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[+] Show/hide bicluster #211 rows and columns.
bicluster 211
Mycobacterium tuberculosis H37Rv
10x243
[+] Show/hide bicluster #211 rows (genes).
bicluster 211 genes
Mycobacterium tuberculosis H37Rv
10
[+] Show/hide bicluster #211 rows (short gene names).
bicluster 211 short names
Mycobacterium tuberculosis H37Rv
10
short_name
[+] Show/hide bicluster #211 rows (long gene names).
bicluster 211 long names
Mycobacterium tuberculosis H37Rv
10
long_name
[+] Show/hide bicluster #211 rows (NCBI RefSeq gene IDs).
bicluster 211 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
18
[+] Show/hide bicluster #211 gene upstream sequences.
bicluster 211 upstream sequences
Mycobacterium tuberculosis H37Rv
10
upstream
[+] Show/hide bicluster #211 columns (arrays; conditions).
bicluster 211 arrays
Mycobacterium tuberculosis H37Rv
243
[+] Show/hide bicluster #211 ratios.
bicluster 211 ratios
Mycobacterium tuberculosis H37Rv
10x243
GENES 2867:::H37Ra..Sauton.s.media.replicate.1 2867:::H37Ra..Sauton.s.media.replicate.2 2867:::H37Ra..Sauton.s.media.replicate.3 2867:::H37Rv..Sauton.s.media.replicate.4 2885:::Strain.1006...replicate.3 2885:::Strain.1006...replicate.4 2885:::Strain.3160..replicate.1 2885:::Strain.9700665..replicate.1 2885:::Strain.9800608..replicate.2 2885:::Strain.9802501..replicate.3 4055:::H37Rv.Vs.M.bovis.rep1 4055:::H37Rv.Vs.M.bovis.rep2 4055:::H37Rv.Vs.M.bovis.rep3 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.1 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.3 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.2 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.4 4082:::H37Rv.wild.type.Vs.Rv3676.null.7 4082:::Rv3676.null.Vs.H37Rv.wild.type.7 4084:::High.iron.wt.vs.high.iron.ideR.KO.1a 4084:::High.iron.wt.vs.high.iron.ideR.KO.3a 4084:::High.iron.wt.vs.high.iron.ideR.KO.3b 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.3 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.5 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.1 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.2 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.5 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3 4099:::H37Rv.hypoxia.2hr.rep.1 4099:::H37Rv.hypoxia.2hr.rep.3 4100:::H37Rv.0.2..Oxygen..2h..1 4101:::NRP.Day14..1 4101:::NRP.Day14..2 4101:::NRP.Day14..8 4101:::NRP.Day14..9 4107:::DIPED.50ug.mL.vs.DMSO.12h.1 4107:::pH5.2vspH6.8..5.5h. 4107:::Succinate.7H9.based.medium..1 4107:::Succinate.7H9.based.medium..2 4107:::WT.t.0h.WT.t.6h..2 4107:::WT.t.6h.WT.t.0h..2 4107:::X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051. 4107:::X.241..10ug.mL..DMSO..12h..2 4107:::X0.13mg.mL.TLMvsDMSO..6h 4107:::X0.1mg.mL.TriclosanvsEtOH..6hA 4107:::X0.1mM.GSNO.DMSO..3.5h 4107:::X0.1mM.GSNO.DMSO..6h 4107:::X0.1mMGSNO.5ug.mLKCNvsDMSO.6h 4107:::X0.1ug.mL.RifpvsEtOH..6h 4107:::X0.1ug.mL.RifpvsEtOH..6hA 4107:::X0.2ug.mL.Mtm.ctrl..4h...1 4107:::X0.2ug.mL.Mtm.ctrl..4h...2 4107:::X0.2ug.mL.Mtmvsctrl..6h. 