Bicluster 164 (zzz

GENES 2867:::H37Ra..Youman.media.replicate.2 2867:::H37Rv..Dubos.media.replicate.4 2885:::Strain.9802501..replicate1 2885:::Strain.M3061a..replicate.1 4055:::H37Rv.Vs.M.bovis.rep2 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.1 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.6 4060:::H37Rv.wild.type.Vs.H37Rv.sigE.null.mutant.rep.1 4060:::H37Rv.wild.type.Vs.H37Rv.sigE.null.mutant.rep.2 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs...0.5.mM.DNO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration.rep2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1 4062:::MTB1254.Day.0.rep.1 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.1 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.3 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.5 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.2 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.4 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.5 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.6 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.4 4084:::High.iron.wt.vs.high.iron.ideR.KO.1a 4084:::High.iron.wt.vs.high.iron.ideR.KO.3a 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.2 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.3 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.1 4099:::H37Rv.hypoxia.2hr.rep.2 4099:::H37Rv.hypoxia.2hr.rep.5 4100:::H37Rv.0.2..Oxygen..2h..6 4101:::H37Rv.Day6.3 4101:::NRP.Day12..3 4101:::NRP.Day14..4 4107:::DIPED.10ug.mL.vs.DMSO.12h.2 4107:::EMB..10ug.mL..DMSO..12h 4107:::EMB.10ug.mL.vs.DMSO.12h.2 4107:::Palmitate.Glucose..2 4107:::PBS.Tween.7H9 4107:::pH4.8vspH6.8..4h.A 4107:::pH5.6vspH6.8..2h.A 4107:::pH5.6vspH6.8..5h. 4107:::Rif.0.5ug.mL.vsDMSO.2.5hA 4107:::Rif.5ug.mL.vsDMSO.2.5h 4107:::X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054. 4107:::X.241..1ug.mL..DMSO..12h..1 4107:::X0.12mg.mL.BZAvspH5.6..5h. 4107:::X0.12mg.mL.BZAvspH5.6..7h. 4107:::X0.12mg.mL.PZAvspH5.6..5.5h. 4107:::X0.12mg.mL.PZAvspH5.6..6h.A 4107:::X0.13mg.mL.TLMvsDMSO..6hA 4107:::X0.1mM.GSNO.DMSO..6h 4107:::X0.1mM.GSNOvsDMSO..6h.A 4107:::X0.1mMGSNO.10ug.mLmdvsDMSO.6h 4107:::X0.1mMGSNO.10ug.mLmdvsDMSO.6hA 4107:::X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA 4107:::X0.2ug.mL.INH.EtOH..6h 4107:::X0.4mM.NaN3.DMSO 4107:::X0.4ug.mL.INHvsEtOH..6h 4107:::X0.5ug.mL.CeruleninvsDMSO..6hA 4107:::X0.5ug.mL.CeruleninvsDMSO..6hC 4107:::X0.5ug.mLRifapentinevsEtOH.6h 4107:::X0.5uMValinomycinvsDMSO.6h 4107:::X100ug.mL.Ceph.DMSO..6h 4107:::X100ug.mLCephalexinvsEtOH.6hA 4107:::X10mM.Succinate.10mM.Gluc..2 4107:::X10mM.succinatevs10mM.glucose 4107:::X10ug.mL..109.DMSO..6h 4107:::X10ug.mL..109vsDMSO..6h 4107:::X10ug.mL..241.DMSO..6h 4107:::X10ug.mL.Amikacin.EtOH..6h 4107:::X10ug.mL.ClotrimvsEtOH..6hA 4107:::X10ug.mL.EMBvsDMSO..6hA 4107:::X10ug.mL.TriclosanvsDMSO..6hB 4107:::X10ug.mL.TRZ.DMSO..6h..1 4107:::X10ug.mLmdn.0.1mMGSNO.DMSO..2 4107:::X10uM.CCCP.DMSO..6h 4107:::X10uM.ValinomycinvsDMSO..6h 4107:::X12ug.mLEthionamidevsEtOH.6hA 4107:::X13ug.mL.clfzine.DMSO..6h..2 