|
[+] Show/hide bicluster #175 rows and columns.
bicluster 175
Mycobacterium tuberculosis H37Rv
7x237
[+] Show/hide bicluster #175 rows (genes).
bicluster 175 genes
Mycobacterium tuberculosis H37Rv
7
[+] Show/hide bicluster #175 rows (short gene names).
bicluster 175 short names
Mycobacterium tuberculosis H37Rv
7
short_name
[+] Show/hide bicluster #175 rows (long gene names).
bicluster 175 long names
Mycobacterium tuberculosis H37Rv
7
long_name
[+] Show/hide bicluster #175 rows (NCBI RefSeq gene IDs).
bicluster 175 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
12
[+] Show/hide bicluster #175 gene upstream sequences.
bicluster 175 upstream sequences
Mycobacterium tuberculosis H37Rv
7
upstream
[+] Show/hide bicluster #175 columns (arrays; conditions).
bicluster 175 arrays
Mycobacterium tuberculosis H37Rv
237
[+] Show/hide bicluster #175 ratios.
bicluster 175 ratios
Mycobacterium tuberculosis H37Rv
7x237
GENES 2885:::H37Ra..7H9.roll.replicate.2 2885:::H37Ra..7H9.roll.replicate.3 2885:::H37Rv..7H9.roll.replicate.2 2885:::H37Rv..7H9.roll.replicate.3 2885:::Strain.1006...replicate.1 2885:::Strain.1006...replicate.2 2885:::Strain.1254...replicate.3 2885:::Strain.1843..replicate.1 2885:::Strain.1843..replicate.4 2885:::Strain.9700665..replicate.1 2885:::Strain.9700665..replicate.3 2885:::Strain.9700665..replicate.4 2885:::Strain.9800608..replicate.2 2885:::Strain.9802826..replicate.4 2885:::Strain.H37Ra..replicate.4 2885:::Strain.M3061a..replicate.3 2885:::Strain.M3061a..replicate.4 4055:::H37Rv.Vs.M.bovis.rep2 4055:::H37Rv.Vs.M.bovis.rep3 4055:::H37Rv.Vs.M.bovis.rep4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.5 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.3 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.3 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN...2hr.hypoxia.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN...2hr.hypoxia.rep.2 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.5 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.6 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.1 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.3 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.4 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.5 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.6 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.3 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.4 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.5 4082:::H37Rv.wild.type.Vs.Rv3676.null.5 4082:::Rv3676.null.Vs.H37Rv.wild.type.5 4084:::High.iron.wt.vs.high.iron.ideR.Complement.1a 4084:::High.iron.wt.vs.high.iron.ideR.KO.1a 4084:::High.iron.wt.vs.low.iron.wt.1a 4084:::High.iron.wt.vs.low.iron.wt.3b 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.3 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.4 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.5 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.3 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.2 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.3 4099:::H37Rv.hypoxia.2hr.rep.3 4100:::H37Rv.0.2..Oxygen..2h..2 4101:::H37Rv.Day.0.rep.1 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2 4101:::H37Rv.Day6.2 4101:::H37Rv.Day60.1 4101:::H37Rv.Day60.2 4101:::H37Rv.Day60.3 4101:::H37Rv.Day8.2 4101:::H37Rv.Day8.3 4101:::NRP.Day30..1 4101:::NRP.Day6..1 4101:::NRP.Day8..1 4101:::NRP.Day8..2 4107:::EMB.10ug.mL.vs.DMSO.12h.1 4107:::pH4.8vspH6.8..2h.A 4107:::pH5.2vspH6.8..2h. 4107:::pH5.2vspH6.8..5h. 4107:::pH5.6vspH6.8..16h. 4107:::Rif.0.5ug.mL.vsDMSO.2.5h 4107:::Succinate.7H9.based.medium..1 4107:::UV.40J.vs.8h.2 4107:::WT.t.0h.WT.t.6h..2 4107:::X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054. 