|
[+] Show/hide bicluster #186 rows and columns.
bicluster 186
Mycobacterium tuberculosis H37Rv
9x240
[+] Show/hide bicluster #186 rows (genes).
bicluster 186 genes
Mycobacterium tuberculosis H37Rv
9
[+] Show/hide bicluster #186 rows (short gene names).
bicluster 186 short names
Mycobacterium tuberculosis H37Rv
9
short_name
[+] Show/hide bicluster #186 rows (long gene names).
bicluster 186 long names
Mycobacterium tuberculosis H37Rv
9
long_name
[+] Show/hide bicluster #186 rows (NCBI RefSeq gene IDs).
bicluster 186 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
18
[+] Show/hide bicluster #186 gene upstream sequences.
bicluster 186 upstream sequences
Mycobacterium tuberculosis H37Rv
9
upstream
[+] Show/hide bicluster #186 columns (arrays; conditions).
bicluster 186 arrays
Mycobacterium tuberculosis H37Rv
240
[+] Show/hide bicluster #186 ratios.
bicluster 186 ratios
Mycobacterium tuberculosis H37Rv
9x240
GENES 2867:::H37Ra..Sauton.s.media.replicate.3 2867:::H37Ra..Youman.media.replicate.4 2867:::H37Rv..Sauton.s.media.replicate.2 2867:::H37Rv..Youman.media.replicate.3 2885:::H37Ra..7H9.roll.replicate.2 2885:::Strain.1006...replicate.1 2885:::Strain.3160...replicate.3 2885:::Strain.3160..replicate.1 2885:::Strain.3160..replicate.4 2885:::Strain.9802501..replicate.4 2885:::Strain.9802826..replicate.1 2885:::Strain.9802826..replicate.2 2885:::Strain.9802826..replicate.3 2885:::Strain.9802826..replicate.4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.5 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.2 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.4 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.1 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.2 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.4 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.1 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.2 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.05.mM.DETA.NO.rep.3 4062:::MTB1254.Day.0.rep.3 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.2 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.4 4084:::High.iron.wt.vs.high.iron.ideR.KO.1a 4084:::High.iron.wt.vs.high.iron.ideR.KO.2b 4084:::High.iron.wt.vs.low.iron.wt.3b 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.vs..MTB1254.rep3 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.1 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.5 4099:::H37Rv.hypoxia.2hr.rep.1 4101:::H37Rv.Day14.3 4101:::H37Rv.Day6.3 4107:::DIPED.10ug.mL.vs.DMSO.12h.2 4107:::EMB.10ug.mL.vs.DMSO.12h.2 4107:::pH4.8vspH6.8..5.5h. 4107:::pH4.8vspH6.8..6h. 4107:::pH5.6vspH6.8..11h. 4107:::Rif.0.5ug.mL.vsDMSO.2.5hA 4107:::WT.t.6h.WT.t.0h..2 4107:::X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050. 4107:::X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054. 4107:::X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046. 4107:::X0.12mg.mL.BZA.pH5.6..4h..1 4107:::X0.12mg.mL.BZA.pH5.6..4h..2 4107:::X0.12mg.mL.BZAvspH5.6..7h. 4107:::X0.12mg.mL.Nam.pH5.6..2h..1 4107:::X0.12mg.mL.Nam.pH5.6..4h..2 4107:::X0.12mg.mL.NamvspH5.6..5.5h. 4107:::X0.12mg.mL.PZA.pH5.6..2h. 4107:::X0.12mg.mL.PZAvspH5.6..4h. 4107:::X0.12mg.mL.PZAvspH5.6..4h.A 4107:::X0.12mg.mL.PZAvspH5.6..5.5h. 4107:::X0.12mg.mL.PZAvspH5.6..6h.A 4107:::X0.13mg.mL.TLMvsDMSO..6h 4107:::X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA 4107:::X0.1mMGSNO.5ug.mLKCNvsDMSO.6h.A 4107:::X0.2ug.mL.Mtmvsctrl..6h. 