4107:::X150uM.Deferroxaminevsctrl..6hA 4107:::X150uM.Deferroxaminevsctrl..6hB 4107:::X1ug.mL..59vsDMSO..6hA 4107:::X1uM.ValinomycinvsDMSO..6h 4107:::X200uM.Dipyridylvsctrl..6h 4107:::X20ug.mL.ethambutol.DMSO 4107:::X20ug.mL.Prcp.6778.DMSO..6h..2 4107:::X20ug.mLProcept6778vsDMSO.6hB 4107:::X24ug.mL.cltrmazole.DMS..6h..3 4107:::X2mM.DTNBvsDMSO 4107:::X2mM.DTTvsDMSO..6h 4107:::X2ug.mL..111895vsDMSO..6hA 4107:::X2ug.mL..121940vsDMSO..6hA 4107:::X30ug.mLProcept6776vsDMSO.6h 4107:::X40ug.mL.5CL.pH5.6..2h..2 4107:::X40ug.mL.EtavsEtOH..6h 4107:::X4d.Dubos.NRP.1vsDubos.aero.A 4107:::X4mM.H2O2.ctrl..2h...1 4107:::X50ug.mL.PA.21vsDMSO..6hA 4107:::X50ug.mLAntimycinAvsDMSO..6hA 4363:::H37Rv.hypoxia.4.day.rep.1 4364:::H37dosR.mutant.hypoxia.1.day.rep.3 4364:::H37dosR.mutant.hypoxia.4hr.rep.2 4365:::H37Rv.diamide.1h.rep.1 4365:::H37Rv.diamide.1h.rep.5 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.3 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.2 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4396:::Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4396:::Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.5 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.6 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.1 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.4 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.5 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.1 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep1 4575:::Extracted.Lung.Surfactant.30min.rep.4 4575:::Purified.Human.SP.A.Coated.2hrs.rep1 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep1 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep3 4575:::Purified.Surfactant.Lipids.2hrs.rep.1 4575:::Purified.Surfactant.Lipids.2hrs.rep.2 4575:::Whole.Lung.Surfactant.30min.rep.3 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2 4583:::X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4583:::X130ug.ml.TLM.vs.DMSO.6hrs.rep.2 4615:::AA_30uM_1h_04 4615:::AA_30uM_2h_01 4615:::AA_30uM_30min_02 4615:::AA_30uM_30min_07 4615:::AA_30uM_30min_08 4615:::AA_30uM_4h_01 4615:::AA_30uM_4h_02 4615:::AA_30uM_4h_08 4615:::Acetate.3mM.10m.02 4615:::Acetate.3mM.30m.06 4615:::Acetate.3mM.60m.04 4615:::C2_ceramide_5uM_1h_01 4615:::CHP_25uM_1h_01 4615:::CK.AA.Na.2h 4615:::CK.AA0.03.2h.02 4615:::CK.OA.Na.24h.1 4615:::ETYA_3uM.AA_1h_02 4615:::Glycerol_1._10M_01 4615:::L2A_30uM_10min_01 4615:::L2A_30uM_1h_03 4615:::L2A_30uM_30min_04 4615:::L2A_30uM_4h_08 4615:::MAPP_5uM_30m_01 4615:::MDA_1254.pMV261_02 4615:::MDA_1254.pMV261.3524_02 4615:::MDG_1254.pMV261.3524_02 4615:::MTB1254_INH_20MIN 4615:::MTB1254_Pellicle_10D_04 4615:::MTB1254_SDS_90MIN_02 4615:::MTB1254_SDS_90MIN_03 4615:::MTB1254_SDS_90MIN_04 4615:::MTB1254.0485.1._PA_10m_02 4615:::MTB1254.0485.1._PA_12h_04 4615:::MTB1254.3524.1._INH_20MIN 4615:::MTB1254.3524.1._PA_12h_02 4615:::MTB1254.B4.1._PA_10MIN_01 4615:::MTB1254whiB4_SDS_90MIN_02 4615:::OA_100uM_2h_T0_01 4615:::OA_50uM_1h_01 4615:::OA_50uM_24h_05 4615:::OA_50uM_2h.1.0..BSA_30min_01 