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[+] Show/hide bicluster #219 rows and columns.
bicluster 219
Mycobacterium tuberculosis H37Rv
6x146
[+] Show/hide bicluster #219 rows (genes).
bicluster 219 genes
Mycobacterium tuberculosis H37Rv
6
[+] Show/hide bicluster #219 rows (short gene names).
bicluster 219 short names
Mycobacterium tuberculosis H37Rv
6
short_name
[+] Show/hide bicluster #219 rows (long gene names).
bicluster 219 long names
Mycobacterium tuberculosis H37Rv
6
long_name
[+] Show/hide bicluster #219 rows (NCBI RefSeq gene IDs).
bicluster 219 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
10
[+] Show/hide bicluster #219 gene upstream sequences.
bicluster 219 upstream sequences
Mycobacterium tuberculosis H37Rv
6
upstream
[+] Show/hide bicluster #219 columns (arrays; conditions).
bicluster 219 arrays
Mycobacterium tuberculosis H37Rv
146
[+] Show/hide bicluster #219 ratios.
bicluster 219 ratios
Mycobacterium tuberculosis H37Rv
6x146
GENES 2867:::H37Ra..Dubos.media.replicate.4 2867:::H37Rv..Youman.media.replicate.4 2885:::Strain.1843..replicate.1 2885:::Strain.M3061a..replicate.1 2885:::Strain.M3061a..replicate.4 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.3 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.1 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.4 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.1 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.2 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration.rep2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.3 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.2 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5 4084:::High.iron.wt.vs.high.iron.ideR.Complement.1b 4084:::High.iron.wt.vs.low.iron.wt.1b 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.5 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3 4099:::H37Rv.hypoxia.2hr.rep.2 4100:::H37Rv.0.2..Oxygen..2h..2 4101:::H37Rv.Day14.2 4101:::H37Rv.Day14.3 4101:::H37Rv.Day24.2 4101:::H37Rv.Day6.1 4101:::H37Rv.Day60.2 4101:::H37Rv.Day8.3 4101:::NRP.Day10..2 4101:::NRP.Day12..3 4101:::NRP.Day14..2 4101:::NRP.Day14..6 4101:::NRP.Day14..7 4101:::NRP.Day20..2 4101:::NRP.Day6..2 4101:::NRP.Day8..2 4107:::Dubos.NRP.1vsDubos.log.phase 4107:::pH5.2vspH6.8..10.5h. 4107:::pH5.2vspH6.8..2h. 4107:::pH5.6vspH6.8..5h. 4107:::WT.t.0h.WT.t.6h..1 4107:::WT.t.0h.WT.t.6h..2 4107:::WT.t.6h.WT.t.0h..1 4107:::X0.1ug.mL.RifpvsEtOH..6h 4107:::X1.2mg.mL.PZAvspH5.6..10.5h. 4107:::X1.2mg.mL.PZAvspH5.6..6h.A 4107:::X100ug.mL.Ceph.DMSO..6h 4107:::X100uM.DCCD.DMSO..6h 4107:::X10ug.mL.Amikacin.EtOH..6h 4107:::X10ug.mL.EconazolevsEtOH..6h 4107:::X10uM.ValinomycinvsDMSO..6h 4107:::X1mM.DNP.DMSO..6h..1 4107:::X20mJ.UVvsctrl..6h. 4107:::X20ug.mL.methoxatinvsDMSO..6h 4107:::X20ug.mL.Procept6776vsDMSO..6h 4107:::X20ug.mLProcept6778vsDMSO.6hB 4107:::X25ug.mLCPZ.0.1mMGSNOvsDMSO.A 4107:::X2mM.DTTvsDMSO..6h.A 4107:::X2ug.mL..121940vsDMSO..6h 4107:::X2ug.mL.PA824.DMSO..6h..1 4107:::X50uM.CCCPvsDMSO..6h 4107:::X5ug.mL.KCN.DMSO..6h..2 4107:::X7d.Dubos.NRP.1vsDubos.log.phase 4363:::H37Rv.hypoxia.1.day.rep.10 4363:::H37Rv.hypoxia.12hr.rep.3 4363:::H37Rv.hypoxia.4.day.rep.3 4364:::H37dosR.mutant.hypoxia.1.day.rep.4 4364:::H37dosR.mutant.hypoxia.8hr.rep.3 4365:::H37Rv.diamide.1h.rep.4 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.4 4396:::Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.2 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.2 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.6 4583:::X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1 4583:::X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.1 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.3 4615:::L2A_30uM_10min_07 4615:::MTB1254_Bottom_14D_02 4615:::MTB1254.B4.1._PA_4h_01 4615:::MTB1254.B4.1.Compl._PA_30MIN_03 4615:::MTB1254.B4.1.Compl._PA_4h_03 4615:::OA_50uM_2h_08 4615:::OA_50uM_4h_01 4615:::Rv.MT96_100703_01 4615:::Starvation_T0 