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.4mM.NaN3vsDMSO..4h 4107:::X0.5mM.DNP.DMSO..6h 4107:::X0.5ug.mL..111895vsDMSO..6h 4107:::X0.5uMValinomycinvsDMSO.6h 4107:::X1.2mg.mL.PZA.pH5.6..2h.. 4107:::X1.2mg.mL.PZA.pH5.6..5h. 4107:::X1.2mg.mL.PZAvspH5.6..4h. 4107:::X1.2mg.mL.PZAvspH5.6..4h.A 4107:::X1.2mg.mL.PZAvspH5.6..4h.B 4107:::X1.2mg.mL.PZAvspH5.6..6h. 4107:::X10ug.mL..59vsDMSO..6h 4107:::X10ug.mL.Nvb.DMSO..6h..3 4107:::X10ug.mL.PA.1vsDMSO..6h 4107:::X10ug.mL.PA.21vsDMSO..6hA 4107:::X10ug.mLMethoxatinvsDMSO.6h 4107:::X20ug.mL.Cephalexin.Ctrl..6h..2 4107:::X20ug.mLProcept6778vsDMSO.6hA 4107:::X25ug.mL.CPZvsDMSO..6h.B 4107:::X25ug.mLCPZ.0.1mMGSNO.DMSO..1 4107:::X25ug.mLCPZ.0.1mMGSNO.DMSO..2 4107:::X25ug.mLCPZ.0.1mMGSNO.DMSO..3 4107:::X2mMb.mercaptoethanolvsDMSO.6h 4107:::X2ug.mL..111895vsDMSO..6hB 4107:::X40ug.mL.5CL.pH5.6..2h..1 4107:::X40ug.mL.5CL.pH5.6..4h..1 4107:::X50ug.mL.PA.21vsDMSO..6hA 4107:::X50ug.mL.VerapamilvsDMSO..6h 4107:::X80ug.mL.5CL.pH5.6..2h. 4363:::H37Rv.hypoxia.4hr.rep.1 4363:::H37Rv.hypoxia.4hr.rep.3 4365:::H37Rv.diamide.1h.rep.4 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.1 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.5 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.3 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.4 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.2 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.4 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.5 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.3 4575:::Purified.Surfactant.Lipids.30min.rep.1 4583:::X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.4 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.1 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.2 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.3 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media.rep.3 4615:::AA_30uM_1h_04 4615:::AA_30uM_24h_T0_01 4615:::AA_30uM_30min_04 4615:::AA_60uM_24h_01 4615:::CK.4h.for.OA.NA.0.05mM 4615:::CK.AA.2h 4615:::CK.for.AA.Na.4h.2 4615:::CK.for.MDG.OA.Na.24h 4615:::ETYA_30uM_1h_01 4615:::L2A_30uM_10min_05 4615:::L2A_30uM_30min_04 4615:::L2A_30uM_4h_T0_02 4615:::MDG.MD.glycerol 4615:::MDGCy3.7H9Cy5.01 4615:::MDGCy3.7H9Cy5.02 4615:::MTB1248_PA50_1h_01 4615:::MTB1254_SDS_90MIN_01 4615:::MTB1254_SDS_90MIN_03 4615:::MTB1254.0485.1._PA_12h_02 4615:::MTB1254.0485.1._PA_4h_03 4615:::MTB1254.3524.1._OA_10min_04 4615:::MTB1254.3524.1._PA_12h_03 4615:::MTB1254.B4.1._PA_4h_03 4615:::MTB1254TA1_OA.30min_02 4615:::MTB1254whiB4_SDS_90MIN_01 4615:::MTB1254whiB4_SDS_90MIN_02 4615:::MTB1254whiB4_SDS_90MIN_03 4615:::MTB1254whiB4_SDS_90MIN_04 4615:::OA_50uM_10min_01 4615:::OA_50uM_4h_01 4615:::PA_10uM_10min_02 4615:::PA_300uM_2h_T0_01 4615:::PA_50uM_1h_03 4615:::PA_50uM_1h_11 4615:::PA_50uM_24h_01 4615:::PA_50uM_24h_02 4615:::PA_50uM_2h_02 4615:::PA_50uM_3d_02 4615:::PA_50uM_8h_06 4615:::PA_50uM.MAPP_4h_01 4615:::PA_50uM.OA_10uM_4h_04 4615:::PA_50uM.OA_30uM_30min_02 4615:::Rv_OA30_30mim_01 4615:::Rv_TA_OA30_30mim_03 4615:::Rv.MT106_100603_01 4615:::Rv.MT71_100803_01 4615:::Rv.MT96_100703_01 4615:::Rv.p0485.1._300uM.PA_10m 4615:::TBD094 4615:::TBE056 4615:::TBE735 4615:::WT_65.4_SDS_02 4615:::X2.2..Dipyridyl_0.2mM.Dpd.AA_50uM_01 4615:::X2.2..Dipyridyl_1mM_20min_01 4615:::X7H9_MTB1254_OA50_10M_01 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.2 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3 4638:::CDC1551.wild.type.vs.kstR.null.rep.1 4638:::CDC1551.wild.type.vs.kstR.null.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak24hr.rep.1 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.3 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1 4703:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.3 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.3 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.24.hr.