4615:::OA_50uM_2h.1.5..BSA_30min_01 4615:::OA_50uM_30min_04 4615:::OA_50uM_30min_05 4615:::OA_50uM_30min_06 4615:::OA_50uM_4h_03 4615:::OA_50uM_4h_09 4615:::OA_50uM.0.5.BSA_1h_01 4615:::PA_50uM_10min_04 4615:::PA_50uM_10min_06 4615:::PA_50uM_24h_02 4615:::PA_50uM_24h.PA_100uM_1h_01 4615:::PA_50uM_2h_01 4615:::PA_50uM_3d_02 4615:::PA_50uM.0.5.BSA_4h_01 4615:::PA_50uM.OA_10uM_24h_01 4615:::PA_50uM.OA_10uM_30min_02 4615:::PA_50uM.OA_10uM_4h_02 4615:::PA_50uM.OA_30uM_24h_01 4615:::PA_50uM.OA_30uM_24h_02 4615:::Rv_OA30_30mim_03 4615:::Rv.3524.2._01 4615:::Rv.MT106_100503_02 4615:::Rv.MT90_100703_01 4615:::Rv.MT96_100503_02 4615:::Rv.MT96_100703_01 4615:::Rv.p0485.2._300uM.PA_4h 4615:::SDS_3h_01 4615:::Starvation_1254_24h_03 4615:::Starvation_1254_6h_04 4615:::Starvation_1254_OA50_12h_03 4615:::Starvation_1254_OA50_24h_03 4615:::Starvation_T0 4615:::TBD1111 4615:::TBD1113 4615:::TBD1137 4615:::TBD1266 4615:::TBD1276 4615:::TBD662 4615:::TBD816 4615:::TBD818 4615:::TBE059 4615:::Tet_500ng_30M_01 4615:::WT_65.4_SDS_01 4615:::WT_65.4_SDS_02 4615:::WT_85.1_OA_10min_01 4615:::WT_85.1_PA_10min_01 4615:::X7H9MTB1254_SDS_90MIN_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.2 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.3 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.4hr.rep.2 4696:::H37Rv.wt.vs.dosT.null.nitric.oxide.treatment.1hr.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2 4699:::CDC1551.Ctrl.vs.H37Rv.rep.2 4703:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::H37Rv.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4731:::X5ug.ml.Streptomycin.vs.Ethanol.6hrs 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.5 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.1 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.1 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.2 4815:::H37Rv.reaeration.for.4hrs.rep.5 4815:::H37Rv.reaeration.for.4hrs.rep.7 4928:::Mtb.Erdman.strain.200.ppm.CO.rep.1 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.4 Rohde_CellHostMicrobe2007:::CDC1551.in.ctrl.vs.100.nM.Concanamycin.A.treated.macrophages.for.2.hr Rohde_CellHostMicrobe2007:::M..bovis.ctrl..vs.2.hr.after.macrophage.infection Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages...IFNg.for.48hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.48hrs RV0427C -0.916289333628582 0.814479407669851 0.5 -0.2 0.65 -2.16698095065885 -1.07631504171797 -3.28634859404554 0.0430526016687188 NA -0.958486868729898 -0.638991245819932 0.319495622909966 -0.745489786789921 0.141998054626652 0.425994163879955 0.141998054626652 1.88147422380313 2.4849659559664 0.532492704849944 0.0709990273133258 -0.106498540969989 -0.0354995136566629 0.709990273133258 -0.106498540969989 -0.212997081939977 -0.212997081939977 -0.283996109253303 NA -0.354995136566629 -0.432882129216322 -1.4194507027791 -0.775161022085042 1.78186364816951 NA 0.251675656521118 0.593954549389838 NA 0.770846582258966 NA 0.438418993659787 0.202347227842979 -1.38270605692702 -0.025 -0.125 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