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.2ug.mL.PA824.DMSO..6h..2 4107:::X0.32ug.mL.CervsEtOH..6h 4107:::X0.32ug.mL.CervsEtOH..6hA 4107:::X0.4mM.NaN3.DMSO 4107:::X0.4ug.mL.PA824.DMSO..6h..2 4107:::X0.5ug.mL.CeruleninvsDMSO..6hA 4107:::X0.5ug.mL.CeruleninvsDMSO..6hC 4107:::X0.5ug.mLRifapentinevsEtOH.6h 4107:::X1.2mg.mL.PZAvspH5.6..7h.A 4107:::X1.ug.mL..111891vsDMSO..6h 4107:::X100ug.mL.TriclosanvsEtOH..6h 4107:::X100ug.mL.TriclosanvsEtOH..6hA 4107:::X100uM.DCCD.DMSO..6h 4107:::X100uM.DipyridylvsCtrl..6hA 4107:::X10ug.mL.ClotrimvsEtOH..6hA 4107:::X10ug.mL.EconazolevsEtOH..6hA 4107:::X10ug.mL.LevovsEtOH..6hA 4107:::X10ug.mL.PA.1vsDMSO..6hA 4107:::X10ug.mL.PA.21vsDMSO..6h 4107:::X12ug.mLEthionamidevsEtOH.6hA 4107:::X130ug.mL.TLMvsDMSO..6h 4107:::X130ug.mL.TLMvsDMSO..6hA 4107:::X13ug.mL.clfzine.DMSO..6h..1 4107:::X150uM.Deferroxaminevsctrl..6hA 4107:::X1mM.DNP.DMSO..6h..1 4107:::X1mM.DNP.DMSO..6h..2 4107:::X1ug.mL..111891vsDMSO..6h 4107:::X1ug.mL..111895vsDMSO..6h 4107:::X1ug.mL..111895vsDMSO..6hA 4107:::X1ug.mL..124196vsDMSO..6h 4107:::X1ug.mL..124196vsDMSO..6hA 4107:::X1ug.mL..241vsDMSO..6h 4107:::X20ug.mL.CPZvsDMSO..6h 4107:::X20ug.mL.CPZvsDMSO..6h.A 4107:::X20ug.mL.KCN.DMSO..6h 4107:::X24ug.mL.Econazole.DMSO..6h..2 4107:::X25ug.mLCPZ.0.1mMGSNO.DMSO..2 4107:::X25ug.mLCPZ.0.1mMGSNO.DMSO..3 4107:::X2mM.DTTvsDMSO..6h.A 4107:::X50ug.mLAntimycinAvsDMSO..6hB 4107:::X5ug.mLCFZ.0.1mMGSNOvsDMSO.A 4107:::X80ug.mL.5CL.pH5.6..2h. 4363:::H37Rv.hypoxia.4hr.rep.3 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.3 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.4 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.5 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.6 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.2 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.5 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.6 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6 4583:::X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.1 4583:::X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2 4583:::X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4583:::X130ug.ml.TLM.vs.DMSO.6hrs.rep.2 4583:::X5ug.ml.KCN.vs.DMSO.6hrs.rep.2 4615:::AA_10uM_2h_T0_01 4615:::AA_30uM_10m_01 4615:::AA_30uM_1h_05 4615:::AA_30uM_2h_02 4615:::AA_30uM_2h_03 4615:::AA_30uM_30min_06 4615:::AA_30uM_30min_08 4615:::AA_30uM_4h_01 4615:::aceatate.induction.1 4615:::Acetate.3mM.10m.05 4615:::Acetate.3mM.2h.05 4615:::Acetate.3mM.60m.04 4615:::CHP.AA.1h.1 4615:::CHP.AA.2h.1 4615:::CHP.AA.4h.1 4615:::CK_LA_2h 4615:::CK_PA.Na.24h.1 4615:::CK.1.2h.for.AA.NA.and.LA.NA 4615:::CK.for.MDG.24h.PA.NA 4615:::CK.PA.NA.2h.02..100901 4615:::CK.PA.NA.2h.3..101801 4615:::CK.PA.Na.4h.2 4615:::ETYA_30uM_10min.06 4615:::L2A_30uM_10min_02 4615:::L2A_30uM_10min_07 4615:::L2A_30uM_10min_08 4615:::LAA_50uM_10min_02 4615:::MTB1254.0485.1._LA_10m_01 4615:::MTB1254.0485.1._PA_10m_02 4615:::MTB1254.0485.1._PA_10m_03 4615:::MTB1254.B4.1._PA_10MIN_01 4615:::MTB1254.B4.1._PA_10MIN_02 4615:::MTB1254.B4.1._PA_30MIN_01 4615:::MTB1254.B4.1._PA_30MIN_02 4615:::OA_50uM_10min_02 4615:::OA_50uM_1h_09 4615:::OA_50uM_30min_03 4615:::OA_50uM_30min_07 4615:::OA_50uM_4h_06 4615:::PA_100uM_2h_T0_05 4615:::PA_25uM_2h_T0_01 4615:::PA_50uM_24h_T0 4615:::PA_50uM_2h_02 4615:::PA_50uM_2h_05 