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.4 4815:::H37Rv.reaeration.for.12hrs.rep.5 4815:::H37Rv.reaeration.for.1hrs.rep.3 4815:::H37Rv.reaeration.for.1hrs.rep.8 4815:::H37Rv.reaeration.for.24hrs.rep.1 4815:::H37Rv.reaeration.for.4hrs.rep.1 4815:::H37Rv.reaeration.for.6hrs.rep.5 4860:::M..bovis.nadABC.null.nicotinamide.starvation.rep.2 4928:::Mtb.Erdman.strain.2000.ppm.CO.rep.2 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.3 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2 Rohde_CellHostMicrobe2007:::CDC1551.ctrl..vs.2.hr.after.macrophage.infection Rohde_CellHostMicrobe2007:::CDC1551.ctrl.vs.pH.6.5.7H9.broth.for.2.hr
RV2565 NA 0.719456810108368 NA 0.179864202527092 -0.795899096182382 -0.526102792391744 -1.03871576959396 -1.20059355186834 -0.229326858222042 0.661000944287063 0.0134898151895319 0.445163901254553 1.14663429111021 0.148387967084851 -0.5 0.889753767820189 0.143508672229063 0.574034688916251 0.660139892253689 0.401824282241376 -0.545332954470439 -0.0861052033374377 -0.11480693778325 0 0.143508672229063 0.459227751133001 0.143508672229063 -1.09066590894088 0.0287017344458126 -0.975858971157627 -0.373122547795563 -2.12392834899013 -3.07108558570194 -1.86561273897782 -1.80820927008619 -1.43508672229063 -1.377683253399 -2.03782314565269 -0.889753767820189 -0.200912141120688 2.21003355232757 -1.52119192562807 -0.200912141120688 -1.26287631561575 -1.26287631561575 0.459227751133001 0.11480693778325 0 -0.11480693778325 0.229613875566501 0.430526016687188 NA 0.1 0.3 -0.9 -1.52884572148028 -0.404694455685957 -0.44966050631773 -0.134898151895319 NA -0.2 -0.4 1.28574801025226 0.29508970727101 0.175954111167807 1.11437603739611 -1.23167877817465 -2.11144933401369 -0.70381644467123 0.997073296617576 0.469210963114153 0.498536648308788 0.32258253714098 -0.0293256851946345 -1.26100446336929 -0.527862333503422 0.498536648308788 -1.26100446336929 -0.674490759476595 -0.146628425973173 -0.909096241033672 -0.557188018698057 -1.05572466700684 -0.175954111167807 -1.08505035220148 -0.146628425973173 0.469210963114153 0.527862333503422 -1.34898151895319 0.205279796362442 0.498536648308788 0.263931166751711 -0.0586513703892691 -0.439885277919519 -2.14077501920832 -1.23167877817465 -1.23167877817465 -0.498536648308788 -3.2258253714098 -1.64223837089954 0.205279796362442 -0.469210963114153 0.146628425973173 0.527862333503422 1.02639898181221 0.557188018698057 0.381233907530249 -0.175954111167807 0.117302740778538 -0.615839389087326 1.11437603739611 0.762467815060499 0.0586513703892692 -1.46628425973173 -0.674490759476595 -0.175954111167807 0.967747611422941 NA 0.573317145555106 -0.522730338594361 -0.25 0.4 0 NA NA NA 1 0 0.168622689869149 -0.101173613921489 0.843113449345744 0.303520841764468 -0.674490759476595 NA NA NA NA NA NA -0.590179414542021 -0.421556724672872 NA -0.815009667700886 0.477764287962588 0.786905886056028 1.40518908224291 0.337245379738298 NA 1.40518908224291 0.0562075632897163 -0.0281037816448581 NA 2.72606681955124 1.93916093349521 -0.365349161383156 -0.786905886056028 -0.815009667700886 -0.562075632897163 -0.843113449345744 0 -0.75880210441117 0.196726471514007 0.89932101263546 -1.71433068033635 -0.646386977831737 -0.281037816448581 -1.15225504743918 0.224830253158865 0.44966050631773 -0.505868069607446 -1.68622689869149 -0.590179414542021 -1.09604748414947 NA NA -0.337245379738298 1.18035882908404 -2.64175547461666 0.112415126579433 0.477764287962588 0.0281037816448581 -1.63001933540177 -0.252934034803723 0.646386977831737 0.75880210441117 1.5457079904672 0.112415126579433 