Bicluster 218 (zzz

GENES 2867:::H37Rv..7H9.shake.replicate.4 2885:::Strain.1006...replicate.3 2885:::Strain.CDC1551..replicate.4 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs...0.5.mM.DNO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN...2hr.hypoxia.rep.2 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.3 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.3 4062:::MTB1254.Day.0.rep.3 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.2 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.6 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.1 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.2 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.6 4084:::High.iron.wt.vs.high.iron.ideR.KO.1b 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.2 4089:::MTB1254.vs..MTB1254.rep2 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.4 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.5 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.6 4099:::H37Rv.hypoxia.2hr.rep.1 4101:::H37Rv.Day6.1 4101:::H37Rv.Day8.3 4101:::NRP.Day6..2 4107:::DIPED..100ug.mL..DMSO..12h..1 4107:::DIPED..100ug.mL..DMSO..12h..3 4107:::DIPED..50ug.mL..DMSO..12h 4107:::DIPED.10ug.mL.vs.DMSO.12h.2 4107:::DIPED.50ug.mL.vs.DMSO.12h.1 4107:::DIPED.50ug.mL.vs.DMSO.12h.2 4107:::Palmitate.Glucose..1 4107:::X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050. 4107:::X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051. 4107:::X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046. 4107:::X0.05mM.Palmitate.10mM.Gluc..1 4107:::X0.12mg.mL.BZAvspH5.6..11h. 4107:::X0.12mg.mL.BZAvspH5.6..5h. 4107:::X0.12mg.mL.PZAvspH5.6..6h. 4107:::X0.1mMGSNO.5ug.mLKCNvsDMSO.6h 4107:::X0.1ug.mL.Mtmvsctrl..0.33h. 4107:::X0.2mg.mL.AmpvsEtOH..6hB 4107:::X0.2ug.mL.Mtmvsctrl..4h.B 4107:::X0.2ug.mL.Mtmvsctrl..6h. 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.5ug.mL..111895vsDMSO.6h 4107:::X0.5ug.mL.CeruleninvsDMSO..6hC 4107:::X0.5ug.mLRifapentinevsEtOH.6h 4107:::X0.5uMValinomycinvsDMSO.6h 4107:::X1.2mg.mL.PZAvspH5.6..10.5h. 4107:::X100ug.mL.TriclosanvsEtOH..6hA 4107:::X100ug.mLCephalexinvsEtOH.6hA 4107:::X10ug.mL.menadionevsDMSO..6h 4107:::X10ug.mL.methoxatinvsDMSO..6h.A 4107:::X10ug.mLmnd.Dubos.vsDMSO.6h 4107:::X1ug.mL..111891.DMSO..12h..2 4107:::X1ug.mL..121940.DMSO..12h 4107:::X1uM.ValinomycinvsDMSO..6h.B 4107:::X20ug.mL.methoxatinvsDMSO..6h 4107:::X25ug.mLCPZ.0.1mMGSNOvsDMSO.A 4107:::X2ug.mL.PA824.DMSO..6h..2 4107:::X4mM.H2O2.ctrl..2h...2 4107:::X4mM.H2O2vsctrl..1h. 4107:::X50ug.mL.TriclosanvsEtOH..6h 4107:::X50ug.mL.TriclosanvsEtOH..6hA 4107:::X50ug.mL.VerapamilvsDMSO..6h 4107:::X50ug.mLAntimycinAvsDMSO..6hB 4107:::X5ug.mL.CapvsEtOH..6h 4363:::H37Rv.hypoxia.4hr.rep.1 4363:::H37Rv.hypoxia.4hr.rep.7 4363:::H37Rv.hypoxia.8hr.rep.1 4364:::H37dosR.mutant.hypoxia.1.day.rep.3 4364:::H37dosR.mutant.hypoxia.4hr.rep.1 4365:::H37Rv.diamide.1h.rep.1 4365:::H37Rv.diamide.1h.rep.4 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.1 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.2 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4396:::Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4 