4615:::PA_50uM_2h_08 4615:::PA_50uM_2h_T0_01 4615:::PA_50uM_30min_09 4615:::PA_50uM_30min_10 4615:::PA_50uM_4h 4615:::PA_50uM_4h_01 4615:::PA_50uM_4h_06 4615:::Spe_100uM_30M_01 4615:::TBD092 4615:::Test.3 4615:::X2.BA_500uM_30min_01 4615:::X2.BA.1 4615:::X7h9.control.4h 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.2 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.3 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.2 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3 4703:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4731:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4731:::X10ug.ml.Ethambutol.vs.DMSO.12hrs.3 4731:::X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4731:::X5ug.ml.Rifampicin.vs.DMSO.2.5hrs 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.3 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1 4802:::H37Rv.ctrl.vs.relE1.overexpression.24.hr.rep.1 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.3 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.2 4815:::H37Rv.reaeration.for.4hrs.rep.8 4815:::H37Rv.reaeration.for.6hrs.rep.3 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.1 4860:::M..bovis.nadABC.null.nicotinamide.starvation.rep.1 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1
RV0022C NA NA NA NA 0.195247325111646 NA -0.674490759476595 -0.479243434364949 0.834238570931578 -0.212997081939977 0 -0.915380316432522 NA 0.234605481557077 -1.31965583375856 0.0586513703892691 -0.674490759476595 -1.02639898181221 2.11144933401369 1.02639898181221 -0.615839389087326 -0.263931166751711 -0.32258253714098 0.615839389087326 -0.615839389087326 0.469210963114153 -1.64223837089954 NA NA NA 0 0.236071765816808 -0.236071765816808 -0.843113449345744 -1.11290975313638 -1.7030891676784 -1.29839471199245 -0.354107648725212 -1.36584378794011 -0.674490759476595 -0.893700256306489 -0.75880210441117 -1.06232294617564 -1.16349656009713 -0.65762849048968 0.961149332254148 0.0674490759476595 0.674490759476595 0.151760420882234 0.269796303790638 -0.0843113449345744 0.219209496829893 0.185484958856064 0.0843113449345744 0.269796303790638 -1.34898151895319 -0.0793518540560701 0 0.285361475163175 0 -0.233477570588052 -0.466955141176104 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.29508970727101 -2.2 NA NA NA NA NA NA -0.543339778467257 0.355981234168203 NA NA NA -0.580811487327068 -0.0187358544299054 -0.093679272149527 0.0187358544299054 2.32324594930827 -0.824377594915839 -1.01173613921489 0.539592607581276 -1.79864202527092 0.809388911371914 1.12415126579433 0 1.1691173164261 NA -1.05670218984667 -0.652007734160709 0.179864202527092 0.741939835424255 0.359728405054184 -0.382211430370071 -0.224830253158865 0.539592607581276 -0.269796303790638 -1.25904941768964 -0.134898151895319 -0.51710958226539 -0.944287063267233 -0.96677008858312 -1.14663429111021 -0.337245379738298 0.584558658213049 0.0224830253158865 0.0674490759476596 -2.8328611898017 -0.472143531633617 0.876837987319574 -0.876837987319574 -1.57381177211206 -0.652007734160709 -0.854354962003687 0.134898151895319 -0.292279329106525 -0.921804037951347 0.0674490759476596 0.179864202527092 