0.702594541121453 0.815009667700886 -0.168622689869149 0.983632357570035 0.75880210441117 0.196726471514007 1.12415126579433 -0.75880210441117 1.46701740186159 -0.134898151895319 -1.12415126579433 -0.108251603372787 0.0685922806247385 -0.685922806247385 -1.05174830291266 0.0999999999999998 0.3 -1.1 0.15 0.15 0.846701166151471 -0.50228035280172 0.760595962814033 0.760595962814033 0.652007734160709 -0.96677008858312 0.921804037951347 0.741939835424255 NA 0 -0.25 0.15 NA -0.1 -0.15 1.55 -0.0421556724672872 -0.330362820968128 -0.770846582258966 1.01861869798506 -0.210778362336436 1.09604748414947 NA -0.779879940644813 0.189700526102792 -0.316167543504654 NA 0.075 0.273281435 0.444314112564594 -1.37663577519984 0.134935222011256 -2.33912431563469
RV2774C -0.791793500255134 1.7008897412888 0.586513703892691 2.05279796362442 0.0421556724672872 -0.0843113449345745 -0.379401052205585 -0.126467017401862 -0.590179414542021 0.168622689869149 0 1.18035882908404 0.126467017401861 0.463712397140159 -2.15 -0.128474430376494 0.224830253158865 0.513897721505977 0.0321186075941236 0.931439620229584 0.674490759476595 0.642372151882472 1.50957455692381 0.610253544288348 0.931439620229584 -0.256948860752989 0 -1.6380489873003 -0.385423291129483 -1.41321873414144 -0.160593037970618 -1.05991405060608 -1.15626987338845 -2.56948860752989 -2.08770949361803 -1.99135367083566 -1.2205070885767 -0.706609367070719 -0.385423291129483 -0.192711645564741 1.0920326582002 -0.963558227823707 -0.224830253158865 -0.738727974664842 -1.60593037970618 0.513897721505977 0.160593037970618 0.256948860752989 -1.02779544301195 0.0642372151882472 0.0642372151882472 NA 0.675 0.075 -0.775 1.55975988128963 0.266985925626152 -0.491816178785017 1.27872206484104 NA NA NA NA NA 1.01173613921489 0 -0.891291360736929 -0.433601202520668 0.698579715172188 1.13218091769286 NA 0.722668670867781 0.0963558227823708 0.313156424042705 0 -0.62631284808541 -0.457690158216261 -0.433601202520668 -0.0963558227823707 -0.674490759476595 -0.819024493650151 -1.42124838603997 -0.963558227823707 -0.722668670867781 -0.529957025303039 1.49351525312675 0.481779113911854 0.409512246825076 -0.722668670867781 -1.15626987338845 -0.578134936694224 2.3125397467769 -0.481779113911854 0.0963558227823708 -1.61396003160471 0.722668670867781 -1.44533734173556 -1.6380489873003 0.168622689869149 -0.457690158216261 NA 0.481779113911854 0.409512246825076 NA -0.168622689869149 -0.240889556955927 NA 1.15626987338845 1.92711645564741 1.03582509491049 0.9876471835193 0.457690158216261 -0.602223892389817 0.0722668670867781 -0.578134936694224 NA 0.0481779113911854 -0.505868069607446 NA NA 0.85 -0.3 0.05 -0.972521560175556 NA NA NA NA NA 0.025 NA 0.425 -0.687217000221437 NA NA NA NA NA NA -0.610253544288348 0.224830253158865 -0.353304683535359 1.0920326582002 0.160593037970618 0.89932101263546 0.224830253158865 -0.289067468347112 3.14762354422411 1.60593037970618 -0.706609367070719 2.05559088602391 NA 0.128474430376494 0.44966050631773 -0.44966050631773 -2.40889556955927 -2.24830253158865 0.353304683535359 -0.770846582258966 0.0963558227823707 -0.0642372151882472 -0.706609367070719 1.7665234176768 -0.160593037970618 -0.256948860752989 0.224830253158865 -0.385423291129483 1.2205070885767 0.578134936694224 -0.417541898723607 -0.963558227823707 0.128474430376494 -1.25262569617082 -0.481779113911854 NA 0.192711645564741 NA -0.80296518985309 -0.385423291129483 -0.738727974664842 -1.6380489873003 NA -1.31686291135907 0.481779113911854 1.67016759489443 2.02347227842979 0.578134936694224 -0.192711645564741 0.706609367070719 -1.28474430376494 -0.0321186075941236 1.12415126579433 0.513897721505977 0.256948860752989 -0.125 2.125 0.125 -0.948805183187172 -0.380812964680566 0.269796303790638 0.434020140880592 NA -0.1 0.35 -0.3 0.6 -0.35 0.218217598654193 -1.44817133652328 1.52752319057935 0.575300941906508 0.553082422770808 0.0134898151895319 -0.0134898151895319 1.74018615944962 0 NA NA NA NA NA NA NA -2.30602921821052 -0.800957776878457 NA 0.0843113449345744 NA NA NA NA NA NA -0.705404919285939 -0.0749434177196216 NA NA NA 0.506951762987068 -1.80868425058875
