 0.511682645120176 0.55819924922201 1.06988189434219 -0.255841322560088 0.815663244018208 0.567992218506607 0.496993191193281 -0.828321985322134 -0.804655642884359 -0.0709990273133257 -3.39654275307857 0.794935537954559 -0.602223892389817 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