4615:::X2.2..Dipyridyl_1mM.Dpd.AA_50uM_01 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.2 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.4hr.rep.2 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3 4731:::X10ug.ml.Ethambutol.vs.DMSO.12hrs.3 4731:::X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.2 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.1 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2 4802:::H37Rv.ctrl.vs.relE1.overexpression.72.hr.rep.1 4802:::H37Rv.ctrl.vs.relE1.overexpression.72.hr.rep.2 4802:::H37Rv.ctrl.vs.relE1.overexpression.72.hr.rep.3 4815:::H37Rv.reaeration.for.4hrs.rep.5 4815:::H37Rv.reaeration.for.6hrs.rep.3 4815:::H37Rv.reaeration.for.6hrs.rep.4 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.1 4860:::M..bovis.nadABC.null.nicotinamide.starvation.rep.2 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.4 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2 Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages...IFNg.for.24hrs
RV2608 0.144533734173556 NA 0.674490759476595 -0.317407416224281 -1.4680093000373 0.722668670867781 -0.529957025303039 -1.34898151895319 NA -3.13156424042705 -0.529957025303039 -0.481779113911854 0.819024493650151 1.92711645564741 1.73440481008267 -0.433601202520668 -1.49351525312675 -1.10809196199726 0.529957025303039 1.58987107590912 -1.25262569617082 -0.433601202520668 -1.9752943670386 0.175 0.475 -0.168622689869149 -0.993000284784987 1.25530224680366 NA -1.14288712022423 -0.505868069607446 0.955528575925176 0.24356610758877 0.505868069607446 0.0562075632897163 0.468396360747636 0.843113449345744 0.0936792721495271 -0.131150981009338 -0.0187358544299054 0.0562075632897163 2.30451009487837 1.25530224680366 1.81737787970083 3.42866136067269 2.22956667715875 1.85484958856064 -0.430924651887825 -0.318509525308392 -0.131150981009338 -0.32940246393043 NA 1.76915609043041 0.0442289022607604 0.464403473737984 0.287487864694942 1.63646938364813 -0.331716766955703 -1.37109597008357 -2.03452950399498 -0.973035849736728 -3.18448096277474 -0.995150300867108 -1.17206590991015 0.685547985041785 -0.0442289022607603 NA -0.472143531633617 1.88857412653447 0.573317145555106 0.775664373398084 2.69796303790638 2.86658572777553 0.404694455685957 -1.31525698097936 -0.876837987319574 -1.28153244300553 NA -0.843113449345744 NA -3.67597463914744 -4.38418993659787 -1.14663429111021 0.775664373398084 -0.708215297450425 NA -0.269796303790638 -0.0337245379738298 -3.13638203156617 -1.51760420882234 -1.28153244300553 -0.404694455685957 -2.42816673411574 -1.39167080752766 -1.28067865723404 0.61472575547234 0.882026377777086 -0.134898151895319 0.0499999999999999 1.05 -0.183952025311799 -0.65 0.210087285738612 -1.5590688046918 -1.31580984225762 0.807177466258876 1.36003874451838 0.824377594915839 -1.82362316451079 NA NA -1.43329286388776 0.983632357570035 -0.702594541121453 -0.646386977831737 -1.01173613921489 NA 2.33261387652322 0.393452943028014 -0.365349161383156 1.18035882908404 0.441907738967424 0.21160494414952 0.674490759476595 0.674490759476595 1.22791907494457 -1.64299031154555 NA NA NA 2.30846837398328 NA -0.645991149921246 0.541492581551633 1.13048451236218 -1.44095753160909 NA -0.429221392394197 -0.894732640122014 0.812141934879982 NA NA NA NA NA 0.5
RV2819C 1.10048492335655 0 -0.173440481008267 -0.847931240484863 NA 1.19568816452669 NA -1.77820291134739 -1.87017892400329 -2.45269367082398 -2.11544829108569 -0.183952025311799 1.28766417718259 0.122634683541199 0.153293354426499 -0.367904050623597 -0.613173417705996 -0.766466772132495 0.674490759476595 NA -1.31832284806789 -1.68622689869149 -1.53293354426499 NA 0.2 -0.481779113911854 -1.05991405060608 1.25262569617082 2.08128577209921 -2.08128577209921 -2.33181091133337 -0.423965620242431 0.115626987338845 0.404694455685957 0.770846582258966 1.1948122025014 NA 2.54379372145459 0.520321443024802 0.211982810121216 0.751575417702492 1.48387967084851 0.289067468347112 