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RV3314C NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.069178539433497 0.674490759476595 0.500428627998764 -0.805037358084968 -0.848552890954426 1.50128588399629 0.369882029390391 0.761521825215511 0.674490759476595 -0.326366496520933 0.456913095129307 0.0217577664347289 -0.19581989791256 -1.06613055530172 -0.326366496520933 -2.54565867286328 -2.1105033441687 0.239335430782018 0.152304365043102 -0.326366496520933 -1.45777035112683 -1.19667715391009 -3.63354699459972 -1.24019268677955 -1.89292567982141 0.282850963651475 0.456913095129307 -3.15487613303569 2.63268973860219 -1.37073928538792 0.630975226607137 0.413397562259849 0.500428627998764 0.369882029390391 -1.76237908121304 1.45777035112683 -0.761521825215511 NA 0.65 0.55 -1.3 -0.165181410484064 -0.220241880645419 -0.0825907052420321 1.07367916814642 0.805641740485933 -0.505868069607446 0.393452943028014 -0.337245379738298 0.463712397140159 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 0.05 2.75 NA -0.65 -0.385423291129483 0.62631284808541 -0.0481779113911854 0.3 0.4 NA NA -1.12920363103385 -0.05 NA NA NA NA NA -0.337245379738298 -0.487132215177541 -0.711962468336406 1.53634006325224 0.0749434177196217 0.224830253158865 0.786905886056028 0.0749434177196217 1.91105715185035 -0.299773670878487 -0.562075632897163 -0.0749434177196217 NA 0.112415126579433 1.46139664553262 -1.64875518983168 -3.37245379738298 -3.29751037966335 -0.89932101263546 -1.08667955693451 0.337245379738298 -1.57381177211206 -0.89932101263546 1.79864202527092 -2.69796303790638 -0.861849303775649 -1.01173613921489 -1.61128348097187 0.824377594915839 0.89932101263546 -0.412188797457919 -1.87358544299054 -0.562075632897163 -2.69796303790638 -0.674490759476595 NA -0.0374717088598109 0.374717088598108 -1.12415126579433 -1.23656639237376 -0.44966050631773 -0.749434177196217 -3.82211430370071 -1.49886835439243 0.824377594915839 1.27403810123357 0.112415126579433 0.599547341756974 1.0492078480747 1.79864202527092 -0.337245379738298 NA 0.374717088598108 0.0374717088598109 0.44966050631773 -0.164065319872685 1.84117747857125 0.164065319872685 -0.808074968333973 -0.759897056942787 -0.371458679132038 0.166178882769596 -0.136853197574961 -0.145835839886831 0.83855607934928 -1.09376879915124 1.20314567906636 0.51042543960391 -0.277022990499316 -0.397467768977279 2.6377406486674 -0.686535237324392 -0.102454292578723 -0.290287162306383 1.10992150293617 0.956240064068084 -1.02639898181221 -0.3 -1.15 0.25 -0.3 -1.8 NA 2.5 -1.50872933040817 NA NA NA NA NA NA NA NA NA NA -0.35 NA 1.029640445 NA 0 -1.10467247011912