4570:::MTB.strain.TB294.SigA.overexpression.vs.Ctrl..DS..rep2 4575:::Extracted.Lung.Surfactant.30min.rep.2 4575:::Purified.Human.SP.A.Coated.2hrs.rep1 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep2 4575:::Whole.Lung.Surfactant.30min.rep.1 4575:::Whole.Lung.Surfactant.30min.rep.3 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2 4583:::X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4583:::X5ug.ml.KCN.vs.DMSO.6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media.rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.3 4615:::AA_30uM_24h.AA_60uM_1h_01 4615:::AA_30uM_2h_01 4615:::AA_30uM_2h_08 4615:::AA_30uM_2h_09 4615:::AA_30uM_30min_07 4615:::AA_30uM_4h_01 4615:::AA_3uM_10min_02 4615:::Acetate.3mM.2h.05 4615:::Acetate.3mM.2h.06 4615:::Acetate.3mM.30m.05 4615:::Acetate.3mM.60m.04 4615:::CHP_25uM_1h_01 4615:::CHP_25uM_24h_01 4615:::CHP.AA.4h.1 4615:::CHP25uM_24h.50uMOA_30min_01 4615:::CK_LA_2h.2 4615:::CK_OA_NA_0.05_2h 4615:::CK.AA.2h 4615:::CK.for.AA.Na.4h.2 4615:::CK.OA_NA_2H 4615:::ETYA_3uM.AA_1h_02 4615:::Glycerol_1._10M_01 4615:::L2A_30uM_10min_06 4615:::L2A_30uM_2h_05 4615:::L2A_30uM_30min_07 4615:::MDA_1254.pMV261.3524_01 4615:::MDA_1254.pMV261.3524_02 4615:::MDG_1254.pMV261_04 4615:::MDG_1254.pMV261.3524_01 4615:::MTB1254_Bottom_10D_04 4615:::MTB1254_Pellicle_42D_01 4615:::MTB1254_Pellicle_42D_04 4615:::MTB1254.0485.1._ETYA_10m_01 4615:::MTB1254.0485.1._OA_10m_01 4615:::MTB1254.0485.1._PA_12h_04 4615:::MTB1254.0485.1._PA_30m_03 4615:::MTB1254.0485.14._01 4615:::MTB1254.3524.1._PA_12h_02 4615:::MTB1254.3524.1.T0_WtT0_01 4615:::MTB1254.B4.1._OA_10MIN_02 4615:::MTB1254vsMTB1254.0485.1. 4615:::MTB1254whiB4_SDS_90MIN_04 4615:::OA_50uM_2h_01 4615:::OA_50uM_2h_07 4615:::OA_50uM_30min_07 4615:::OA_50uM_4h_01 4615:::PA_10uM_2h_T0_01 4615:::PA_50uM_10min_T0_01 4615:::PA_50uM_24h.PA_100uM_1h_01 4615:::PA_50uM_3d_05 4615:::PA_50uM_4h_05 4615:::PA_50uM_4h_07 4615:::PA_50uM.OA_10uM_12h_01 4615:::PA_50uM.OA_10uM_2h_03 4615:::PA_50uM.OA_30uM_2h_01 4615:::PA_50uM.OA_30uM_2h_02 4615:::PA_50uM.OA_30uM_4h_04 4615:::PA_5uM_2h_T0_01 4615:::Rv.MT106_100603_01 4615:::Rv.MT90_100903_01 4615:::Rv.MT96_100503_02 4615:::Rv.MT96_100703_01 4615:::Rv.p0485.1._300uM.PA_10m 4615:::Rv.p0485.2._300uM.PA_4h 4615:::Rv.pMV261Km._300uM.PA_10m 4615:::Starvation_1254_3d_02 4615:::Starvation_1254_OA50_24h_02 4615:::Starvation_1254_OA50_6h_01 4615:::Starvation_1254_OA50_6h_04 4615:::Starvation_OA50_6h_02 4615:::TBD091 4615:::TBD1266 4615:::TBD622 4615:::TBD664 4615:::Test.6 4615:::Tet_500ng_30M_01 4615:::WM_1254.whiB4._10d_01 4615:::WM_1254.whiB4._10d_02 4615:::WT_WhiB4_OA_10min_01 4615:::X2.BA_500uM_30min_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.3 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak24hr.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.4hr.rep.2 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.3 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak24hr.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2 4703:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::H37Rv.