0.179864202527092 -0.89932101263546 0.51710958226539 -0.157381177211205 -0.741939835424255 -0.944287063267233 -1.6637438733756 -0.112415126579433 0.786905886056028 NA 0.224830253158865 0.51710958226539 2.58554791132695 3.34997077206709 1.39394756958496 -2.96775934169702 -0.674490759476595 0.44966050631773 0.0449660506317731 1.03421916453078 0.134898151895319 0.96677008858312 -0.921804037951347 -2.20333648095688 -2.51809883537929 1.77615899995503 1.11649746994211 1.23130440772536 -0.324329599237682 0 0.68519696200797 -1.32756911389044 -0.663784556945221 -0.333182182392053 -0.333182182392053 0.625732391321661 -0.4030493562726 -0.575784794675142 1.42301099255428 0.268066840304801 0.579370267755537 0.269796303790638 NA 0.224830253158865 NA 0.711962468336406 -1.27403810123357 -0.374717088598108 NA 0.275 NA NA NA NA -0.0981077468329593 0.882969721496634 -0.728690909791679 -2.02347227842979 1.21784735 NA NA NA
RV0024 NA NA NA NA -0.674490759476595 0.245269367082398 0.459880063279497 1.34898151895319 -0.183952025311799 NA 0 0 1.6 -0.278361265815738 -1.43463113920419 0.149886835439243 -0.0214124050627491 0.578134936694224 1.26333189870219 1.62734278476893 -2.1840653164004 0.364010886066734 -1.52028075945518 -0.0214124050627491 0.299773670878487 0.278361265815738 -0.0642372151882471 NA NA NA 0.8 0 0 -1.47745594932968 0 -2.79431886068875 -0.417541898723607 0 0.160593037970618 0.674490759476595 -0.706609367070719 -0.160593037970618 -1.25262569617082 -1.12415126579433 -0.738727974664842 1.05991405060608 0.481779113911854 0.835083797447213 0.578134936694224 0.321186075941236 0.44966050631773 0.931439620229584 -0.385423291129483 0.44966050631773 0.353304683535359 0 -0.55 -1.73811080326661 -0.330069946126844 -0.990209838380534 -1.1337185106096 NA 0.762467815060499 -0.498536648308788 NA NA -2.52200892673857 NA 0.381233907530249 -0.557188018698057 -0.615839389087326 0.909096241033672 NA NA -1.46628425973173 -0.527862333503422 0.439885277919519 0.0586513703892691 0.439885277919519 0.234605481557077 NA NA 1.08505035220148 0.938421926228306 NA NA 0.850444870644403 0.381233907530249 0.469210963114153 1.524935630121 0.674490759476595 0.32258253714098 0.557188018698057 NA 0.762467815060499 0.205279796362442 0.0879770555839037 0.0586513703892691 0.586513703892692 NA -1.14370172259075 -1.08505035220148 -0.674490759476595 NA 0.645165074281961 NA NA 0.527862333503422 0.70381644467123 0.469210963114153 0.674490759476595 0.733142129865864 -0.293256851946346 -3.54840790855078 -1.11437603739611 NA NA NA NA -0.70381644467123 0.32258253714098 NA 1.90616953765125 NA 0.3 NA NA NA NA NA NA NA 0.55 0.55 0.25 NA -0.9 -0.6 1 0.4 NA NA NA 1.01173613921489 -2.79431886068875 0.939469272128115 1.10809196199726 -0.698579715172188 -0.313156424042705 -2.33662870247249 NA 0 0.620531498718467 0.593551868339404 0.0269796303790637 -0.350735194927829 -0.971266693646297 NA -1.24106299743694 NA -0.863348172130042 0.296775934169702 0.674490759476595 -0.674490759476595 -0.78240928099285 -0.0539592607581277 NA NA 0.296775934169702 NA NA NA 0.458653716444085 -0.377714825306893 -1.34898151895319 -1.21408336705787 -0.836368541750978 0 -0.998246324025361 -0.674490759476595 -0.512612977202212 -0.539592607581276 -1.80763523539727 -1.96951301767166 -0.188857412653447 2.2393093214623 -0.134898151895319 NA -1.02522595440442 NA NA 1.42992041009038 1.80763523539727 1.64575745312289 NA 7.04168352893565 -2.8328611898017 NA 1.48387967084851 0.161877782274383 NA -0.21583704303251 0.512612977202212 -1.61877782274383 NA 0.242816673411574 1.69971671388102 1.20980088604532 1.18838848098257 -0.12490569619937 -0.05 0.747408679420011 -1.05366394318236 -0.251566823804784 0.101173613921489 -1.45015513287468 0.505868069607446 0.0408782278470664 0.0613173417705996 0.776686329094261 -0.0613173417705996 0.331113645561238 NA 0.674490759476595 -0.262301962018676 1.34898151895319 NA -0.674490759476595 -0.0936792721495271 NA 0.324274403594517 NA NA NA NA NA 0.423613098939569 NA NA -0.674490759476595 -0.5414112875 -0.9603168775 0.7441480625
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RV2946C -0.333182182392053 -1.45462464995555 -1.73092206950018 0.105643131002358 -0.410559592724884 -0.32258253714098 -0.615839389087326 1.23167877817465 0.146628425973173 NA -0.864615671543823 0.484365847409367 1.47120467671069 0.337245379738298 -1.34898151895319 -0.871217230990602 -0.590179414542021 -0.871217230990602 0.309141598093439 0.786905886056028 0 0.281037816448581 0.196726471514007 -1.09604748414947 0.196726471514007 0.44966050631773 -0.224830253158865 NA -0.0326366496520933 0.0326366496520933 -0.249811392398739 0.0499622784797478 1.1491324050342 -0.156578212021352 -1.02378061706269 -2.58956273727621 -2.01142780058199 -1.19240330693184 -1.67418242084369 0.325200901890501 NA 0.156578212021352 -2.71000751575418 0.156578212021352 0.831068971497948 NA 1.02378061706269 -0.252934034803723 0.277022990499316 0.614268370237613 0.252934034803723 0.13248925632576 -0.0602223892389818 -0.469734636064057 0.734713148715577 -0.703397506311306 -0.0867202405041335 -1.61396003160471 -0.965040625097282 -0.653737197646546 -0.176405275555417 -0.321680208365761 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.337245379738298 -2.4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.939469272128115 -0.433601202520669 -1.72236033223488 -0.0160593037970618 -2.28042113918277 0.754787278461904 0.192711645564741 0.080296518985309 0.947498924026646 NA -0.0562075632897162 -0.590179414542021 0.0843113449345744 -0.0562075632897162 -0.168622689869149 -0.533971851252305 -1.03983992085975 0.337245379738298 0.477764287962588 -0.44966050631773 -0.365349161383156 -0.618283196186879 -1.37708530059805 -1.12415126579433 -0.590179414542021 -0.505868069607446 -0.618283196186879 -0.927424794280318 -0.337245379738298 -0.505868069607446 -0.0281037816448581 0.75880210441117 -0.393452943028014 -1.34898151895319 -1.82674580691578 -0.337245379738298 -1.03983992085975 -0.281037816448581 -1.40518908224291 -0.674490759476595 -0.505868069607446 -0.477764287962588 -0.0843113449345744 -0.393452943028014 -0.75880210441117 1.18035882908404 0.337245379738298 -0.843113449345744 -1.29277395566347 NA -0.730698322766312 0.140518908224291 0.168622689869149 0.505868069607446 1.99536849678493 NA -2.66985925626152 -0.562075632897163 