4107:::X0.1mg.mL.TriclosanvsEtOH..6h 4107:::X0.1mg.mL.TriclosanvsEtOH..6hA 4107:::X0.1mMGSNO.10ug.mLmdvsDMSO.6hA 4107:::X0.2mg.mL.TLMvsEtOH..6h 4107:::X0.2mM.NaN3.DMSO 4107:::X0.2ug.mL..111891.DMSO..5.5h..3 4107:::X0.2ug.mL.Mtmvsctrl..4h.B 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.2ug.mL.PA824.DMSO..6h..2 4107:::X0.2ug.mL.RifvsDMSO..6h 4107:::X0.4mM.NaN3.DMSO 4107:::X0.4ug.mL.PA824.DMSO..6h..1 4107:::X0.5ug.mL.CeruleninvsDMSO..6hC 4107:::X0.5ug.mLRifapentinevsEtOH.6h 4107:::X0.5ug.mLRifapentinevsEtOH.6hA 4107:::X0.5uMValinomycin.70mMKClvsDMSO.6h 4107:::X1.2mg.mL.PZAvspH5.6..6h. 4107:::X10ug.mL..59vsDMSO..6h 4107:::X10ug.mL.TriclosanvsDMSO..6hC 4107:::X10ug.mL.TRZ.DMSO..6h..1 4107:::X10uM.CCCP.DMSO..6h 4107:::X1ug.mL..111895vsDMSO..6h 4107:::X1ug.mL..111895vsDMSO..6hA 4107:::X1ug.mL..59vsDMSO..6h 4107:::X25ug.mL.AntimycinvsDMSO..6h 4107:::X2mMb.mercaptoethanolvsDMSO.6h 4107:::X2ug.mL..111895vsDMSO..6hA 4107:::X4mM.H2O2vsctrl..4h. 4107:::X50uM.NigericinvsDMSO..6h 4107:::X5ug.mL.AmivsEtOH..6hA 4107:::X5ug.mLProcept.6778vsDMSO.6h 4363:::H37Rv.hypoxia.4hr.rep.7 4364:::H37dosR.mutant.hypoxia.4hr.rep.4 4365:::H37Rv.diamide.1h.rep.6 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.2 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.3 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.5 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.1 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3 4396:::Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.5 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.4 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.6 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.5 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.6 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.4 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection..DS..rep.2 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.1 4615:::AA_30uM_1h_02 4615:::AA_30uM_1h_03 4615:::AA_60uM_24h_03 4615:::Acetate.3mM.2h.02 4615:::Acetate.3mM.30m.08 4615:::CK.4h.for.AA.NA.0.03mM 4615:::CK.4h.for.OA.NA.0.05mM 4615:::ETYA_30uM_10min.05 4615:::ETYA_30uM_10min.06 4615:::L2A_30uM_10min_04 4615:::L2A_30uM_1h_02 4615:::L2A_30uM_1h_03 4615:::L2A_30uM_1h_07 4615:::L2A_30uM_1h_09 4615:::L2A_30uM_30min_04 4615:::L2A_30uM_30min_07 4615:::LAA_50uM_10min_02 4615:::MDA_1254.pMV261_04 4615:::MDA_1254.pMV261.3524_04 4615:::MTB1254_Bottom_10D_04 4615:::MTB1254_Pellicle_10D_03 4615:::MTB1254_Pellicle_14D_04 4615:::MTB1254_Pellicle_56D_02 4615:::MTB1254.0485.1._PA_10m_04 4615:::MTB1254.0485.1._PA_30m_02 4615:::MTB1254.3524.1._PA_12h_01 4615:::MTB1254.B4.1._PA_10MIN_02 4615:::MTB1254.B4.1._PA_30MIN_01 4615:::MTB1254.B4.1._PA_30MIN_04 4615:::MTB1254.B4.1.Compl._PA_30MIN_02 4615:::MTB1254.Rv3524.2._PA50.OA30_2h_02 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_01 4615:::OA_50uM_10min_05 4615:::OA_50uM_1h_10 4615:::OA_50uM_2h_02 4615:::OA_50uM_4h_04 4615:::OA_50uM_4h_05 4615:::PA_100uM_2h_04 4615:::PA_100uM_2h_T0_01 4615:::PA_10uM_10.min_01 4615:::PA_50uM_24h_03 4615:::PA_50uM_24h_T0 4615:::PA_50uM_24h.PA_50uM_1h_01 4615:::PA_50uM_8h_03 4615:::PA_50uM.AA_30uM_2h_03 4615:::PA_5uM_10.min_01 4615:::Rv_OA30_30mim_03 4615:::Rv.p0485.2._300uM.PA_4h 4615:::Starvation_1254_OA50_12h_03 4615:::Starvation_1254_PA50.OA30_24h_04 4615:::Starvation_1254_PA50.OA30_6h_03 4615:::Starvation_1254_PA50.OA30_6h_04 4615:::TBD092 4615:::TBE057 4615:::TBE060 4615:::TBE734 4615:::X2.BA.1 4615:::X2.BA.OA.1 4615:::X7H9Cy3.MDGCy5.02 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.3 4638:::CDC1551.wild.type.vs.kstR.null.rep.1 4638:::CDC1551.wild.type.vs.kstR.null.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak24hr.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.24hr.rep.1 4696:::H37Rv.wt.vs.dosT.null.nitric.oxide.treatment.1hr.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1 4703:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4729:::H37Rv.wild.type.vs.PepD.null.mutant..DS..rep.1 4731:::X5ug.ml.Rifampicin.vs.DMSO.2.5hrs 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.3 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4815:::H37Rv.reaeration.for.24hrs.rep.2 4815:::H37Rv.reaeration.for.4hrs.rep.7 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.3 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.2 Raghavan_Nature2008:::espR.mutant..R...rep2 Rohde_CellHostMicrobe2007:::M..bovis.ctrl..vs.2.hr.after.macrophage.infection Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.24hrs