0.751575417702492 2.10055693665568 3.17974215181823 2.89067468347112 NA -1.1177275442755 -0.404694455685957 -0.95 -0.925 1.07075408066909 0.3962633211925 0.834682314852286 0.918993659786861 2.65580736543909 1.57662215027654 -0.784095507891542 -1.12134088762984 -0.851544583839201 -1.44172399838122 -1.55975988128963 NA 0.177053824362606 -0.564886011061648 -2.30451009487837 -0.365349161383156 0.730698322766311 1.23656639237376 NA 2.19209496829893 NA 1.29277395566347 -0.927424794280318 -0.365349161383156 -0.786905886056028 3.40055757902783 -3.73780295876613 0.871217230990602 -4.29987859166329 -2.30451009487837 -0.224830253158865 1.43329286388776 NA -0.281037816448581 NA 0.44966050631773 -3.2881424524484 -2.72606681955124 -0.89932101263546 -0.75880210441117 -1.91105715185035 NA NA NA 0.95940495960033 -0.063960330640022 -0.786905886056028 0.421556724672872 -0.709080029193343 0.192711645564741 2.65299698727461 -3.46238589864652 -1.39394756958496 0.674490759476595 2.1583704303251 0.55886377213775 -0.481779113911854 0.410257266073393 -0.938724252879798 -1.06988189434219 1.02336529024035 -1.0931401963931 -1.00010698818943 -1.39549812305502 NA NA 1.88392246612428 1.34898151895319 1.32572321690227 0.491816178785017 0.757081464718627 1.17003499092879 0.396129493660858 1.524935630121 -1.15347695098896 -1.05670218984667 0.0674490759476594 -3.6647331264895 NA -0.736433788408119 -1.53481060574776 NA 0.282184909576943 -2.772906455626 -6.07041683528936 -2.26329121513258 NA 1.01173613921489 NA NA NA NA -1.04038254086512 0
RV2820C 0.2 1.9 0.908497757662353 -0.52307446653287 -1.54169316451793 0.745489786789921 -0.603491732163269 -1.70397665551982 -2.73346255156304 -2.09447130574311 -1.98797276477312 -0.425994163879955 0.922987355073235 1.45548005992318 1.2424829779832 -0.461493677536618 -0.674490759476595 -0.177497568283315 0.106498540969989 0.745489786789921 -0.709990273133258 -0.958486868729898 -1.34898151895319 -0.981077468329593 1.71688556957679 -0.153831225845539 -0.532492704849944 1.12415126579433 1.73947616917648 -2.75712889400082 -1.17148395066988 0.745489786789921 1.3371483477343 0.532492704849944 0.437827335098843 0.65082441703882 2.14180399061866 4.39010652220731 1.66847714186316 0.24849659559664 1.26614932042098 1.52647908723651 1.02948589604322 1.38448103260985 3.20678940031855 3.3487874549452 2.99379231837857 0.20116391072109 -1.17148395066988 -0.0591658560944382 0.674490759476595 -0.726374664051718 0.616677265807173 0.655219594920121 0.79011774681544 1.05991405060608 2.37035324044632 1.09845637971903 -0.79011774681544 -0.597406101250698 -0.346880962016535 -1.69586248096972 -1.21408336705787 -1.17554103794492 0.327609797460061 -0.211982810121216 -1.01173613921489 -0.643832088591295 1.19568816452669 0.827784113903094 1.80886158223269 1.56359221515029 2.45269367082398 0.705149430361895 -0.183952025311799 0.459880063279497 -1.34898151895319 NA -3.67904050623597 1.53293354426499 -4.35353126571257 NA -0.367904050623597 2.26874164551218 -0.490538734164796 -0.858442784788394 NA 0.367904050623597 -2.11544829108568 -1.41029886072379 -0.245269367082398 -1.22634683541199 -1.65556822780619 -1.4863777847725 -1.76117031641111 1.21158525313388 1.26250834466132 -0.432365871459356 0.309141598093439 1.93916093349521 NA NA 1.63001933540177 -1.43329286388776 -0.168622689869149 0 0.786905886056028 0.89932101263546 -0.835083797447213 1.25046039678245 -1.38687425824963 -2.57893525682228 0.595138905420525 -1.03157410272891 -0.515787051364455 -1.42833337300926 0.07935185405607 0.912546321644805 NA 1.4680093000373 1.26962966489712 -0.0529012360373801 0.674490759476595 0 0.552960892904236 0.269796303790638 -0.622606854901472 -0.674490759476595 -0.0337245379738298 -2.8328611898017 NA -2.128861459598 -3.37245379738298 NA 0.463712397140159 NA NA -1.20733845946311 NA NA NA -0.0554375966693091 -1.09027273449641 0.32398811293844 0.201671881778431 0.224830253158865
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