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RV3317 -1.1 1.4 -0.05 1.65 -0.265373413564562 1.19418036104053 -0.221144511303802 NA 0 0.818234691824066 0.574975729389885 1.72492718816965 1.08360810538863 1.17206590991015 -0.770846582258966 0.55546297839249 -0.039675927028035 -0.595138905420525 -0.119027781084105 1.19027781084105 0.912546321644805 0.31740741622428 0.7935185405607 0.95222224867284 1.07125002975695 1.66638893517747 0.753842613532665 -1.26962966489712 -0.39675927028035 -0.753842613532665 -0.277731489196245 -0.55546297839249 -2.34087969465407 -2.06314820545782 -3.92791677577547 0.277731489196245 -1.15060188381302 -1.07125002975695 -0.55546297839249 -0.674490759476595 -0.595138905420525 -0.63481483244856 0.674490759476595 -0.15870370811214 -1.22995373786909 0.674490759476595 0.55546297839249 0.595138905420525 -1.19027781084105 0.39675927028035 -0.15870370811214 -1.1491324050342 0.375 1.025 -0.325 -1.25783411902392 -0.528654919589764 -1.25783411902392 1.36721099893904 0.475 -0.375 -1.375 1.50315083540498 2.71723420246286 1.6621379429959 0.578134936694224 -1.46942629743115 -0.505868069607446 0.36133433543389 1.58987107590912 1.27671465186641 1.15626987338845 0.0240889556955926 0.385423291129483 -0.505868069607446 -0.698579715172188 -0.794935537954559 -1.30080360756201 -0.289067468347112 -1.39715943034438 -0.0481779113911854 -1.95120541134301 -1.13218091769286 -1.18035882908404 -0.602223892389817 0.602223892389817 0.192711645564741 1.13218091769286 -0.168622689869149 -0.794935537954559 0.240889556955927 0.915380316432522 0.602223892389817 -0.313156424042705 -1.39715943034438 -0.9876471835193 -1.61396003160471 -2.19209496829893 -1.25262569617082 -1.22853674047523 -0.0481779113911854 -0.674490759476595 0.698579715172188 0.385423291129483 0.337245379738298 -0.505868069607446 -0.578134936694224 0.0240889556955926 0.819024493650151 0.698579715172188 1.20444778477963 0.843113449345744 -0.698579715172188 -0.192711645564742 -0.457690158216261 1.22853674047523 0.481779113911854 -0.963558227823707 0.065575490504669 -0.815009667700886 0.706609367070719 -1.60593037970618 0.321186075941236 -0.1 0.1 NA NA NA 0.969580466747606 1.6440712262242 -0.674490759476595 1.05389181168218 -0.719456810108368 0.0697749061527512 NA -0.592734303782463 -0.306586708852998 NA -0.306586708852998 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.39163979582512 0.913826190258613 -0.913826190258613 -0.68020678286199 -0.920279765048575 0.30736287773617 0.836710056059574 -0.61472575547234 0.279099624611005 0.837298873833015 -1.02336529024035 0.372132832814673 0.976848686138517 1.05497272636083 0.0172946348583742 -0.224830253158865 0.743669298910092 1.01173613921489 -0.62631284808541 1.34898151895319 0.578134936694225 -0.2 -0.6 0.4 0.2 -0.3 -0.9 -0.15 3.65 -1.51945720541431 -1.26467017401862 -1.03281397544854 0.505868069607446 NA 0.417541898723606 -0.353304683535359 -0.192711645564742 0.224830253158865 NA 0.0932806369488908 -0.224830253158865 NA 0 -1.511707945 0.479 -0.9945
RV3318 -0.44966050631773 NA 1.34898151895319 0.0321186075941236 -0.638991245819932 0.816488814103247 0.141998054626652 -1.02948589604322 -0.354995136566629 0.674490759476595 0.319495622909966 1.06498540969989 2.05897179208645 2.59146449693639 -1.08173046331152 0.610253544288348 0.192711645564741 -1.6380489873003 -1.31686291135907 0.481779113911854 -0.0321186075941236 0.674490759476595 1.44533734173556 0.0963558227823707 0.706609367070719 0.770846582258966 0.513897721505977 -0.738727974664842 0.353304683535359 -1.7665234176768 -0.867202405041337 1.02779544301195 0.160593037970618 -0.706609367070719 -1.6380489873003 -0.80296518985309 -0.610253544288348 -0.674490759476595 -0.44966050631773 0.481779113911854 0.192711645564741 -0.80296518985309 1.05991405060608 -0.738727974664842 NA 0.89932101263546 0.867202405041337 0.80296518985309 -1.67016759489443 1.12415126579433 -1.41321873414144 NA 0.7 -0.25 -0.5 -0.638991245819932 -0.709990273133258 -0.0709990273133258 -0.638991245819932 -0.125 0.125 -0.425 1.79864202527092 2.62301962018676 0.737724268177526 0.400478888439228 0.23185619857008 -1.28574801025226 0.23185619857008 -0.126467017401862 -0.0210778362336436 0.29508970727101 NA 0.421556724672872 -1.05389181168218 -1.22251450155133 -1.62299338999056 -0.8220356131121 -2.4661068393363 -1.41221502765412 -1.43329286388776 -1.79161607985971 -2.67688520167274 -0.674490759476595 -1.07496964791582 0.779879940644813 0.716646431943882 1.11712532038311 -0.126467017401862 -0.421556724672872 NA 0.569101578308377 0.442634560906516 -1.4965263725887 -0.779879940644813 -1.01173613921489 -2.29748414946715 -2.69796303790638 -2.23425064076622 -1.03281397544854 0.484790233373803 -1.28574801025226 0.906346958046675 1.09604748414947 0.590179414542021 -0.252934034803723 -0.590179414542021 1.34898151895319 1.1592809928504 0.590179414542021 0.379401052205585 0.653412923242952 -0.590179414542021 -1.01173613921489 -2.61365169297181 0.800957776878457 0.463712397140159 -0.843113449345744 0.511682645120176 -0.860557175883932 1.6 -0.45 1.25 0 -1.25 NA NA NA 1.32854240502966 0.919760126558993 0.245269367082398 NA -0.377257543436062 -0.0240889556955927 0.794935537954559 -1.02522595440442 -0.107918521516255 NA -0.575565448086694 NA 0.0652732993041866 -0.0870310657389155 1.58831694973521 0.369882029390391 0.609217460172409 0.739764058780782 -0.304608730086204 1.10964608817117 0.979099489562799 NA 0.892068423823884 0.848552890954426 1.32722375251846 1.37073928538792 -1.58831694973521 -1.67534801547412 -1.1314038546059 -0.652732993041866 -1.39249705182265 0.261093197216746 -1.69710578190885 -1.06613055530171 1.76237908121304 -1.52304365043102 0.0435155328694577 -1.10964608817117 -1.17491938747536 0.304608730086204 0.217577664347289 -0.826795124519697 -1.45777035112683 0 -1.19667715391009 -2.13226111060343 NA -0.39163979582512 0.282850963651475 -0.369882029390391 -0.674490759476595 0.0870310657389155 -0.261093197216747 -0.435155328694577 -0.152304365043102 0 -0.108788832173644 2.08874557773397 0.456913095129306 0.543944160868222 0.674490759476595 0.217577664347289 1.17491938747536 0.95734172312807 -0.19581989791256 0.674490759476595 0.15 5.15 -1.3 -0.932108757887795 -0.416872761065396 0.713033088589544 0.199135367083566 -1.39394756958496 0.21160494414952 0.97867286669153 -1.13737657480367 0.66126545046725 1.53413584508402 0.965447557682185 -1.86476857031764 -0.0396759270280349 0.462885815327075 -0.628502753148646 -0.935089462001644 0.720478765804545 0.260598702525048 -0.5 -1.26467017401862 -0.969580466747606 -0.126467017401862 -0.29508970727101 -1.05389181168218 NA 4.76359098880345 0.127262407448414 -0.894997353920867 -0.635577831045253 0.453984165032324 NA NA NA NA NA NA NA -0.927424794280318 0.674490759476595 -0.0289749997124407 0.0289749997124407 0.27825 -3.45625
RV3319 -0.654051645553062 0.367904050623597 0.0817564556941327 1.75776379742385 0.393452943028014 1.43329286388776 -0.758802104411169 -1.43329286388776 -0.421556724672872 0.702594541121453 0.0843113449345745 1.63001933540177 1.43329286388776 1.85484958856064 -0.0632335087009308 0.551856075935396 0.459880063279497 -1.07305348098549 -0.183952025311799 0.613173417705996 0.459880063279497 1.04239481010019 1.01173613921489 0.429221392394197 1.25700550629729 1.22634683541199 0.582514746820696 -0.521197405050096 0.0306586708852998 -0.950418797444293 -0.275928037967698 -0.459880063279497 -1.41029886072379 -2.08478962020039 -2.39137632905338 -0.521197405050096 -1.31832284806789 -1.04239481010019 -0.827784113903094 -0.643832088591295 0.981077468329593 -0.919760126558994 0.521197405050096 -1.96215493665919 -1.34898151895319 0.459880063279497 0.429221392394197 0.797125443017794 -1.74754424046209 1.01173613921489 