0.140518908224291 0.618283196186879 2.58554791132695 -1.51760420882234 0.44966050631773 0.224830253158865 NA -1.06794370250461 0.590179414542021 1.07918521516255 -0.196215493665919 0.196215493665919 1.02238599331189 0.683990629328378 -1.13998438221396 0.113998438221396 -0.848552890954426 -1.02261502243226 0.848552890954426 -0.0778258568626841 -0.648548807189034 0 -0.299773670878487 0.179864202527092 NA 1.92711645564741 -0.289067468347112 2.89067468347112 0.674490759476595 -0.224830253158865 -2.24830253158865 -2.24830253158865 0.876837987319574 NA NA NA NA -0.674490759476595 0.171688556957679 NA NA 0.538710192489402 -0.551629021352281 NA 1.35942358517018
RV2947C -1.11247177212373 -1.97091455691213 -1.00735632908842 0.0788365822764851 -0.9535903840876 -0.674490759476595 -0.302357926661922 -0.0930332082036683 0.9535903840876 -0.372132832814673 -0.513897721505977 -0.835083797447213 0.513897721505977 -1.7833992962432 0.160048654791056 -1.39470970603635 -1.21179695770371 -0.43441777729001 1.6690788285353 1.60048654791056 -0.182912748332636 -0.045728187083159 -0.663058712705805 -0.205776841874215 0.960291928746339 0.411553683748431 -0.640194619164226 -0.242395116686901 0.660438868654166 -0.660438868654166 1.88295337020549 0.843113449345744 1.29277395566347 -0.469210963114153 0.293256851946346 -2.14077501920832 -1.14370172259075 -0.733142129865864 -1.55426131531563 -0.205279796362442 -1.96482090804052 -0.32258253714098 -3.87099044569176 -0.117302740778538 0.32258253714098 0.674490759476595 1.31965583375856 0.410559592724884 -0.32258253714098 0.381233907530249 0.645165074281961 0.586513703892691 -0.674490759476595 -1.20235309298002 -0.234605481557077 -0.29508970727101 0.548023742074734 -0.526431812274415 -1.27920661280044 -1.02336529024035 -0.279099624611005 -0.348874530763756 1.01843637854744 -0.786161415019078 -0.366279750179343 -0.402014359952937 -1.73312857401933 NA 1.20604307985881 0.536019146603917 0.205474006198168 0.25907592085856 0.857630634566267 1.44725169583058 -1.80459779356652 1.34898151895319 0.893365244339861 1.21497673230221 1.69739396424574 0.178673048867972 -0.491350884386924 -0.500284536830322 1.02737003099084 1.2953796042928 -2.80516686722716 -0.6432229759247 1.04523733587764 1.01843637854744 0.553886451490714 -0.0804028719905875 0.777227762575679 0.732559500358686 -0.714692195471889 -3.45732349559526 0.589621061264308 -0.134004786650979 -0.446682622169931 0.625355671037903 0.428815317283133 0.330545140405749 0.446682622169931 0.482417231943525 0.428815317283133 -0.768294110132281 0.884431591896463 -3.76106767867082 -3.43052253826507 0.723625847915288 0.652156628368099 0.571753756377511 0.670023933254896 0.544952799047315 0.893365244339861 -0.419881664839735 -0.938033506556854 -2.5818255561422 -0.491350884386924 -1.18817577497202 -0.982701768773847 -0.938033506556854 0.375213402622742 -0.687891238141693 NA -0.519737468341272 0 -0.410559592724884 -0.762467815060499 -1.20235309298002 0.32258253714098 1.11437603739611 NA 0.357083343252315 -0.0396759270280349 -0.436435197308385 1.38865744598123 NA 0 0.119027781084105 1.74574078923354 0.515787051364455 0.477331922091129 0.0933910282352209 -0.394317674770933 0.966434521041092 -3.49325811251311 0.68455778573744 0.996635599823626 0.0100670262608447 -0.0100670262608447 -2.16441064608161 NA 0 0.584558658213049 NA NA 0.0674490759476595 -0.337245379738298 1.14663429111021 -0.472143531633617 -0.134898151895319 -0.51710958226539 -1.14663429111021 -0.674490759476595 -1.30401546832142 -3.3274877467512 0.539592607581276 0.44966050631773 NA -0.44966050631773 -1.41643059490085 -0.269796303790638 0.292279329106525 -0.831871936687801 0.134898151895319 -1.55132874679617 -1.30401546832142 -1.03421916453078 NA -0.696973784792482 -1.5063626961644 -0.831871936687801 -1.14663429111021 -1.77615899995503 -1.88857412653447 0.112415126579433 2.45064975943163 -0.0224830253158865 -1.23656639237376 -0.337245379738298 NA -1.77615899995503 0.134898151895319 3.28252169611943 1.57381177211206 NA 1.86609110121858 NA -0.854354962003687 0.314762354422411 2.15837043032511 2.4956158100634 -0.741939835424255 0.382211430370071 -0.0674490759476595 NA -2.92279329106525 2.04595530374567 1.25455281262647 0.0494626556949504 -0.0944287063267233 -0.205448334783101 -0.105703775738869 -2.431186841994 0.246642143390695 -0.627433264629391 -0.627433264629391 0.752919917555269 -0.641985180706639 -0.772007495786464 -0.495710076241835 -1.46340405850726 -0.307134185118807 -0.687545419337433 1.07918521516255 0.174062131477831 0.583108140450734 -0.0595138905420525 0.138865744598123 -1.80525467977559 -1.32914355543917 0.399073699356986 -1.41532487234433 0.674490759476595 0.287487864694942 -0.674490759476595 -0.569828400247468 -0.255841322560088 NA NA 1.5352406999503 -0.200798407083225 -1.35980962217489 0.797922006589988
RV2948C -0.854354962003687 -1.10166824047844 -0.404694455685957 0.292279329106525 -0.500053494094717 -0.0814040571782098 -0.337245379738298 1.08151104536764 -0.267470473585546 -0.0348874530763756 -2.49958340276621 0.119027781084105 1.22995373786909 -0.725395722455961 -1.31080279671867 -1.03082550033215 -1.66713753757423 -0.903563092883741 1.48897016714645 1.48897016714645 -0.26725105564167 0.343608500110718 0.26725105564167 -1.23444535224962 0.725395722455961 0.26725105564167 -0.521775870538498 NA 0.29372984686884 -0.29372984686884 0.6 0.25 0.35 -0.314762354422411 -0.562075632897163 -2.90031026574936 -2.67548001259049 -2.60803093664283 -1.86609110121858 -1.07918521516255 -1.6637438733756 -1.30401546832142 -2.85534421511759 -0.696973784792482 0.089932101263546 NA 0.96677008858312 0.0224830253158865 0.652007734160709 1.01173613921489 0.786905886056028 0.786905886056028 -0.472143531633617 0.202347227842979 0.674490759476595 -1.15626987338845 0.385423291129483 -0.382211430370072 -0.721330395551359 -0.30914159809344 0.10304719936448 -0.00936792721495272 0.915380316432522 -0.481779113911854 0.497838417708916 0.546016329100101 -1.20444778477963 NA 0.62631284808541 1.20444778477963 0.0160593037970618 0.481779113911854 0.192711645564741 NA -2.68190373410932 2.79431886068875 1.50957455692381 2.00741297463272 1.81470132906798 0.321186075941236 -1.67016759489443 -1.47745594932969 NA 1.55775246831499 NA -2.00741297463272 1.01173613921489 2.23224322779159 0.546016329100101 0.674490759476595 