RV0388C NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.224830253158865 1.12415126579433 -0.224830253158865 0 -0.588385556139157 0.444876883910095 0.61708729058497 NA 1.27722718283866 -0.243964742789407 0.444876883910095 0.416175149464282 0.789297697259845 NA NA NA NA NA NA NA NA NA NA 0.599547341756974 -0.599547341756974 -0.25 -0.3 -0.35 0 0.215837043032511 -0.242816673411574 1.51085930122757 0.0269796303790638 -1.10616484554162 -0.188857412653447 1.40294077971132 0.890327802509106 0.161877782274383 0.809388911371914 -0.620531498718468 -0.107918521516255 0.215837043032511 -0.782409280992851 -0.0249811392398739 0.474641645557604 NA -0.487929485578814 -1.26287631561575 -1.57859539451969 -0.344420813349751 1.95171794231525 0.861052033374377 1.77950753564038 -0.947157236711815 NA 3.12848905459357 -0.803648564482752 -0.430526016687188 -0.660139892253689 0.536839584073208 2.82184909576943 0.867202405041337 0.123886057863048 0.674490759476595 -0.0963558227823708 -2.13359321875249 0.839672169960659 1.85829086794572 0.591900054234563 1.00485358044472 0.454248878831176 -0.0137651175403387 -0.536839584073208 -0.674490759476595 -2.4914862748013 0.949793110283369 -0.867202405041337 -0.839672169960659 0.31659770342779 NA -0.702020994557273 -0.481779113911854 0.564369819153886 0.839672169960659 1.0323838155254 -0.371658173589144 1.83076063286504 -0.784611699799305 2.7392583905274 -0.757081464718627 1.52792804697759 1.08744428568676 0.564369819153886 NA -0.674490759476595 0.344127938508467 3.39998403246365 -0.151416292943725 0.426718643750499 -0.289067468347112 -0.0674490759476596 0.255841322560088 -0.4 -0.45 1.3 1.2 0 0.51710958226539 0.0674490759476596 -0.0674490759476591 NA 0.4 -0.262301962018676 1.49886835439243 -0.599547341756974 -1.31150981009338 -0.797125443017794 -0.756247215170728 -0.269796303790638 0.382211430370071 0.202347227842979 NA -0.741939835424255 -0.489336433345765 NA 0.462885815327075 -0.912546321644805 -0.277731489196245 0.806743849570045 1.28285497390647 -0.568688287401835 -1.25640435588778 0.277731489196245 -0.462885815327075 -1.70606486220551 -0.330632725233625 0.171929017121485 -1.41510806399992 -1.36220682796254 -0.515787051364455 0.383533961271005 0.938996939663495 1.12415126579433 0.171929017121485 -0.542237669383145 0.542237669383145 -0.145478399102795 -0.357083343252315 1.91766980635503 -0.171929017121485 -0.224830253158865 -0.674490759476595 0.515787051364455 -0.753842613532665 -1.52091053607468 NA -3.00214514512132 -1.65316362616813 -1.2035031198504 -0.806743849570045 NA 0.965447557682185 0.145478399102795 0.039675927028035 1.49445991805599 -0.753842613532665 -0.886095703626115 -0.171929017121485 0.542237669383145 -0.542237669383145 0.092577163065415 0.648040141457905 1.62671300814944 0.621589523439215 0.542237669383145 0.515787051364455 -0.171929017121485 0.489336433345765 -1.07125002975695 -1.7325154802242 -0.383533961271005 1.2035031198504 0.71416668650463 -0.698296315693416 -0.650685203259774 0.759989588142642 1.92847357991196 2.48896590116715 1.97597292917087 -0.417994273478453 -0.351495184515972 -2.97345926360809 0.893818174271432 1.04475316939906 -0.158010073024237 -0.257061163576744 0.976092318592146 -1.13511859521671 0.674490759476595 0.822549706678775 -1.03157410272891 NA -1.22634683541199 0.833915848080154 2.41511207425491 -0.630975226607138 -1.78413684764777 0.0435155328694577 0.217577664347289 1.30546598608373 NA -0.590179414542021 NA 0.17508282 NA -0.566252935 0 0.746027658208961 -0.256529018440315 0