0.0306586708852998 -0.864191285579388 0.325 0.075 -0.425 0.379401052205585 -0.60423130536445 0.210778362336436 0.548023742074734 NA NA NA NA NA 0.415071236600982 0.933910282352209 -0.518839045751227 -0.830142473201963 0.518839045751227 0.276714157733988 1.03767809150245 0.380481966884233 0.864731742918712 0.103767809150245 0.069178539433497 -1.62569567668718 -0.44966050631773 -1.48733859782018 -1.72946348583742 -0.795553203485215 -1.72946348583742 -0.44966050631773 -0.276714157733988 -0.0345892697167485 -0.311303427450736 0.44966050631773 1.24521370980294 0.484249776034479 -0.484249776034479 -1.38357078866994 0.830142473201963 0.415071236600982 0.691785394334969 -0.864731742918712 -0.864731742918712 0.622606854901472 -0.276714157733988 0.345892697167485 -1.27980297951969 0.726374664051718 0.691785394334969 -1.59110640697043 1.69487421612067 1.66028494640393 1.0722673612192 -0.553428315467976 -0.138357078866994 1.10685663093595 1.31439224923644 0.311303427450736 1.00308882178571 1.38357078866994 -1.66028494640393 -1.34898151895319 -0.242124888017239 1.38357078866994 0.622606854901472 -0.795553203485215 1.38270605692702 -0.387832186699042 0.55 -1.35 1 -0.3 -0.385423291129483 -0.05 0.45 0.05 1.60191555375691 1.77053824362606 0.548023742074734 0 -1.33810263573583 1.12415126579433 NA -0.797125443017794 -0.766466772132495 0.950418797444293 -0.122634683541199 -0.861849303775649 -0.224830253158865 -0.674490759476595 0.936792721495271 1.27403810123357 1.34898151895319 1.34898151895319 1.01173613921489 1.27403810123357 0.786905886056028 0.337245379738298 1.27403810123357 1.19909468351395 0.786905886056028 0.599547341756974 -1.23656639237376 -2.66049132904657 -2.47313278474752 -0.89932101263546 -1.386453227813 0.524603924037352 -2.0609439872896 -1.386453227813 2.0609439872896 -2.32324594930827 -1.31150981009338 -0.974264430355082 -0.674490759476595 1.57381177211206 2.0609439872896 0 -0.0374717088598108 -0.674490759476595 -1.87358544299054 -1.76117031641111 -2.13588740500922 -0.974264430355082 0.89932101263546 -0.599547341756974 -1.76117031641111 -0.262301962018676 -0.861849303775649 NA -1.01173613921489 1.76117031641111 NA 1.79864202527092 0.337245379738298 1.34898151895319 1.27403810123357 -0.674490759476595 1.94852886071016 0 1.0492078480747 0.562075632897163 -0.639901489759847 1.78134739041255 -0.363187332025859 -0.741303523387013 -0.334063819552087 0.831871936687801 -0.337245379738298 -1.03421916453078 0 1.01173613921489 -0.815009667700886 0.533971851252305 1.63001933540177 0.788811227184493 -0.697354853018175 2.229249120304 -0.148616608020267 0.684126341754832 0.414330037964194 0.799753329093677 0.741939835424255 NA -1.5 -0.55 0.5 0.3 -0.75 -0.35 5.7 -0.419683139229882 0.369882029390391 -0.630975226607137 0.543944160868222 NA NA NA NA NA NA -1.54883063287218 -0.149886835439243 NA 1.418086435 -0.60592043 1.22825 -2.78425
[+] Show/hide bicluster #186 motif PSSM #1. bicluster 186 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 1 0 0
2 0 0.8 0 0.2
3 0.4 0.2 0 0.4
4 1 0 0 0
5 0 0 0.4 0.6
6 0 0.4 0 0.6
7 0 0.2 0 0.8
8 1 0 0 0
9 0.4 0.2 0.4 0
10 0 0 1 0
11 0 0.8 0 0.2
12 0 0 0 1
13 0 0.6 0 0.4
14 0 0 0.4 0.6
15 0.8 0 0 0.2
16 0.6 0 0 0.4
17 0 0 0 1
18 0 0.2 0.8 0
19 0.4 0.6 0 0
20 0 0.6 0 0.4
21 0.2 0.8 0 0
22 0.2 0.4 0.4 0
23 0 0 1 0
24 0.4 0.6 0 0 [+] Show/hide bicluster #186 motif PSSM #2. bicluster 186 motif PSSM #2 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0.6 0 0 0.4
2 0.8 0.2 0 0
3 0 0 0 1
4 0 1 0 0
5 0 0 1 0
6 1 0 0 0
7 0.4 0 0 0.6
8 0 1 0 0
9 0.4 0 0.6 0
10 0 0 1 0
11 0 0.4 0.2 0.4
12 0 0 0 1
13 0.4 0 0.2 0.4
14 0 0 0.8 0.2
15 0.6 0 0.4 0 |