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2 4729:::H37Rv.wild.type.vs.PepD.null.mutant..DS..rep.2 4731:::X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.2 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.3 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.2 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4802:::H37Rv.ctrl.vs.relE1.overexpression.72.hr.rep.1 4815:::H37Rv.reaeration.for.1hrs.rep.8 4815:::H37Rv.reaeration.for.4hrs.rep.7 4928:::Mtb.Erdman.strain.20.ppm.CO.rep.2 4928:::Mtb.Erdman.strain.200.ppm.CO.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.1 Raghavan_Nature2008:::Complemented.espR.mutant..R...rep3 Raghavan_Nature2008:::espR.mutant.complemented.with.WT.espR..R...rep2 Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages...IFNg.for.24hrs RV0069C 0.547228352028181 0.404694455685957 0.0337245379738298 -0.734445493652293 -0.554581291125201 -0.254807620246714 0.404694455685957 -2.02347227842979 -1.06419653161863 0.374717088598108 0.734445493652293 0.194852886071016 0.5545812911252 0.524603924037352 1.06419653161863 -0.983632357570035 -0.196726471514007 0.0140518908224291 -1.99536849678493 -0.44966050631773 -0.314762354422411 -0.224830253158865 1.40086542352831 0.812847838343589 0.155651713725368 0.75 0.25 0.7 -0.25 0.493529824007265 1.8096093546933 0 0.938421926228306 0.410559592724884 0.410559592724884 0.557188018698057 0.234605481557077 0.381233907530249 1.73021542648344 1.43695857453709 0.674490759476595 0.70381644467123 2.02347227842979 -0.205279796362442 -1.58358700051027 0.0293256851946346 -1.73021542648344 -0.909096241033672 0.293256851946346 0 -0.234605481557077 -0.850444870644403 0.410559592724884 0.410559592724884 0.997073296617576 -1.05572466700684 -0.674490759476595 3.40177948257761 -0.557188018698057 -1.34898151895319 0.557188018698057 -0.850444870644403 -0.0293256851946345 0.293256851946346 0.175954111167807 -0.263931166751711 NA -1.05572466700684 -0.909096241033672 -2.2874034451815 1.40763288934246 1.90616953765125 0.293256851946346 0.733142129865864 -0.879770555839037 NA NA NA -1.90240983442117 0.674490759476595 -0.275 -0.275 0 -0.15 0.029325685194634 -0.70381644467123 -0.38123390753025 0.733142129865864 -1.43695857453709 2.22875207479223 0.762467815060498 -0.850444870644403 -1.29033014856392 -0.429221392394197 0.919760126558994 -0.306586708852998 0.797125443017794 0.409512246825075 -0.0987059648014529 3.25729683844795 -0.164509941335755 0.296117894404359 -0.592235788808718 0.314762354422411 1.03421916453078 1.48387967084851 -1.61877782274383 0.314762354422411 0.134898151895319 -0.44966050631773 -0.7935185405607 0.178541671626158 -0.119027781084105 0 0.71416668650463 0.7935185405607 0.198379635140175 -0.31740741622428 0.357083343252315 0.515787051364455 -0.039675927028035 -0.753842613532665 -0.436435197308385 -0.95222224867284 -0.039675927028035 -1.62671300814944 -1.90444449734568 -0.753842613532665 -0.47611112433642 -0.674490759476595 -2.3805556216821 -0.674490759476595 0 0.277731489196245 -0.595138905420525 3.37245379738298 -0.515787051364455 3.92791677577547 0.87287039461677 0.198379635140175 0.833194467588735 0.753842613532665 0.436435197308385 0.912546321644805 1.03157410272891 -1.50768522706533 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