RV1813C -1.07918521516255 -0.202347227842979 0.584558658213049 0.314762354422411 -3.88956337964837 -1.25904941768964 1.37146454426908 -0.539592607581276 1.25904941768964 -0.494626556949503 0 -0.292279329106525 0.674490759476595 -0.921804037951347 -0.831871936687801 0.247313278474752 1.19160034174198 -0.674490759476595 0 NA -0.0709990273133258 0.510779410089072 0.897138194643627 0.674490759476595 -0.517327864064573 0.255389705044536 0.320874244799545 -1.80737329723826 -1.74843721145875 0.615554673697087 NA NA NA NA NA NA NA NA NA NA 0.347464936700064 -0.347464936700064 0.124905696199369 0.124905696199369 -0.124905696199369 -0.174867974679117 0.781552784790341 1.03850164554333 5.40663227834414 -1.38110012654731 -2.75149405056325 -1.55239936704931 3.09409253156724 0.160593037970618 -0.867202405041337 -0.224830253158865 -0.717315569602093 -0.310479873409861 NA 0.139180632907869 -0.824377594915839 -0.0374717088598109 -0.157743806651784 -0.161877782274383 -0.56657223796034 -0.485633346823149 -0.0539592607581277 3.26453527586672 3.75016862268987 3.1296371239714 -0.107918521516255 1.02522595440442 1.5648185619857 -0.431674086065021 0 0.107918521516255 -0.815009667700886 0.15457079904672 1.5457079904672 -0.365349161383156 0.379401052205585 -0.0562075632897162 2.90874140024282 NA NA 0.674490759476595 -0.112415126579433 -0.0983632357570035 0.435608615495301 -0.266985925626152 -1.1100993749719 -0.0140518908224291 -0.0281037816448582 -1.03983992085975 -1.27872206484105 1.72838257115878 -0.983632357570035 -0.590179414542021 -1.32087773730833 0.0702594541121453 0.44966050631773 0.955528575925177 -1.70027878951392 NA 0.140518908224291 -0.210778362336436 -0.646386977831737 NA 0.323193488915869 NA -0.857165340168173 -0.674490759476595 2.71201492872881 0.969580466747606 -1.02578803003732 1.01173613921489 -0.323193488915869 NA 0.623511806725457 -0.274011871037367 0.23185619857008 0.779879940644813 0.927424794280318 0 0.77825856862684 0.622606854901472 0.795553203485216 NA 0.45 0.457690158216261 0.192711645564741 -0.722668670867781 -0.337245379738298 -0.426971214714542 -0.637362827762287 NA NA NA NA NA -1.33041755309604 -1.39229743928655 0.0680678748095646 -0.959138235952956 -0.365091328524029 0.946762258714854 NA -0.736370645667108 -0.389843283000234 0.847754440810033 -1.45417732547706 -0.996266167667265 -1.72644882471532 -1.57793709785809 -1.26853766690552 -1.46655330271517 0.241331556143002 0.711618691190903 0.600234896047979 1.40467341652465 0.860130418048135 -0.216579601666797 3.65710127385934 -0.575482941571774 -0.327963396809721 0.46409914642885 -0.179451669952489 -0.600234896047979 -0.228955578904899 0.761122600143314 -1.21903375795311 -0.538355009857466 -0.402219260238337 NA NA -1.26853766690552 -0.426971214714542 0.129947761000078 1.1571538717626 0.216579601666797 0.637362827762287 1.94921641500117 -0.637362827762287 -0.055691897571462 -0.959138235952956 0.525979032619363 -1.23140973519121 -0.0804438520476673 3.34770184290677 2.19673595976322 4.54817163500273 4.01600461376431 0.105195806523873 0.0309399430952567 0.191827647190591 -1.1819058262388 -0.897258349762443 -0.439347191952645 2.48138343623958 0.585407074262705 -1.07218578275289 -0.585407074262705 1.32854240502966 0.819136796473907 0.53927815967476 1.23106355400973 -0.227974732224024 0.02987255111901 -1.71531333004421 0.224830253158865 1.01834879371957 -0.224830253158865 0.0661265450467249 0.66034060368338 -1.71216885097905 0.0259419522875614 0.441013188888543 -1.97350999995004 0.874140024281667 -2.10268293701601 0.158421317172439 NA -0.199030060173422 -1.17206590991015 0.199030060173422 0.597090180520265 0.663433533911405 NA -0.683524117862443 1.26768129348057 NA NA NA -0.526761287248846 NA 0.589519242187391 -0.44966050631773
RV1974 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.463712397140159 0.461493677536618 0.816488814103247 0.425994163879955 1.17148395066988 0.85198832775991 -1.49097957357984 0.532492704849943 -1.2424829779832 1.38448103260985 NA NA NA NA NA NA NA NA NA NA NA NA 1.25904941768964 -0.134898151895319 -0.314762354422411 0 0.89932101263546 0.472143531633617 1.61877782274383 -0.0449660506317731 -0.562075632897163 NA 2.78789513916993 0.921804037951347 -0.314762354422411 0.921804037951347 0.404694455685957 0.0449660506317731 0.314762354422411 0.247313278474752 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.303520841764468 1.04546067718872 0.674490759476595 -0.303520841764468 NA 0.404694455685957 3.77714825306893 0.236071765816808 3.33872925940915 1.95602320248213 1.55132874679617 0.910562525293404 -1.78740051261298 -0.607041683528936 NA -0.607041683528936 0.472143531633617 -0.944287063267233 -0.674490759476595 NA NA -0.269796303790638 -0.472143531633617 1.07918521516255 1.07918521516255 -0.134898151895319 -0.404694455685957 NA -0.438418993659787 1.28153244300553 NA NA 0.809388911371914 NA -0.337245379738298 -0.539592607581276 1.21408336705787 5.09240523404829 -1.65250236071766 1.18035882908404 -0.236071765816808 -0.487801352835752 1.29429307899563 -0.674490759476595 -0.089932101263546 1.43891362021674 1.1691173164261 NA NA NA NA NA NA NA NA NA NA -0.4 0 NA NA NA NA NA -1.23269000869861 0.0232583020509171 NA NA -0.348874530763756 1.53504793536053 2.06998888253162 NA -0.232583020509171 1.27920661280044 0 NA -3.18638738097564 -0.302357926661922 -0.279099624611005 -0.186066416407337 NA 0.674490759476595 0.744265665629346 1.69785604971695 0.209324718458254 0.116291510254585 1.72111435176786 -0.0465166041018341 0.0930332082036684 -0.023258302050917 -0.534940947171093 -1.25594831074952 -1.9071807681752 0.441907738967424 -2.69796303790638 NA NA NA -0.697749061527512 -1.74437265381878 -0.0697749061527512 NA 0.255841322560088 0.209324718458254 NA 0.465166041018342 -0.162808114356419 -0.697749061527512 -0.511682645120176 0.930332082036683 NA -0.279099624611005 1.48853133125869 1.58156453946236 1.65133944561511 1.97695567432795 0.790782269731181 0.55819924922201 1.18617340459677 -1.0931401963931 -1.83740586202245 0.976848686138517 1.13965680049494 0.603571149419772 -1.24939227929893 -0.488892631030015 1.74091533864905 NA NA 1.51000859216157 -0.8112118593705 -0.161027073208376 -1.16364847243034 0.575394960690934 0.6776873981471 -0.447529413870727 -0.0895058827741454 -0.248787575216777 -1.87947986910332 0.773011881647334 -0.053049835015013 NA 0.847931240484863 NA NA NA NA NA NA NA NA NA -2.06043067620933 1.54301310729577 -0.674490759476595 NA NA NA -0.793151170865996 -0.565865243426756 -0.25
RV3844 -0.117302740778538 -0.527862333503422 0.32258253714098 0.967747611422941 -0.733142129865864 -0.439885277919519 2.3753805007654 0.0879770555839036 2.43403187115467 -1.524935630121 -0.586513703892691 -0.146628425973173 1.43695857453709 -1.23167877817465 -0.410559592724884 NA NA -0.325 1.225 0.325 -0.481779113911854 0.809388911371914 0.539592607581276 0.359728405054184 0.809388911371914 -0.674490759476595 0.224830253158865 1.70870992400737 -0.674490759476595 0.404694455685957 NA NA NA NA NA NA NA NA NA NA NA NA 0.585741975334938 -0.869738084588241 -0.0532492704849943 -0.337245379738298 -0.224830253158865 0.674490759476595 2.38320068348397 -1.03421916453078 0.224830253158865 -0.989253113899006 -0.944287063267233 1.30401546832142 -1.07918521516255 -0.314762354422411 -0.944287063267233 -0.404694455685957 0.404694455685957 -0.494626556949503 -0.525 -0.025 -0.15 -0.613173417705996 -0.327025822776531 -0.694929873400128 -0.408782278470664 1.12415126579433 1.00151658225313 1.24678594933552 -0.245269367082398 -0.408782278470664 1.04239481010019 -0.490538734164797 -0.654051645553062 -0.183952025311799 0.0999245569594956 1.49886835439243 1.19909468351395 -1.19909468351395 0.0499622784797478 0.249811392398739 1.74867974679117 0.799396455675965 1.19909468351395 0.699471898716469 1.39894379743294 0.999245569594956 -1.39894379743294 -0.549585063277226 -0.149886835439243 1.19909468351395 0.999245569594956 -0.699471898716469 -0.699471898716469 2.79788759486588 NA 1.39894379743294 -2.14837797462916 0.599547341756973 -0.699471898716469 0.649509620236721 0.599547341756973 NA -1.54883063287218 1.64875518983168 -0.349735949358235 3.24754810118361 0 NA -0.749434177196217 -0.499622784797478 -0.599547341756973 5.79562430365074 -2.1983402531089 1.19909468351395 0.249811392398739 0.283996109253303 -0.192711645564741 NA -0.814040571782098 0.0232583020509171 -1.0931401963931 -0.2 0.134898151895319 1.04546067718872 1.14663429111021 NA NA 1.025 0.825 NA 0.025 -0.15 -0.15 0.191105715185035 NA 0.730698322766311 NA NA -1.34898151895319 -1.64875518983168 0.786905886056028 -0.149886835439243 -0.524603924037352 0.149886835439243 0.599547341756974 -0.262301962018676 -0.487132215177541 0.149886835439243 -0.824377594915839 -1.64875518983168 -0.112415126579433 -0.861849303775649 -0.412188797457919 -1.01173613921489 -0.187358544299054 -0.0374717088598109 0.224830253158865 1.42392493667281 0.299773670878487 -0.299773670878487 1.91105715185035 -0.262301962018676 -0.299773670878487 2.58554791132695 0 -0.562075632897163 -0.89932101263546 1.0492078480747 -1.91105715185035 -1.31150981009338 -1.386453227813 -0.299773670878487 -1.57381177211206 -1.31150981009338 -0.711962468336406 0.824377594915839 0 0.224830253158865 0.562075632897163 0.974264430355082 -0.44966050631773 -0.674490759476595 -0.637019050616784 0.0374717088598109 0.374717088598108 -0.711962468336406 1.61128348097187 1.53634006325224 2.51060449360733 2.24830253158865 0.224830253158865 0.674490759476595 0.562075632897163 -0.262301962018676 -2.24830253158865 0.187358544299054 2.47313278474752 1.19381697804073 -0.877154649647966 -0.262829732565997 1.03641263041526 3.09278689711219 4.35951344539751 2.51700210243705 -0.575784794675142 0.148058947202179 -2.40184514350202 0.143508672229063 0.143508672229063 -0.430526016687188 -1.43508672229063 0.129157805006156 -0.0911473999292697 -0.0182294799858539 0.273442199787809 -0.85 NA -0.425 -0.625 NA -0.23125397467769 0 0.346880962016535 0.809388911371914 1.36825268350966 NA -0.0421556724672872 NA -0.163604789138335 NA NA -0.8271039 -2.81603032168813 0.240790266550037 -0.674490759476595
RV3845 -0.550242461678275 -0.443743920708286 0.0887487841416573 -0.37274489339496 -0.940737111901566 -0.763239543618252 1.79272543966148 -0.0177497568283315 0.0177497568283315 -1.11823468018488 -0.763239543618252 -1.50872933040817 0.230746838768309 -0.585741975334938 -0.443743920708286 0.266246352424972 1.08273516652822 -0.294008792592362 1.12415126579433 0.294008792592362 -0.379401052205585 0.738727974664842 -0.160593037970618 0.289067468347112 0.674490759476595 -0.128474430376494 -0.578134936694225 -1.41321873414144 -1.57381177211206 3.01914911384762 -0.528351094923333 1.29277395566347 -2.84410270245964 -1.36022303161113 -0.708215297450425 0.168622689869149 0.505868069607446 -1.02297765187284 1.45015513287468 -0.168622689869149 1.06900422256668 -1.06900422256668 0.23185619857008 0.0210778362336436 -0.316167543504654 -0.484790233373803 0.337245379738298 1.81269391609335 1.05389181168218 -0.29508970727101 NA NA NA 0.632335087009308 -1.01173613921489 NA -0.505868069607446 0.379401052205585 0 -0.379401052205585 -0.65 0.25 -0.825 -1.83952025311799 -1.04239481010019 -0.950418797444293 -0.0306586708852998 2.75928037967698 3.12718443030058 3.24981911384178 -0.275928037967698 -0.0613173417705996 2.91257373410348 -0.582514746820696 -0.367904050623597 -1.44095753160909 -0.101173613921489 1.28153244300553 -0.741939835424255 0.404694455685957 -0.134898151895319 0.236071765816808 3.13638203156617 0 1.14663429111021 -0.101173613921489 0.505868069607446 -0.101173613921489 -1.14663429111021 0.168622689869149 -1.18035882908404 0 0.0674490759476595 0.236071765816808 0.202347227842979 1.18035882908404 -1.11290975313638 -0.0337245379738298 -0.236071765816808 0.978011601241063 0.708215297450425 1.34898151895319 -0.640766221502766 NA -1.68622689869149 0.809388911371914 0.101173613921489 NA -0.134898151895319 0.809388911371914 NA -1.38270605692702 1.48387967084851 0.134898151895319 -1.04546067718872 0.438418993659787 -1.07918521516255 -0.955528575925176 0.708215297450425 -0.55 0 -0.45 0.15 0.35 NA NA NA -2.65 1.6 0 0.722668670867781 -0.674490759476595 -2.36071765816808 0.379401052205585 0.337245379738298 -0.87287039461677 NA 0.624895850691551 -0.386840288523341 -0.734004650018648 -1.90444449734568 -2.02347227842979 0.753842613532665 -1.54736115409337 -0.39675927028035 0.0793518540560701 1.62671300814944 -0.7935185405607 -0.39675927028035 -0.07935185405607 -0.198379635140175 -0.595138905420525 -0.991898175700875 -1.70606486220551 -0.912546321644805 -0.55546297839249 0 1.07125002975695 0.63481483244856 2.85666674601852 1.26962966489712 -0.23805556216821 4.16597233794368 -0.23805556216821 -0.7935185405607 1.19027781084105 -0.0396759270280349 -0.277731489196245 -0.23805556216821 0.277731489196245 -1.11092595678498 -0.912546321644805 -1.94412042437372 -0.95222224867284 -1.19027781084105 -0.7935185405607 -0.31740741622428 0.39675927028035 0.833194467588735 -0.31740741622428 0.436435197308385 1.34898151895319 -0.63481483244856 -0.357083343252315 -0.31740741622428 -0.15870370811214 -0.833194467588735 -0.87287039461677 3.33277787035494 2.89634267304656 2.97569452710263 2.53925932979424 0.39675927028035 0.23805556216821 1.42833337300926 -0.71416668650463 0.119027781084105 0.198379635140175 1.70606486220551 0.350052166310638 -1.00746721035745 -0.623263613187234 1.71090338989185 0.871902689079501 NA 1.13511859521671 -0.674490759476595 -0.065803976534302 -0.246764912003632 0.32475481011836 0.89932101263546 -0.649509620236721 0.199849113918991 1.8977197639511 -0.517790886062841 1.02195569617666 0.0408782278470664 -0.65 0.887487841416573 0.25 0.25 1.34267786699547 -1.02749526910921 -0.0189109558731756 0.0189109558731756 -0.0693401715349772 -0.334093553759435 NA 0.107918521516255 1.18710373667881 -0.575257052035865 NA NA -0.103710171508227 -0.678715127490018 0.632917288112437 -0.899321012635461
RV3894C -0.143073797464732 -1.20590772148846 -0.143073797464732 0.429221392394197 -2.26874164551218 -2.67752392398285 -0.51097784808833 -0.183952025311799 1.57381177211206 -1.65556822780619 -1.53293354426499 -2.06435050627685 1.77820291134739 -0.347464936700064 0.224830253158865 0.388343164547131 1.12415126579433 NA NA NA -0.05 1.07418898731458 0.0999245569594955 -0.0249811392398739 1.29901924047344 0.5745662025171 -1.19909468351395 -1.92354772147029 -1.22407582275382 1.02422670883483 NA NA NA NA NA NA NA NA NA NA 1.1 -1.1 NA NA NA NA 0.858442784788394 0.306586708852998 1.31832284806789 NA NA -0.275928037967698 0.459880063279497 1.22634683541199 -0.797125443017794 0.766466772132494 -0.0613173417705995 -0.582514746820696 0 -0.0919760126558993 0.2 NA 0.1 NA NA NA NA NA NA NA NA NA NA NA NA NA -0.0919760126558993 1.25700550629729 NA -1.28766417718259 1.13437082275609 0.429221392394197 3.55640582269477 -0.0919760126558993 0.919760126558994 0.490538734164797 1.07305348098549 0.981077468329593 -2.69796303790638 -0.674490759476595 -1.59425088603559 -0.551856075935396 1.10371215187079 -0.275928037967698 -0.766466772132495 3.64838183535067 NA -0.643832088591295 0 1.13437082275609 0.766466772132495 0.490538734164797 NA NA -0.0919760126558993 0.459880063279497 -0.367904050623597 2.48335234170928 0.429221392394197 NA -0.398562721508897 -0.889101455673694 2.05413094931509 2.26874164551218 -0.643832088591295 -0.306586708852998 0 -0.661393851525593 0.567185411378046 -0.039675927028035 -0.674490759476595 0.039675927028035 0.833194467588735 0.4 1.44533734173556 0 1.0920326582002 NA 1.05 0.299773670878487 NA NA -0.674490759476595 -0.187358544299054 -0.786905886056028 NA NA NA NA NA -0.89932101263546 -1.55132874679617 0.89932101263546 0.0674490759476595 -0.179864202527092 1.46139664553262 1.07918521516255 -0.089932101263546 -1.03421916453078 0.427177481001844 -0.112415126579433 0.179864202527092 -1.91105715185035 -0.202347227842979 -0.764422860740141 -0.0224830253158865 NA 0.809388911371914 0.696973784792482 2.67548001259049 0.269796303790638 -0.0674490759476595 2.51809883537929 -0.786905886056028 -0.247313278474752 0.607041683528936 -0.044966050631773 0.134898151895319 -1.39394756958496 -0.202347227842979 -0.786905886056028 -1.30401546832142 -0.112415126579433 -0.809388911371914 NA -1.21408336705787 0.292279329106525 NA 0.719456810108368 -0.044966050631773 0.786905886056028 -0.404694455685957 -0.652007734160709 -0.96677008858312 -1.41643059490085 1.10166824047844 -1.23656639237376 -0.786905886056028 2.09092135437744 0.944287063267233 2.29326858222042 1.64126084805972 0.539592607581276 0.359728405054184 0.404694455685957 -0.629524708844822 -0.382211430370071 0.607041683528936 2.24830253158865 NA NA NA 1.61740131098979 0.887850081351845 2.66355024405553 1.81011295655454 -0.750198905948458 -0.364775614818975 -2.36071765816808 0.659276682195168 0.638991245819932 -0.537564063943753 -0.212997081939977 1.08298516310327 -0.734445493652293 -0.119909468351394 0.374717088598108 NA NA -0.457690158216261 0.650401803781003 NA NA NA NA NA NA NA NA NA 0 -0.45934339 NA NA -0.136633176356995 0.270345318193783 0