0.337245379738298 0.62631284808541 0.305126772144174 NA -0.0321186075941236 -0.529957025303039 -0.690550063273657 0.192711645564741 0.240889556955927 NA -0.0160593037970618 -0.578134936694225 -0.224830253158865 -1.41321873414144 0.321186075941236 -5.36380746821864 -4.36813063280081 0.321186075941236 NA 0.738727974664842 NA 0.754787278461904 1.25262569617082 -1.10809196199726 -1.91105715185035 -2.58554791132695 -1.01173613921489 -3.64546196193303 -4.46448645558318 -1.7665234176768 0.417541898723607 -3.37245379738298 0.851143101244275 -0.00690604873184227 -0.674490759476595 -0.701470389855659 -0.134898151895319 -1.02522595440442 0.674490759476595 1.48387967084851 0.188857412653447 NA NA NA NA NA NA NA NA NA 0.897072710103872 0.330500472143532 -1.30176716578983 1.01635593893734 -1.42289831451227 0.70220955781125 1.23810632561457 0.110875193338618 -0.00923959944488487 -0.859282748374292 -0.364010886066734 -0.89932101263546 0.556722531631475 0.44966050631773 0.321186075941236 -0.171299240501992 -1.26333189870219 NA 0.23553645569024 -0.813671392384464 -0.0856496202509962 -2.29112734171415 NA -1.88429164552192 NA -0.406835696192232 NA NA -0.770846582258966 -0.728021772133468 -0.856496202509962 0.299773670878487 -1.99135367083566 -1.19909468351395 -1.77722962020817 NA -1.58451797464343 -1.1776822784512 -2.05559088602391 -0.835083797447213 -1.15626987338845 -0.792258987321715 -0.428248101254981 -1.60593037970618 0.149886835439243 0.556722531631475 -0.364010886066734 -0.406835696192232 -1.96994126577291 NA -1.0920326582002 NA 0.192711645564741 NA NA NA NA 0.149886835439243 1.15626987338845 0.599547341756974 2.59090101259264 -0.599547341756974 0.513897721505977 -0.299773670878487 NA NA NA 1.04677462022666 -0.170812594932384 0.170812594932384 -0.0817564556941327 1.8615944961554 NA 0.580062053149872 -0.95985223463977 -0.466955141176104 0.830142473201963 -0.0624528480996847 -0.187358544299054 -0.462151075937667 -0.903563092883741 0.649038277986912 -1.72033036405828 0.719962046632321 0.18946369648219 1.17467491818958 -0.289067468347112 0.289067468347112 -1.15626987338845 -1.31686291135907 0.351596246961204 -1.74835104759065 0.470368555950783 0.576867096920772 -0.843113449345744 NA 1.11497452076743 0 NA 0.810709018228915 -0.276599681525307 NA 0.950986016890267
[+] Show/hide bicluster #211 motif PSSM #1. bicluster 211 motif PSSM #1 Mycobacterium tuberculosis H37Rv 21x4
POSITION A C G T
1 0 1 0 0
2 0 0 0 1
3 0 0 0.4 0.6
4 1 0 0 0
5 0.2 0 0 0.8
6 0 0.4 0.6 0
7 0 0 0.4 0.6
8 0.6 0.4 0 0
9 0 0 0 1
10 0.6 0 0.4 0
11 0.2 0 0.2 0.6
12 0.6 0.4 0 0
13 0.4 0.6 0 0
14 0.2 0 0.8 0
15 0 0 0 1
16 0 0 0 1
17 0 0 0 1
18 0 0 0 1
19 0 0.4 0 0.6
20 0.8 0 0.2 0
21 0.2 0 0 0.8 [+] Show/hide bicluster #211 motif PSSM #2. bicluster 211 motif PSSM #2 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 1 0 0 0
2 1 0 0 0
3 0.2 0 0.8 0
4 0 0.8 0 0.2
5 0 0 1 0
6 0.2 0.2 0 0.6
7 0.6 0 0 0.4
8 0.2 0 0 0.8
9 0.6 0 0 0.4
10 0 0 0 1
11 0 0.4 0.4 0.2
12 0.2 0 0.2 0.6
13 0.4 0.4 0 0.2
14 0 0 0.4 0.6
15 0.4 0.2 0.4 0
16 0.2 0.2 0 0.6
17 0 0 1 0
18 0.2 0.4 0.4 0
19 0 0.8 0 0.2
20 0 0.2 0.8 0
21 0.2 0.4 0.4 0
22 0 0 1 0
23 0 1 0 0
24 0.2 0 0 0.8 |