RV3895C NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.04239481010019 0.129157805006157 0.444876883910095 0.789297697259845 NA 0.932806369488908 -1.21982371394703 -0.358771680572657 -1.30592891728447 0.904104635043096 NA NA NA NA NA NA NA NA NA NA 0.933910282352209 -0.933910282352209 NA -0.1 -1.25 -0.15 1.02422670883483 2.62301962018676 3.09766126574436 -1.49886835439243 NA -0.799396455675965 NA 0.399698227837982 0.399698227837982 NA -0.0249811392398739 0 0.174867974679117 -1.12415126579433 -0.85 0.15 NA -0.880967522581675 -0.578134936694224 -1.18380010846913 0.110120940322709 1.37651175403387 1.59675363467929 0.82590705242032 0.165181410484064 1.12873963830777 0.0550604701613547 -0.578134936694224 -0.880967522581675 -1.10120940322709 -0.32258253714098 0.967747611422941 0.469210963114153 -1.524935630121 0.498536648308788 -0.263931166751711 1.55426131531563 1.20235309298002 3.049871260242 0.674490759476595 1.6129126857049 0.967747611422941 -1.99414659323515 -0.381233907530249 -1.524935630121 -0.351908222335615 1.31965583375856 -0.645165074281961 -0.645165074281961 2.05279796362442 NA -1.37830720414782 -1.37830720414782 1.31965583375856 1.67156405609417 1.26100446336929 -0.146628425973173 NA -1.29033014856392 0.645165074281961 -0.997073296617575 1.29033014856392 0.32258253714098 NA 0.586513703892691 0 1.14370172259075 1.87684385245661 -0.469210963114153 0.234605481557077 -0.615839389087326 NA -0.466955141176104 -0.590179414542021 -0.716646431943882 1.55975988128963 0.337245379738298 0 NA NA NA NA NA 1.34898151895319 1.50768522706533 0.119027781084105 -2.261527840598 -0.95 -0.95 NA NA NA NA NA -0.971266693646297 -1.78065560501821 0.91730743288817 -0.674490759476595 -0.21583704303251 1.13314447592068 0.56657223796034 -0.863348172130042 0.215837043032511 0.809388911371914 -0.647511129097531 -0.944287063267233 -1.88857412653447 -0.431674086065021 -1.29502225819506 -0.620531498718468 -1.13314447592068 1.40294077971132 0.91730743288817 0.485633346823149 0.188857412653447 -0.0269796303790638 NA 0.0809388911371914 -0.21583704303251 0.836368541750978 -0.539592607581276 -0.593551868339404 -1.72669634426008 0.971266693646297 -0.647511129097531 0.0269796303790638 NA NA NA -1.05220558478349 -0.188857412653447 0.404694455685957 2.21232969108323 0.485633346823149 0 NA 0 -0.458653716444085 -1.16012410629974 NA NA -0.593551868339404 1.78065560501821 1.21408336705787 2.88682045055983 3.10265749359234 0.512612977202212 0 1.10616484554162 -1.18710373667881 -0.944287063267233 0.620531498718468 1.80763523539727 0.587770518972461 -0.761210999980729 -0.774058443018378 NA NA NA NA NA NA NA 0.875015039320988 1.13022775912294 -0.51042543960391 -0.437507519660494 0.0134898151895319 -2.42816673411574 0.674490759476595 0 NA -0.375 NA NA NA -0.478275265810677 -0.649963822768355 0.699017696184835 1.28766417718259 2.8328611898017 10 NA NA 0 NA -0.529729119383079 0 -0.2025 0.511986605094703 -0.89932101263546
[+] Show/hide bicluster #175 motif PSSM #1. bicluster 175 motif PSSM #1 Mycobacterium tuberculosis H37Rv 7x4
POSITION A C G T
1 0 0 0 1
2 0 0.5 0.5 0
3 1 0 0 0
4 0 0 0 1
5 0 0 0 1
6 0 0 1 0
7 1 0 0 0 [+] Show/hide bicluster #175 motif PSSM #2. bicluster 175 motif PSSM #2 Mycobacterium tuberculosis H37Rv 12x4
POSITION A C G T
1 0 0.833333 0 0.166667
2 0.833333 0 0 0.166667
3 0.166667 0.833333 0 0
4 0 1 0 0
5 0 0.166667 0.833333 0
6 0.5 0 0.333333 0.166667
7 0 1 0 0
8 0.333333 0.5 0.166667 0
9 0 0 0.833333 0.166667
10 0 1 0 0
11 1 0 0 0
12 0.666667 0 0.333333 0 |